| Id Trinity | FTRINITY_DN55010_c1_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_67977 |
| Sequence | TTTGGAAAGAGCTACTCTAAAGCCTATTCTATTGGTAACTTTTCAGTCGAAAGGCTTTCAGTTTCAGAGATAACTTTTCTCAGGCCAAGACCGTAGGAAT AAAAAAAACCACTTCTCATTCAGGAGCGGGAAAGGAAAGATGAATTAAGCGGTCATCGAGATCTTTACAGAAAAGAAAAGCATTACAGTAAATTCAAAGC CATGAACAACAAAACAAAAAGGGGATTGACTGAGAAGTAGAGCTTAGCGATCAGGATAAAGTTAAAGCAAGGAATCCTAGACATCCCTCAGGCTCGTTTA AATAAATTATGGGAGTAGTAAGATTTTAGAGTATGACATTCTCGATGAAAGCAAGGAGTTGACCCGGGAGGTTTTTCTCCCTCAACTGAATGCGCCTTAC CGGACATAGAAAATAGGTAATGGAAGAAAGAATGTCTTAGAATAGAATCGAAAAGTTTACCGAGTCCAAATTGAATGATCGAAAGTGCAAAATGGGTAAA GGAAAGGCGCCGTTGGGTTAAAACAAAGAAAGCTATCTAACTAGAGTCTAGAGCTCCTCTAGGCCAAATAGACTGAGACATCCCCCGAAGAAAAAGGAAG AAGCGCTCAAAGCGTTGATCAGTTGCTATTGGACTTCTTTCCTTACTCTACTTCTTAGAGAGGAAAGCCAGTGAAACTGGTGTTGACTTTGACCAGGTAA GCAGATCCGTGCTCGAGATCTTGGATCGAGAGTTCAATAACTACCCCCTAGCCCTAGGGAAGCAGCCTCTCTCTGTCCTCCAAGACATCTCTCATGCCGT GCCAAGGCAGCGAAACCTTTCGCCCGGCGAAAGCGGTAATCTCTTTCCCGTTCCCGGCTTTTTAAGCTGTTAAACCAGCTTAGGAAAGATGAGCACTCGC AGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACTGATTCAACGAGATATGCCTGCATTAAGATTTAAAACTTGTCGTCTACTTTTA GGAAATGTTTGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAGATTGAGGAACAAGAAGAGATCTATTAAGAGAAAGATTTATTCGAGAG AAAATCTTAACAGTTACATCCAATTACAAACTACACGAAAGTTGTCCCTTTTTTATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAAC TTCATATATCCCTTTTCTACTCAATCTAGAAACAAGATTGGACGTTATTCTGGTTCGTCTCCATTTTTGTGAAACTATTCCTCAAGCAAGGCAGCTGATA AGTCATCGAAGGGTTTGTGTGAATAATCGAATGGTAAGCATTAGTCCTTTGAAAGTTTCCCACGGTGATCTAATATCTTTTCAAGAAAATGACGCGAGAA TCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATTAGTTGAAAAAATAATAGGAAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAAC CAAAACAGAATGGTTCCACCTACTCAAAACTAAGCGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAACAGTTGCGTTATTCTATGCAAGAA GAATACTTAGAAAGAACAAAGAAGGTTGGATCCGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTAA AATCCATATTCTTATCGAAGAGAAGAAACGATAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTCTAGTTTACAACTCTTCTTTATATAGTAATTC GACTTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGAAGAATCAAAAGGATCGAACTACCTACTCATTATTTGGAGGTGAATTATAGAACACTA AAAGCGGTGGTCTTTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATTTAAACCTTCTTCTTTGGAGCGGAAACGGACGTGGCC AAAACATATAAAGATCGGCGTAGTCGCTCATAGGGACATATCTATCCGGATAGAGGATAGTCTAGATCGATTCATAGATAGATTTCTATCCATATATATA GGTATCTCCGTGGATAGAGATAAAGATAGGGATCCATCTAGATCTTGCTTGATTAACTATTTCCATTTTTTTTTCTTGATTCTTATTTTTTGCCTTTTTG ACGACAAGTTTTAAATCTTAATGCAGGCAAGGTACGTAGTTCTCGACCGTAAGGGAGAAGGAAACATCTTATTATATTACTTGCTGGGTCGGAGCGTAGA CGAGCGAGCAGAGCCCAGGATACAGGGAAGCCCGTCATAGAGCAGTCGACTAGAAGTAGAAGACTGCTGGCCTGAGAGAAGGCGGCCTCCCACTATAGTC CGAAACATGGGGGCCCAATGTAGCCAACCAAGCAGCCCCTAACACAACATCATCTCCTGAAACCGGAAGCAAATAAACTGGTAACCGGATAGTATGGCCT CCCACTATAGTCCGAAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_47765; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_67977
| Blastp | Ribosomal protein S4, mitochondrial from Arabidopsis with 83.01% of identity |
|---|---|
| Blastx | Ribosomal protein S4, mitochondrial from Arabidopsis with 82.74% of identity |
| Eggnog | ribosomal protein S4(ENOG410YEHI) |
| Kegg | Link to kegg annotations (ArthMp027) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421110.1) |
| Pfam | S4 domain (PF01479.24) |
| Rfam | Intron_gpII (RF00029) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |