Id Trinity | FTRINITY_DN55018_c1_g3_i1 |
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Name Transcript | Ll_transcript_67435 |
Sequence | GTGACGTGTCCACGCATTCAATCAGAATTCAGCAACACCTGAATCTCCTCCTCTCACAAAAACATTGGAATACCCTTTATGCCCTTCTTCTCCTCTCACA AAAACATTGGAATACCCTTTATGCCCTTCTTCTCTCTCGAATTTCCACATTCATCATCACATATTCACATTCAACACTTGTGCAGCTACTCCTACCACTA ACCCTTTCTCATATATTCTCTCTCTCTTCATTACCCACTTTCTCTCTCCTTATAAAGCTCTCTTTTTTAACCTTCATATCTCTATCTCACCCCATTCTAT TCAACCCCCACTTCCTAAAATATTGGTTTTCTTTCATACAATCAACTTGTATCAAACTGCGATCAATGCACTTCAACTCTTCTTCTGTTCCCCTCATAAA AATCGTTTTTTTATACTTTTAGGTGGAGTTATAAGGGCACAGTTAATCGTTTGACTTCACTTTTAGCCTTTTGGACCGTACTTTATCTCCTTTCAATTCT TCGCCATTTTACCTTATTAACTTTATCTGGGGTTGTTATGTCTGTTGGGTATGTTTTGGGGCTTTATTTCAATGACTCGTGTTTGAGAACTGTGTTTTTG TATTAGGGTTTTCCTTATCCCAATCTGGGGTTTGAGGAAAAACCCATCATTGATTTTGTTTTGTTGATGTTGTAAAGAGGGGATTTTTGTTTTTATTGTT GTTGTTTCTGGTGAAAATGTCTGAGGATATTGCACCTGTTTTTGTGGAGTGGGAGGAGCAAGTGATATGCCCGGAGCGTGGGAACCGTGCAACTCATTTT TACTTGAAGGATGCATTTGGGAATTCGGTGCTTGCTGTTGTTGGGACTGAGAGAAGTGTGAGGCACATGATGTATATTGTACCTGACAATTTTATGAAGG TTTATGGATCCAATGAGTCTATCAATGCATTTAAATGGAGGGCGAGGAGGGAGGTTGTCAACTGGCTCACTTGTTTGATTTCGCGGAATCATCCACCGTG TGCGGGTGTTCAGCTGGATGATTCAGAACAAGCTGCAGAATCTCTCAAACTATTAAAAGCTGAAATCTATGTTAAGGAAAAGCTTTTACCTGATAAATTG ATTTCAAGGAAATTGGAACTTCAAAGATCAAATATTGAGTGGTCTGGCACTGCTTGGTTTTGTCATAAACAGCTGAAGCACTACCCAGGGTTTTTCAGAA ATAGGTCAATCATAAATGTTCATTCGTTTGTATATATCATGGCCCAAGAAGAAAGACACTATCTTGGTTATGTAGAAGATATGTATGAAAACAAGAAGAG ACAGAAAAAAGTGAAGGTACGGTGGTTTCACCATGCTCAGGAAGTTAAGCATGTGATTCCAGAGCTGAATCCACAGGAGGGAGAGGTTTTCATCACGCCT CATGTTCAGGTGATCAGTGCAGAGTGTGTCAACGGTCCTGCAACAGTTCTGAATCCCAAGCATTATGAGAAATACCTGGCTGATGTGCCACATACTTCTT TATCTGGGGTCCATATATGCTCTAGGCAGTTTAAAAACAACAAGCTTAAGCCCTTCTCACTTACTAAGTTGCATGGATATAGTAACCAACCCGTGCTTTC TTATTTGTGTAGTCCTATTCTGTCCAAGAGAAAGGCCAATTGTCTTAAATCACACATGGAAGATGATGAGGACTTCACTCAAGATGATCCCTTAATGTCC AGCAGTAAGAAGAAGAGGTGTTCTAAGGGGCATCAAGTGCTTGAAAAGGGTTCTTATGATCTGAAAAACTCTGCTCCTTTGAATGAGATGACAAAATGTG AACCGAAATACCCAAGTTTGAAATTGAAACTATCAAAAACAACAATGGGCATCAAGGGTAATGGACCCAAGCCTCAGTGTGAACTGTCCTTTATGGTAGA TGAAAAGGTAGAGGTTCTCTGTCAAGATAGTAGCATTAGAGGATGCTGGTTTAGGTGTACAATCTTGACTGCAACTCAGAAGCGACTGAAGGTCGAATAT GATGACGTGTTGGATGTAGATGGACCAGAGAAACTAGAGGAATGGGTCCCTGCATCTAAAGTGGCTGCTCCTGACAAACTGGGTATGCGATGTTCAGGGC GCTTAACAGTACGACCATGCCCTCCGGAAAATACTACAGATCATACTTTTGAGATTGGAGCAGCAGTTGATGCCTGGTGGAGTGATGGATGGTGGGAAGG TGTTGTAACTGCTATCAATTTTTGTGGAGTTGGAAACCTGCAGGTTTATTCCCCTGGTGAAGACAAGTTCCTGACGGTTGAGAAGAGGAACGTTCGGACT TCGCGAGATTGGGTTGGTAAGAAGTGGGTTGACATACCGGGAAGGCCTAACATTTGCAGCTATATATCTTCAAATGTCAGTTCCAGCATCAGACTGACAG CTAATTCTGCAGCAGTAGATGGATCCATATCTGATTTAGAAAGTAAAACAGTTCCCAAAGTTGAAGTTGCTCAAAAGGTTGAGCCAGAATTGTCTATTTC GGAAGCACCTGATGACCCGCTGGAAATGATGAAGGGAACGACCTTGATGAATCCACTCCACACCATTTATGAAGGCAAAGATTATAACTCTGATGGTGGC TGTGAAGGTCACAACGACATTGTTGATGCTGATATGAAGCTACTTTGTGCCATTGATGTAGACAAGGATAATAACTCTGGTGGTGGCACTGCCGGTGACA CTGGCAATGATGATGGTCATGGTGGCAATGGTGCTGATGACGCTCAAGACACAAGTGAGGGAATTTTGAAGGAAGAAAATTTTGATTCTGCTGAACCAAA ACTTGATGTAGCAGAAGTAACACAGGTTGCATGATTATATGGTAGAGCTAAATGGAGAATTTTTTGGTCCCTAACTGATATTACCGGAAGGTGGATTCAC CTTGTATATAAAACAAAAGGAAGCCATGGAGTAGTAGTATATGCAGAGGATAGTGATTGTCAAGTACTGAAGCTTCTGATTTAAGGATAATGGTGGTGTA TAGCCTATGATTTTGGGTAGAGTCGTTCATTAGATCAAACATCATATACAATTATGGTTGTTAAGATGCACATATCAATTGGAACTGCATACCACAGATT TAGCTTTGAGCAGCAAAGTTTGTAGTTGTAGATTTTAAGTTCTTTTAACCATGAACCTTTCAAGATTTTATCTAGTAAATTTTACAAAATCTTGTTGGCA TCATATTGTTGTAACTGCATGTTGAAATTCCTCTATTTCAAATTACTCAGATTTCACTAAGTGAGAGCCTCGTGCATATGGTATTTATTTTGTTATTGGA TAGGCATTGTGTAACAAATTATTTCTTAG BLAST |
Tissue | flowers |
Gene name | LI_gene_47824; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_67435
Blastp | DUF724 domain-containing protein 3 from Arabidopsis with 29.25% of identity |
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Blastx | DUF724 domain-containing protein 3 from Arabidopsis with 29.25% of identity |
Eggnog | Protein of unknown function (DUF724)(ENOG410YXA1) |
Kegg | Link to kegg annotations (AT1G26540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440001.1) |
Pfam | BAH domain (PF01426.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |