| Id Trinity | FTRINITY_DN55018_c1_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_67448 |
| Sequence | ATTAGGTCAAACAGAATCATCGAATGGCAAGAAACACGTCACGTGTCCTCACACATAATCAGAATGTGCAGCACCTGAATATCCTCGCAAAAATACTTGA AATCCCCATTATGCCCTTCGTGCCTTTTTTGTTTTTCTCTTCAGTTTCCACATTCATCACATGGCACTGCAACTTCAGAATTCTACACTTGTGCAGCTAC TACTGCATACCCTTTTCATATAATCTCTATGCAACTCTCACCCATTATTACCCTTTCCCGCATTCTTAATAAAGCCACCTTTTTTTCTCTTTTGGGTTGT TATTTATTAACTCTCTTAACACACAAGAACTGATTTTTATTTTTTAGGTAGGGGCATTAGGGCATAGTTCATTGTTTGACTTTAGTTTTAGCCTTTTGGA GCATACTTTATTTCATTTCAAATCTTGGGTATTTTACTTTTTTCTTTATCTGGGGTTGTTGTGTGTGTTTTGGGGGTTTTATTTCAATGGTTTGAGTTTG AAATTGTGTTTTTGTTTTAGGGTTTTCCTTAACCCAATTTGGGGTTTTGAGGAACAACCCATTATTGCTTTTGTTTTGTTTATGTTGTAAAGAAGGGATT TTGTTATTATTGTTGTTGTTGTTATTGTTGCTGGTGGTGATAATGTCTGAGGAGATTGCACCTATTTTTGTGTCATGGGAGGAGCAAGTGATATGTCCGG AGCGTGGGAATCGTGTGACTCATTTTTACTTGAAGGATGCATTTGGGAATTCGGTGCTTGCTGTTGTTGGGACTGAGAGGAGTGTGAGGCACATGGTGTA TATTGTACCTGACCATTTTTTGCAGACTTATGGATCCAATGAGTCCATCAATGCAGTCAAATGGAGGGCGAGGAGAGAGGTTGTCGACTGGCTAACTTGT TTGACCTCGCAGAATCATCCATGTCATGCAGGTGATCAGGTGGATGGTTCAGGACAAGCTGTAGAATCTCTCGGGCTTTTGAAAGCTGGAATCCATGCTA ATAAAAAGCTTTTACCTGCTAAAATGATTTCAAGGAAATTGAAATTTCAAAGGTTAGATATTGAGTGGTTTGGCATTGCTTGGTTTTGTCATAAACAGCT GAAGCACTACCCAGGGTTTTGCAGGAATGGGACAACCATAAATGTTCATTCATTTGTACATATCATGGCTCAAGAAGAAAGACCCTATCTTGGTTATGTG GAAGATATGTATGAAGACAAGAAGAGGCAGAAAAAGGTGAAGGTACGGTGGTTTTACCACGGTCAGGAAGTTAAGCATATGATTCCAGAGCTGAATCTGC AAGATGGAGAGGTTTTCATCACGCCTCATGTCCAGGTTATCAGTGCAGAGTGTATCAATGGTCCTGCAACAGTTCTGACTGCTCCCGATTATGAGAAATA CCTGGCTCATATGCCACATACTTCTTTATCGGAGGTCCATATGTGCTCTAGGCAGTTTAAAAACAATAAGCATAAGCCCTTCTCACTTACTAAGTTGCAT GGATATAGTAACCAACCCATGCTTTCTTGTTTGTATAGTCCTATCCTCTCCAAGAGAAAGGCTGATTGTCTTAAACCGCTCATGGAAGATGACGAGAACT TCACTCAAGATGATCCTTTAATGTCCAGCAGTAAGAGAAAGAGAAGTTCTAAGGAGCATCAAATGCTTGAAAAGGGTTCTCTTGATCTGAAAAACTCTGC TCCTTTGAATGAGATGACAAAATGTGAACCAAAATACCCAAGTTTAAAATTAAAACTATCAAGAAAAACGATGGGTATTAAGGCCATTGGATCCAAGCCT CAGTGTGAACTGTCTTTTAAGGTAGATGAAAAGATAGAGGTTCTTTGCCAAGATAGTGGCATTAGAGGCTGCTGGTTTCGGTGCAAAATCTTGACTGCAT CTCAGAATCGACTGAAAGTCCGGTATGATGATGTGCTGAATGTAGATGGACCAGAGAAATTAGAGGAATGGGTCTGTGCATTTAAAGTGGCAGCTCCGGA CAAACTGGGTATGCGAAGTTCAGGCCGCTTAACAGTACGACCATGCCCTCCTGAAGATACAACAAATCATATTTTTGAGATTGGAGCAGCAGTGGATGCC TGGTGGAGTGATGGATGGTGGGAAGGTGTCGTAACTGCAGTCAATTTTTGTGGAGCTGGAATCCTGCTGGTTTATTCCCCTGGCGAAAACAAGTTACTAA CAGTCGAGAAGAAGAACATTCGGATTTCTCGAGATTGGGTTGGTAACAAGTGGGTTGATATACCAGGAAAGCCTAACATTTACAGCTATATATCTTCATA TGTCAGTTCCAGCATCAGACTGTCAGCTAATTCTGCCACGATAGATGGACCTATATCTAATTTCGAAAGTAAACCACTGTCAGATCCCAAAGAGGAAGTT GTTGAAAAGGTTGAGCAGGAATTGTCTGTTCCGGAAGCACCTCATGACCCGGAGGAAAGTAGGAAAGGATTGACCTTGAGGAAGCCACTCCATGCCATTC ATGAAGACAAAGATTATAGCTCTGATGGTGGTTGTGATCATCACAGTGGCAGTGTTGATGCTGATATGAAGCTACTCTGTGCCATTCATGAAGAAGACAA GGATGACAATTCTGGTGCTGGCAGTGAAGGTGACATTGACAATGACGGGGGTCGTGGTGGTGGCAATGATGGCACTCAAGAGATAACTGAGGAAATTTTG ACGGAGGAAACTCTTGATTCTGCTGAACCAAAAGTCGATGCAGCAGAAGCAATACAAGTTGCGTGAATATATATGGTAGAGCTAAATGGAGATGTTCTTG GTCTCCAAATGATTATACATGAAAGTGGAATCACTTTGTATATAAAATGAAATGAAGCTGTGGAGTAGTAGTATATGCAGAGGATAATGATTGTCAAATA CTGGAGTTTCTGATTTAAGGATAAATGTTAGTATATAGGCTATGCTTTTGGGTAGAGTTGTTCATTAGATCAACATCATATAGGATTATATTACTTTGGC CAATGATTAGAGCATGTGGTTGTTGGATGCACATATCAATTGAACCTGCATACCATAGATTTAGCCATGAGCAGCAAAGTTTGTAATTGAATATTTTTAA CTTGTTTTGACCATGAATCATATGGATGTAACTGCAACATCTTGAGATTTGTCTACTCTAAATTACCAGGGTAATTAAAGTGATTATGTGTTTAGCCTAT ATCATGTGAACTGAGTTATCTGGCTATAGAACATGGCCTCACATTGTTTGACTATGAATTGGATTCTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47824; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_67448
| Blastp | DUF724 domain-containing protein 2 from Arabidopsis with 29.82% of identity |
|---|---|
| Blastx | DUF724 domain-containing protein 2 from Arabidopsis with 31.54% of identity |
| Eggnog | Protein of unknown function (DUF724)(ENOG411077K) |
| Kegg | Link to kegg annotations (AT1G11420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426049.1) |
| Pfam | BAH domain (PF01426.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |