Ll_transcript_68848

• Id Trinity: FTRINITY_DN55033_c3_g1_i22
• Name Transcript: Ll_transcript_68848
• Sequence: AAAACCACACGTCGTCGTTTCATTTCATTTTCATTCTTCTCAACACACACATTCTCTCTCTCTCTGCGTTTTGGAGCTTAGTAGTGTCGTTTTTCAGATC AGAGTTTTCTCGCCATGAACGGAAACAAAGCTATGGAAGACGCCAACGTTGAAGTGATAGAGTGCAACGAAAAAATGGTGTACATGTGGGGATACCTTCC CGGAGCTTCATCGGAGAAGATTCCGATACTCTCTCCGACGCAAGTTACGCTCTCTCTGCCTTCAGATTCGTGGAAAGATGTGTGCGGAGGTGGCTGTGGA TTCGCTATGGCAATCTCAGAGAAAGGGAAGCTCATAACGTGGGGTTCTGCGGATGATGAAGGCCAAAGCTATTTGGCTTCAGGGAAGCATGGGGATATTC CAGGGCCTGTTCAGCTTCCCACTGAGGCTTCAGTGGTAAAGGCTGCTGCTGGTTGGGCTCATTGCGCCTCTGTTACCGAAGAAGGTGAAGTATATTCATG GGGCTGGAAAGAATGTGTGCCTTCTGGAAAAGTTATTATTGATTTCACTACTGGGGGAAGCCTGCAAAAGGATGTTGCTGGGAAACAAAGCTCACCAGTA GCTGAACAAGGAAGCCCACAAAGCTCAAACACTAGTAGCGGGTCGGATTCTCATCATGATAACAAGAAAGTTGGAGCAGATGTTGTGAAGAGAAGGAAGA TCTCATTTGCCAGACCGGAATCTGACAGTCCAGCATCTGGAGATGAATTCTTTACTATGTCCCCTTCTCTTGCTACCCTTGGTCATGGGGTGAAAATTAC CTCCGTTGCAGCTGGTGGGCGTCATACCTTGGCTCTGTCAGGTTCTATGAAGTACGAAGATATCGAAGGTTTTTGATGTAATGCAAGACACATGATGCAT CATAATTTTTACCAAAGTTTTCAGATGTGGGACAGGTCTGGGGTTGGGGCTATGGAGGCGAAGGACAGCTAGGTTTGGGTTCTCGTGTAAAGATGGTATC ATCTCCTCATCTCATACCTTGTATTGAGTCAGCTGCTGGGAAGGATAGGTCATCAACTTTTCAGCAAGAAAGCAGTGTGGGAGCTCAAGTTTCAAAGGTT CCTGGAAGTTATGTTAAGGAAATTGCTTGTGGAGGTCGGCATAGTGCTGTGGTTACAGATGCCGGAGCTCTTCTTACTTTTGGCTGGGGTCTCTATGGCC AGGTGAGTTTCCTGTTGACAAATTCTTTTTTTATATTTTTCATCTTCTGTTAGGGGAAAGACATTTATTTTTATTGCTATGGTTAAGTTGGAAATTGATC TTGCTGAAAACTCCAGTAGTGAAAATGGAATTTGTGATGCCTATTATTTATCATAAGTATTGTCTAAAGATGAAGAAGTCCCCTTAAAGATTTTAGCATT CCTTTTCCAACCAAAGGCACCAGAATGCAGCAGATGCAGCATACTGCCAAAAAATTAGCTCCTTCTCAAAAGCCCTAACCTCTAAGTTTAATATGGAGAA GCTGATGCAATTCCTTAGGGCAAACTCAATCATGTCCATAGATTCTAAAAAGCTTAATCTAAAGAAAATTCCAAGAACAAGAATGCAAAAGAAGGTAGTT TCATTTTCTGAACTTGAACAACACATTACACACATTAGGAGATAAAGCAGTGAAAGCTCTACTGTTTTGTAGCATGTCTTTAGTGTTAATGTTAAGAATA AAAGTCCAGACAAAATGTTTTGATCTAAATAGAAGCTTTGGACATTTAGATCCAAGTCTTTTTGAGGAAATAGTAGAACTACCAAGTACCAACCAAGTCT TATTCTCACTAGTTGGGGTTAGTTGCATGGATCAAGCAATGCTATTAATATAAGCTTTATTCCCACTAGACGGGGTCGGCTACACATTATAAATATAATG CTTTATTATAAATTATTTTCATTTACAAAGTTTATCTCTAAATCTTAATTGTTCCGCATATGGTTTTTCTTGTTTTTCCTATTTGAGATGTTACACCACA CATGTCTATAAAGATTTTGCTAAGTGCCAAATATTTTTTAAACCAAAAGGTTCCGATGAAGTTGGAGTTTCAGAAGTACCTTGGACTTCTCCTGACTTCA AGTGTTCCATTTCATTTTAAATGGCATATATGTTCTTATTAATGAATTTCTGAGGAGGAAGATTATCTCATTTAATGTTATGTATTGTTATGAAGCACAT GTGTAGGAACCGTTTCTTTTAAACCTTTTTGCATGTAAATTTACTCCAGTGTGGGCAAGGGAATAATGCTGATCAGCTGAGACCAACTCTAGTTCCTTTG TTATTGGGAACTGATGTGGGAAAAATTGCTGCGGGACTTTGGCACACATTGTGTGTTACAGAAGATGGTCAAATCTATGCATTTGGTGGGAATCAGTTTG GACAATTGGGTACTGGTAGTGACCAGACTGAGACTTCACCTAGACAGTTGGAGGCTTCTCGTTTTGAGAATAAGCGTGCTAGTATAGTTTCTTGTGGAGC ACGCCATAGTGCTTTGCTAACAGGTATGTTGCCATTAGAACTGAAGGGGAAAGTTTAAAGCCAATCTGACTGTGTATTTTGATGGTGCTATGACTTATTA AAATTGAATAGACCAAAGATATTTGTGCCAAGAACCATTCTATGGGCTATGCAAATTTCACGACAATTTCAACTATGATGGACTGTGCACACAACTTGAA AGGGTAATTCCTTACCCATAGGGTGAGGGGATGCAAAAAAAGAATCGCATACTTTCAATGTGGGATTCAAGTCCAATACCTTGCAATTGGATCCTAGTAT CCCACCATGCTCTGCAACCCTGGCACCCATGCAGGCTGGCTGTGCACTAGCCCTTTGACTAGTCCCGGGCAAAAACTGCAATGCTGGCGTTGCCACCGGT GATGCTCTTCTCAGCCGTGAGATATGGTGGGTAGCTCTGATACCAATTGATAAGAAAACCTTGTGAGAGCCACACCACGAAAGATAGCCATCGTAGTTGG AGAGCCCAAGGCCTTATAAATCCCACACTATGGATTCAGGTGCGGTACCTTGCAGTTGGATTATGATGGTCACATATTTACTTGGGGATGGAACAAATAC GGCCAGCTTGGTCTGGGAGATTCTATTGACAGAAACATCCCTTGTGAAGTTCCTATTGCTGGTTGTCGACCAAGAAATGTTGCCTGTGGTTGGTGGCATA CACTGCTGATAGTGGACAAATCTGTTTGACAAAATTTGTTATTAGCATCAAGGTGGGTTGCACAGTTTTGATAGGTTACTGACTAGTCCTCATTTCATCA GTGGAATGCAGATATGTCCAAAATCACCAAACATGTTTCCTGGTTTGTTTTCTTCCCTTTCCATTTCTAGATTGTAGCTTAGCTGACATGTATTTATGGC TTTCTTACAGACAATAAGGGTTGCAATAGTGTTTATTATATGGTTGTAATTTACAGCACTTGTTGCGCCCTTAAATTGAACCTTTGCGTGCAATGATGTG ACAAAATATTCTAAGTTTTAAATGTGTCACTATACTGATGTTCTAAACTCTTGAGAGTCTTAATTTGAGTCTTGGTGAGTGGAATACTAAAATGGTGTCA AAGAAACAAAAAAGTTTATAAGTTGGTACATTTGACCTTTTTTTATGATGTAACTGACATACCTAATGGAAATAAGACTTTGTTTTTGTTTAAAAA
• Tissue: flowers
• Gene name: LI_gene_47961;
• Additional information: details;

Expression of Ll_transcript_68848

FPKM

• FPAB: 2.7
• FPNAB: 1.1
• LF1: 0.4
• LF2: 1.9
• LF3: 1.6
• LF4: 1
• UF1: 1.1
• UF2: 1.5
• UF3: 1.8
• UF4: 2.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_68848

• Blastp: RCC1 and BTB domain-containing protein 2 from Mus with 30.77% of identity
• Blastx: RCC1 and BTB domain-containing protein 1 from Mus with 40.45% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (105670)
• CantataDB: Link to cantataDB annotations (CNT0000795)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460943.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF13540.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;