Ll_transcript_68850

• Id Trinity: FTRINITY_DN55033_c3_g1_i24
• Name Transcript: Ll_transcript_68850
• Sequence: AGGAAGCCCACAAAGCTCAAACACTAGTAGCGGGTCGGATTCTCATCATGATAACAAGAAAGTTGGAGCAGATGTTGTGAAGAGAAGGAAGATCTCATTT GCCAGACCGGAATCTGACAGTCCAGCATCTGGAGATGAATTCTTTACTATGTCCCCTTCTCTTGCTACCCTTGGTCATGGGGTGAAAATTACCTCCGTTG CAGCTGGTGGGCGTCATACCTTGGCTCTGTCAGATGTGGGACAGGTCTGGGGTTGGGGCTATGGAGGCGAAGGACAGCTAGGTTTGGGTTCTCGTGTAAA GATGGTATCATCTCCTCATCTCATACCTTGTATTGAGTCAGCTGCTGGGAAGGATAGGTCATCAACTTTTCAGCAAGAAAGCAGTGTGGGAGCTCAAGTT TCAAAGGTTCCTGGAAGTTATGTTAAGGAAATTGCTTGTGGAGGTCGGCATAGTGCTGTGGTTACAGATGCCGGAGCTCTTCTTACTTTTGGCTGGGGTC TCTATGGCCAGGTGAGTTTCCTGTTGACAAATTCTTTTTTTATATTTTTCATCTTCTGTTAGGGGAAAGACATTTATTTTTATTGCTATGGTTAAGTTGG AAATTGATCTTGCTGAAAACTCCAGTAGTGAAAATGGAATTTGTGATGCCTATTATTTATCATAAGTATTGTCTAAAGATGAAGAAGTCCCCTTAAAGAT TTTAGCATTCCTTTTCCAACCAAAGGCACCAGAATGCAGCAGATGCAGCATACTGCCAAAAAATTAGCTCCTTCTCAAAAGCCCTAACCTCTAAGTTTAA TATGGAGAAGCTGATGCAATTCCTTAGGGCAAACTCAATCATGTCCATAGATTCTAAAAAGCTTAATCTAAAGAAAATTCCAAGAACAAGAATGCAAAAG AAGGTAGTTTCATTTTCTGAACTTGAACAACACATTACACACATTAGGAGATAAAGCAGTGAAAGCTCTACTGTTTTGTAGCATGTCTTTAGTGTTAATG TTAAGAATAAAAGTCCAGACAAAATGTTTTGATCTAAATAGAAGCTTTGGACATTTAGATCCAAGTCTTTTTGAGGAAATAGTAGAACTACCAAGTACCA ACCAAGTCTTATTCTCACTAGTTGGGGTTAGTTGCATGGATCAAGCAATGCTATTAATATAAGCTTTATTCCCACTAGACGGGGTCGGCTACACATTATA AATATAATGCTTTATTATAAATTATTTTCATTTACAAAGTTTATCTCTAAATCTTAATTGTTCCGCATATGGTTTTTCTTGTTTTTCCTATTTGAGATGT TACACCACACATGTCTATAAAGATTTTGCTAAGTGCCAAATATTTTTTAAACCAAAAGGTTCCGATGAAGTTGGAGTTTCAGAAGTACCTTGGACTTCTC CTGACTTCAAGTGTTCCATTTCATTTTAAATGGCATATATGTTCTTATTAATGAATTTCTGAGGAGGAAGATTATCTCATTTAATGTTATGTATTGTTAT GAAGCACATGTGTAGGAACCGTTTCTTTTAAACCTTTTTGCATGTAAATTTACTCCAGTGTGGGCAAGGGAATAATGCTGATCAGCTGAGACCAACTCTA GTTCCTTTGTTATTGGGAACTGATGTGGGAAAAATTGCTGCGGGACTTTGGCACACATTGTGTGTTACAGAAGATGGTCAAATCTATGCATTTGGTGGGA ATCAGTTTGGACAATTGGGTACTGGTAGTGACCAGACTGAGACTTCACCTAGACAGTTGGAGGCTTCTCGTTTTGAGAATAAGCGTGCTAGTATAGTTTC TTGTGGAGCACGCCATAGTGCTTTGCTAACAGGTATGTTGCCATTAGAACTGAAGGGGAAAGTTTAAAGCCAATCTGACTGTGTATTTTGATGGTGCTAT GACTTATTAAAATTGAATAGACCAAAGATATTTGTGCCAAGAACCATTCTATGGGCTATGCAAATTTCACGACAATTTCAACTATGATGGACTGTGCACA CAACTTGAAAGGGTAATTCCTTACCCATAGGGTGAGGGGATGCAAAAAAAGAATCGCATACTTTCAATGTGGGATTCAAGTCCAATACCTTGCAATTGGA TCCTAGTATCCCACCATGCTCTGCAACCCTGGCACCCATGCAGGCTGGCTGTGCACTAGCCCTTTGACTAGTCCCGGGCAAAAACTGCAATGCTGGCGTT GCCACCGGTGATGCTCTTCTCAGCCGTGAGATATGGTGGGTAGCTCTGATACCAATTGATAAGAAAACCTTGTGAGAGCCACACCACGAAAGATAGCCAT CGTAGTTGGAGAGCCCAAGGCCTTATAAATCCCACACTATGGATTCAGGTGCGGTACCTTGCAGTTGGATTGTGAGTCGTGACACTTAGCTCATCCTTTA ATTAGTATCTTTCATGCTTGGAAATCTTGATCAGGACATATTTACTTAAAGTTTGATGAAAACCCATCATAGTTTGTGGACAAGAAAAGTTTTACTTGCA TTCTAAGAAAACAAAATACTAAATACAACACAAACTTTAACATTATTATAAAAAAAAACTACACTATATCATGTTTCACTCATGATCTTATGATAACTCT TCACTTTTTTCCCCTTTTCATATTGAAGATGATGGTCACATATTTACTTGGGGATGGAACAAATACGGCCAGCTTGGTCTGGGAGATTCTATTGACAGAA ACATCCCTTGTGAAGTTCCTATTGCTGGTTGTCGACCAAGAAATGTTGCCTGTGGTTGGTGGCATACACTGCTGATAGTGGACAAATCTGTTTGACAAAA TTTGTTATTAGCATCAAGGTGGGTTGCACAGTTTTGATAGGTTACTGACTAGTCCTCATTTCATCAGTGGAATGCAGATATGTCCAAAATCACCAAACAT GTTTCCTGGTTTGTTTTCTTCCCTTTCCATTTCTAGATTGTAGCTTAGCTGACATGTATTTATGGCTTTCTTACAGACAATAAGGGTTGCAATAGTGTTT ATTATATGGTTGTAATTTACAGCACTTGTTGCGCCCTTAAATTGAACCTTTGCGTGCAATGATGTGACAAAATATTCTAAGTTTTAAATGTGTCACTATA CTGATGTTCTAAACTCTTGAGAGTCTTAATTTGAGTCTTGGTGAGTGGAATACTAAAATGGTGTCAAAGAAACAAAAAAGTTTATAAGTTGGTACATTTG ACCTTTTTTTATGATGTAACTGACATACCTAATGGAAATAAGACTTTGTTTTTGTTTAAAAA
• Tissue: flowers
• Gene name: LI_gene_47961;
• Additional information: details;

Expression of Ll_transcript_68850

FPKM

• FPAB: 0
• FPNAB: 0.8
• LF1: 0.1
• LF2: 0.4
• LF3: 1
• LF4: 0
• UF1: 1.2
• UF2: 0.1
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_68850

• Blastp: Ultraviolet-B receptor UVR8 from Arabidopsis with 31.43% of identity
• Blastx: RCC1 and BTB domain-containing protein 1 from Mus with 40.45% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (AT5G63860)
• CantataDB: Link to cantataDB annotations (CNT0000795)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460943.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF13540.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;