Id Trinity | FTRINITY_DN55036_c0_g3_i14 |
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Name Transcript | Ll_transcript_68666 |
Sequence | AAAAATTCTCTTTTACACAACATCTTCTAGAGGATCGTACAATCTACCAAACTAAGTTGCAGTATACCTTCAAAAATCTAGTGGCTAGAGCTATTCCTTA GGAGGAGGAAGAAGAAGCAAAGGAAAGCGTTGAACCCTGGTAAAATCTCCATTCTAAATTTACCCTTATGTTTTTTTTGCTATGTGAATAGGAATTGAAA ACAATGTAGTTTTTCTTCAGTTCAGTAGTTCTGATCCATGTGATTTAGGGTAAAGTTTTGTACATTAAGTCAAATGTTGATTTTCTCTCGTGCTTGATTC ATATAACATTATATCTGTGGTTTTAAGAACTGATTTGTTTTCCTAGGTGATTTTCCTGTTTCTGATATTTTGATATTGCGTAGTCATGCTGAGACAGTTT TGTTTCAGTGTTTTAAGATTTACTGAGATGTCAGAGAACACTCATCATCGCCATTTGTGTTGTAATTTAAGGATCAGTTATTGGATACCACTTTGATTTG TGCCTATGATTAACTTGATGGAAAGGGAATAAGATCAATCAATCTTGAAGTACTGTTGGGAGGGGAAGGGGGATATAAAGAGTCCTAAGGATCTTCTAAG GAAAAGTAGGGGAGTATGTGAGTTCCATGTTCAAACTTCGAAGATGATCAAGATTTGATACCATACAACTAGTTTTTGTTGTTTTGATTTGGGCAAGACA AATTCTTAACTGTTGAAATTTGTACATCAAATGGGTCTGAAAAAGCAATTTCCCAGCAGGATGTTGACTCGATATCCATAAAATTCTTCCAAGCTCAACA GCAGAGACAGTTAAAATGCATCCAGCACAGGTCATTTTATGGGGATCAACTTTGTGTGTCATGTTAGCGGTGCACTTTTCTATGAAACTACTCGCAGGAC ATGTTTTAAACTGGAAAAGGCCAAAGGAGCAAAAAGCCATTGTAATTATCATCCTTATGGCCCCATTATATGCTGTGGACTCATATGTTGGTTTGATAAA CTTTTTCGGAAGCGAAGCATTCTTTACATTTTTAGACTCAATTAAAGAGTGCTACGAGGCTCTGGTGATAGCTAAGTTCTTAGGTTTGATGTACAGTTAT TTGAACATTTCCTTGAGTAAGAACATTGTGCCGGATGAGATCAAAGGAAGAGAGATTCACCATTCATTTCCGATGACTCTTTTTCAGGTGGTTGATGCTT ATCAATTTTTTGTAATGTTCAAATTAAAAAATGTCTTCTGTCTTTGTGCCTTTTGCATGATTATGATTGCAGAAATGTTGCATCACATATATGAATAAGT TTTTGGAGTTATGGGTTTGTGGTCTCTTGGACCATGTACAATGAGAAATGAGTTGCTTTATTATTAGCATTACTAATTAGGATGCTATTTTCACTGCCCT CTGACTAGCAATGAGTCTGCATTGGTCCAGAATGTATTGTGATTCTTAATGTCACAACTAGTGCCAAAATCATGCTTAGACCATATTAAATGTTTTCTTT CAAGGTAAAAACTTGGTTTTGGTAATAATTTTGTTGTGGAAAAAGAAAAATATTTCATTAGAGGACAATGATTATATTTATTTTAGTAAAAGCATTATGT CCAGTTTTTTTTCTTTCTAATTGATCAAAATTTCTAGAGTTTTGAAGTTTAGTCCGACAAGTAGAATACATGTTTTCAATACTAAACCTTTCTCAATCAC ATGAACCCAATTTTTCTTCTGTCCCGATCGCGAGGAAGGAATGGATCTAGTCATTTGGTTCTGCTGCCTACATCACGCAGAAAATTGATTGTCCTTCATA AAGATGTCTACAATCGCCAGAAAGTCTAAGTATAATGTGCTTGATTCATCATTTAAGCTAATTAGACCGATCAATGTATTATTTTTACTTCCTTAATTAT TTCTACATATAACTGTAAAGATAAAACTCATCATGGCCATCATATGCAGCCTCATACTACTCATTTGGACCATCATACACTTAAGCTTCTAAAATCCTGG ACCTGGCAGTTTGTTGTGCTGCGCCCAGTGTGCTCTATCTTGATGATAACTCTACAATACTTTGAAGTATATCCGAGTTGGGTGGACTGGACAATCACAA TCGTCCTAAACATTTCAGTGTCACTTGCACTGTATTCTCTTGTTGTTTTCTACCATGTGTTTGCTAAAGAGTTGGAACCACATAAGCCTCTTGCCAAATT TTTATGCATAAAAGGGATTGTCTTTTTCTGCTTCTGGCAGGGAATTGTGCTCAACCTCTTGACGAAATTTGGAATAATTCGATCCCGTTTTGCCTGGCTA CCTGTGGAACGCATTGAGGAAGGCTACCAAAATATTTTGGTCTGTCTTGAAATGGTTTTCTTCTCTATTTATCAAATGTCTGCATACAGTGTTGCACCAT ATAAGGTTGATGACAAAGCCAGTGTAACTTCAGATAAAAAGTCAAAGTGATAGTAGGACATGGCCTACTCTGTTGAAGTTATCAATGCAATTAATTTTCA ATACCAGCTTCTTGAAACTTCTCTGAGGGAACATTGGTGAAATATGTAATCTATTGAATAAGATCTAGATACATTGATGTTACTTATAATGATCTTGGAT GTTTTACTCAACATTTGTTCCTAGATGCTCAGCTTTCATTGTATTTATACAAGTCTCAATTGATACTAGGTTCAATTCCTTTTGTTCGTTTTGCATAAAC AGCAACCCTTTAGTTGCAAGTTATTTATATTATAACCTCATTATCATGGCCTC BLAST |
Tissue | flowers |
Gene name | LI_gene_47992; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_68666
Blastp | Transmembrane protein 184 homolog DDB_G0279555 from Dictyostelium with 36.69% of identity |
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Blastx | Transmembrane protein 184 homolog DDB_G0279555 from Dictyostelium with 37.42% of identity |
Eggnog | transmembrane protein 184B(ENOG410XQ3V) |
Kegg | Link to kegg annotations (DDB_G0279555) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453606.1) |
Pfam | Organic solute transporter Ostalpha (PF03619.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |