| Id Trinity | FTRINITY_DN55040_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_68856 |
| Sequence | CACCATTTGACTTGTTACTCACACTTCACTTCTCTTGGAAAACCTCTGCTACTCACACCTTCCATGGTTGATTTCAAATGACAAATATGACGTGGCGTCT TTGTACTGAAATCTAGGGTTTCAATCTCTATGGCAGTCATATTCTATTACTATTACTCACTCAGCGCTCTGCATTAAGTGAAATAAAGCTTCAAGGCTTG AGAAGCAAGATGAGTGGAAGTGGCACAAAGCGCTATTCAAAGTGGGATTTGAGAGATGAACCTGAATATGCATGTGATAGTAAGCAATTGTGGTCTGGGC AGTCCTCTGCGGATATTGCTGGTAGTAATAGTCCAAAGTCATCCTATATGGAAAGAAATGATAGGTTAAAACCCACAATGGGATTTTCAAGTAAGGAACC TTTTTCTAGAGGCAGAGGTTCAAATAAGGATGATATTTTGAATAAAGACTACAAAGTTTCAGATGCAACTATTGCATGGGACACTGATGGAAGTCACAGC ATGAAGATGTCTCCAGGGTTTGAGGATAGGAAACACAAGAGGCATAGTCAATCCCCAAAAAATGGTCTCAGAAGGCCTGCCAGGAGTAGTCGGAGCAGGA GCCCCGCATGTGGTCTTAGGTTGGATTCAGGAGTCAGTGGCAGAAATAGAACGGGAGCTGGAGGATTGACACAAAAATGTAGATCTTTTGCCTCTGGGAA ATGCAGAAGAGGCAGCCATTGCCATTTCCTTCACCACAATGATCAAAATTATGCAGATAATGGGGAAATTAGACACAGGCAAGATGGAGCTCCCAGATAC TCTGCTCCCCACGAGAGTGGGGATTATATCCTTAGGAGTGGAAGATCTAATGAAAGTTGTATTAATTTTGCAAAAGGAGGGTGTAGAATGGGAGCATCAT GCAAGTACGTGCATCATACAAATTCTGATGGCTTCAGTAAAGTTTCTGTGGATGAACCACCTAGAGAAAGGGAAATTGGTAGGAGGTGCATAGAGAATTC CTTTGAGCAGGGCAACAGTTATGGTGTAAACCATAGTGGTGATACTCCTTGCAAATTTTTTCCATCCGGAAATTGTCGAAATGGTAAACATTGTCGGTAT TCTCATGATAGGCAAGTGTGTATGAGCCCTAATAGAAGATTAGGGGATGATAGGTCAAGGAGTAATCACGGTGGAGATCAGGTGTTGGATAGACCAAAAT TGAGTGATTCAGTTAATCATAATGAAAGGATAAGGTATGATAGATGGAATACAGATGGCAATATGGCTGATGTAGATGAAGTTTGGGGCTGTCCAAAACA GAACGATTTAGTTGCTAGCCCTGGTACAGCAAAGCAGGTTGAAAACAATAAAAATGGAATTTTGGGTGCCCCAGAACTTGGATTCACTGCTCAACCACTG GGTGATGGATGGGACCATAGTTTAGATAAGGACATACTACATTGCGAATCACCATTTTCAAGTGATGAGAAAGAAACCAACTGTTTGATATCAGAAAATA CTTTTGCCAACATTCAGACTTCTCAGTCTATAGGTGCAGGCATTTGGCCTGGTGATGAGGAAATGTCTCCAGATTGGAAATATGGTGTGGGGTCTTCCAG CCATCTTGAAGTAAAGCACGGGGAGAATAAGCCACAAGTTTATCCAGGGCAAGGATTTAATCAGAATGCTCAGAATGTGAATTCTTCAAGCCGTCATGTA TTTGGTCAAAGTCAACCGGAAGTTTCTATTGTTCGTCCAAGAGTAGGAACTGTTGACGGTATGCAGAACAAGGAAATATCTACTGATAAAAGGTACACTG TTGGGCCGGATATCATGGATGCAATCATATCACAAGCTGGTTCAAGAAACCCTCCAACTCAGAACATTGTGAGTAATGAACAGCTTGCTCAACTTACCCG CCTCACAGCTTCTCTGGCACATATCCTTGGAACAGGTCAGCAGCTCCCACAACTGTATGCTCCTTTAAATTCTCATGATGCAAAGGACACTTCCTTCCCA GGCAGAACAGAAGGGTCTGGTAAGCCAGTATCGACAACATTCATCAAGCCAGCTCCTGCTGTTGGATTCCAGAAGCAGTATGATCCAGTTTGTGATAGTA TTGAGACAAAGAATGCTAATGCATGGGAAGGTCCCCCGGGCTTTTCTCCAATTAAAAAAATTGCAGAAGATGCTGTAGAGATTCTACCGCTGCTGTCTAA CTCAGGGAGACAAAATTTAATTCAGTCGCATCTAGGTGAAAACGTTGAGGTTAATAGGGAGAATAATGAAGTGGTAGTTGAAGAAATGCAGGTTTCTCCA TGTGATAATAAAACTAAAAAAGAGAATGGTCCTTTGGAAAGCACGGACCAAAATGGTGGACATGATGAGGGGAAGAAAAAGGATGTGAAGGGGATCCGAG CATTTAAACATTCATTGGTGGAGTTCATTAAGGAGCTTCTGAAACCGGCATGGAAAGAAGGTCATATTACCAAAGAAGATTATAAAGCAATTGTGAAGAA AGTCTCCGATAAAGTAACTGGCACAGTGCAGCGGTTACATATTCCTCAGACACAAGAGAAAATTGACCACTATTTATCATCATCAAAACCAAAGCTTAAC AAACTTGTACAGGCATATGTGGAAAAGGCTCAAAAAGCTTAGTCCAAGTGTAGAAAATTGGCTCTGTAATCTCCTAACTGTTTATTTTCCTTGTTTATTG TGTGTCTGTATCCTTGCTACAAGTATTGTCCCTAGTTCAGCAGTGAAGTATAATGGACAAACTTTTTAGCTCGTGTACATATAATAAAGAGTTTAAAATC TATGCATCGTCGGTATAAAGTTTTTTACACTATCAGCATACCATTGATTTGCATTACTTTTGTTTGAAAATCAATGGTAATTAACATATGAATGATATAT AATTTGCTGACGGTATAAAAAACATTTATATTGTCAGTGTATACATATTAAATCCTATAATAAATTAGGAGACATGAAGTGGGGTTCATTTTATGTGTTA CTTTCATTTTACTCTTTGATGCAAATGAGGGAAAGTTGCATATTTTCTTTTCAAAACAGTGGGAAAGAAACTTTTCATTTGTGTTTCTGGATTCTGTTGC AAAAATTCCTCCCTGACAAGGCAACTCAAGTATGCAGTTTCATTTGACTTGGATCTTGTTGCTCCCTTCTGATGAATTTGTTCTTCAAAATTGAAACCCA AGGATGCTGGAGGGTGTTAAATTTTATTAAAAAAGCTGGCAAAATACTCGTGTATTTACTTTCCTGGAGTATAAAGATTGGATTCAGCAAAAAATAGGAT CAATTTTTGCGTTGGGTTGATATAGTATCCTAAAAGATTGTTTAAGAAATATAAAATGAGCAAGTTAATGTTGGGAAATTAAGCCTAACTTCTGTATGTC AAATTATCAGTTTTGTTTTCATAAACAATAATATTATGATATTTTGTCAACATTTTCTTTATAATTTTCAGGATTTAAATTTAGTAAATGTCATCGTTTT TTGTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48016; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_68856
| Blastp | Zinc finger CCCH domain-containing protein 38 from Arabidopsis with 30.68% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 38 from Arabidopsis with 70.79% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410ZKTI) |
| Kegg | Link to kegg annotations (AT3G18640) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464031.1) |
| Pfam | RNA-binding, Nab2-type zinc finger (PF14608.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |