| Id Trinity | FTRINITY_DN55040_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_68857 |
| Sequence | CACCATTTGACTTGTTACTCACACTTCACTTCTCTTGGAAAACCTCTGCTACTCACACCTTCCATGGTTGATTTCAAATGACAAATATGACGTGGCGTCT TTGTACTGAAATCTAGGGTTTCAATCTCTATGGCAGTCATATTCTATTACTATTACTCACTCAGCGCTCTGCATTAAGTGAAATAAAGCTTCAAGGCTTG AGAAGCAAGATGAGTGGAAGTGGCACAAAGCGCTATTCAAAGTGGGATTTGAGAGATGAACCTGAATATGCATGTGATAGTAAGCAATTGTGGTCTGGGC AGTCCTCTGCGGATATTGCTGGTAGTAATAGTCCAAAGTCATCCTATATGGAAAGAAATGATAGGTTAAAACCCACAATGGGATTTTCAAGTAAGGAACC TTTTTCTAGAGGCAGAGGTTCAAATAAGGATGATATTATGAATAATAAAGACTATAGAGATTGGGTTGAAACAATGGAATGGGATGCTGATGGAAGTTAC AACAATAAACTTTCTCCTGGGTTTGAGGAACGAAAATATAAGAGACGTAGTCAATCCCCGAAAAATGGTCGGAGCATGTCAGTCAGGAGTAGTCGGAGCA GGAGCCCTCCCCATGGTTTTAGGCGGGATTCAGGATTCAGTGACATAAATAGAACGAGGGCTGGAGGATCATTACAACCATGTAGAGAGTTTGCTGCTGG TAAATGCAGAAGAGGCAGCAATTGCCATTTTCTTCACCATGATAATCAAAATTATGAGGATAGTTTGGAAAGTAAACATAGGGAAGATGATGCTCCCAAA TATTATGGTCCCCATGACAGTAGAGACCATTCTCATAGGAGTGGTAGATCTAATGAAGCTTGCGTTAATTTTGCTAAAGGCAGATGTAGAATGGGATCAT CATGTAACTTTGTGCATAACAGTTCTGGTGGATACAGTAAAGGTTCTGTGGATGAATCAACTAGAGAAAGGGAAAATGATAGAAGACGCAGAGATAATTC TTTTGATCAGGTTGGTGGACTTGGGCCCAACCGTAGTGGTCCTACTCCTTGCAAATTTTTTGCTAACGGAAACTGCCGCAATGCTGGACATTGTAGGTTT TCTCATGATAGGCAAGCATATGGTAGCTCTCCTAATAGAAGATCAAGGGATGATAAGTGGGGGAGCAATCTGGGTGGAGATCATCAGACATTGGATAGAC GAGAATTGATTGATTCAGTTAGTCCTACTGGAAGACTAAGAGATAATAGATGGGGTTCAGATGGCAATATGGTAGACAAGGACAATCCAAAACCGAATGA TACAGTTGCTGTGTCTGATACATCAAAGCTGGTTGAGGACAAATGTGGAAATATAGGTGCCTCAGATCCTGGATTTACTCCTTGGCCTAGAAAGGAGGGA TGGGGTCATGCTTTATATAAGAACAGAGAGCATAGTGAACTAACATTTTCGAGTGATAAGGAAACTGGCTATTGGATGGCAGAAAATGCTGGTGCCAACA GGCACGTTCCCCAGCCAGCAGGTACAGGCAATTGGTCTGGTGATGAAATGTCTCCTGATTGGAATTACAGGGTGGGATCTTCTAGTCATATTGAAGAAGA GCATGGACAGAATAAGCATGGGATAACCCAGGGTGGTACATATTTAGCCACTGAACGTGAAAGAACACAATTTATTCCAGGGCAAGCCTTGAATCAGAAC GCACAGAATATAAATCCTTCACATTCTTCAAGCGGTCATGGAGTTGGACAAAGTCAAGTGGATGTTCCCAATCTCCCTTCAAGAGGAGTTGTTGAAAGTA TGCATAACCAACAAGTTTCTGCTGATCTTCAGGAGCAGGGCTTTAATAAGAATTCACAGAATCCAAATCTAAATCCAAGCAGCCATGCAGTTGGACAAAG TCAAGTGGCTGTTCCCGGTCTTCCTTCAAGAGGAGTAGATGAAAGTATGGGTAACCAACAAGTTTCTTATGATGTTCCCTCAGGGAAAGGGTTTAACTAC AATCCACAGAATATAAATCCTTTTTATTCTTCAGGTGGCCATGCAGTTGGACAAAGTCAAGTTGCTGCTCCCATTCTTCATTCAATTGAAAGTATGCATA AGCAAGTTTTGAATGATGTTCTTCCAGGGAAAGTCTTTAATTACAATGCACAAAATATAAATCCTTTGCATTCTTCAAGTGGGCATTCAGTTGGGCAAAG TCAAGTTGCTATTCCAATTCTTCCTTCAAGAGGAATTACTGAAAGTATGCATAACCAAGAAGTCTCTGCTGAGAAAAAGTACACTGTTGAACCAAATGTC ACGGTTGAAGGCTTATCACAAGTTAGTTCAAGAAATCCTCCTACTAAAAATATGGTAAGCAATGAACAGCTTACTCAGTTTAGCAGTCTCTCAGCCTCTC TGGCTCATATCCTTGGAACAGGTCAGCAACTGCCACAACTTTATGCTGCTTTAAATTCTAATGATGCAAAGGATACTTCCTCATTAGCCAAAACTGAAGT GCCAGCTATTCCTGTTTCCAATACATCCATCAAGCCAGATCCTGTGCTTGGATACAGGAAGCAGTATGATCCAATGTGTGATAGCATTGAAACAAAGAAA GTTGTTGCAAGTGGGGCTACCCCTGCCTTTTCTCCAAGTAAAAAGAAGGCAGAAGATAAAGTAGAATTTCAATCACAAGCGTCTAACTCAAGGAGACTAA ATTGTGGCAACTCTTTTAAGGCTGCCTGCTCAGAAGAGCATTTAATCCAGCTGCAGTCAGGTCGAAACCTTGAGTTTAATAAGGAGAAGAATGACGTGAT AGTTGAGGAAAGGCAAAATTCGCCTGGTGATCATAAAAATACAAAAGAGAATGGTCCTTTGGAAAACATGGACCAAAAAGGTGGACCTGATGATGATAAG ACATCAAAGGATGCAAAAGGGATTCGTACATTTAAATTTGCATTGGTTGACTTTGTTAAGGAGCTTCTGAAACCAGCATGGAAAGAAGGTCAAATTAACA AAGAAGATTATAAAGCAATTGTGAAGAAAGTTGTTGATAAAGTAACTGGCACCATGCAGGGCACCAATGTTCCTCAGACGCAAGAGAAAATTGACCACTA TTTGTCATTCTCTAAACCAAAACTTAGCAAACTCGTACAGGTCAGTGGTGGTTAAGTTACATATTGCCTACATGTTTGAAGGATTTCAACTAGTTCCCCC ATCTTACTTTTAGTTTGATAGGTAAATGTAAACATTAGATGAAGCTCCAGAAACTCTTTAGTTTCCAAACTGCTTAATTTTGATGTTGCAAGAGTTGATG GAAAATTGCCCAAATTTAATTTTAGGTGAGAAAATATGTACTTATCCAAGACCTTACATAAAGGGCGGCCAGATGCACGAAACTCTCACCTATTGGGGTC TGGTGATGGTAGATGTACTAAGTTTTACCCTCACATGCAAATATGCTGTTTCCGGGAACCTTTTTGAAAATTGAACTATTTTCTTCTTTTTTTTGAAAAT TTACTCAGTTTCTTTTTTATTTATTTCATATTTTACTTATTTTTCAGTTTAACAAGATCTCATGTGGAATTGAAGAAGTGACATCTATCTGTTGTACTTT TTTCATTACAGCTTTTGAATCCATTAAAATATTTTGACCTGATTGACCTCTACAAGATTTCTCACCATAGTTGCTGAAGTTTTACCCTAATATTTCTTAT GTAGAAGTTGTGCTAGTTTGCTACTAGACATATGTTAGCTTCTGAATCTAGATTGCATTGGAGACATTTGATGATAATTGATTACTTGTGGCCTTTATGA GTTTTCTGGCGTGTTTTACAGTTCTTATCATTTTGGTTGCAGGCTTATGTGGAAAGGGTTCCGAAGGCTTAGCGCAAGTATAGAAATTTGTCTATCAAAT CATTCTTGGTGTTATTGTCTTTATCTTGTACTATGTTTCATTTTCTCCAGAATCTTCTTTTTTGTGTGTCCTCTTATTCCTGTACTCCATTTTCTAGTAG AATCTAGTAGGCATTCCAGAATCCAGAGCTCGTGTACATACAATCTGCGGGCATTTCTTTCTTTTTCGACCTTTAGTTGTTTCTTCTGAGAAGAACTATT GGCTGTTTTGTGCCATTGGATATTAATCTTCAATTGGGATGCTAGGCAGTTGTTATGTGAGAGTCATTTTATTTTGTTAGTTTGTTGTGTAATTACCTGA GGAGTCATCTCTTTCCTTTTTGTAAAACAGAGTTCAGGACTTGTTAAAGAAGGTTGTGAGACTTATGTGCAGACTTTTAAACCTGTTTGTTCAGTTTTCT GACTCTGCAAAAAGTTCCAATGGTGATATTTGCAATTTACCTCCTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48016; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_68857
| Blastp | Zinc finger CCCH domain-containing protein 55 from Oryza sativa with 59.77% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 55 from Oryza sativa with 60.71% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410ZKTI) |
| Kegg | Link to kegg annotations (4344611) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434518.1) |
| Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |