Id Trinity | FTRINITY_DN55053_c2_g1_i6 |
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Name Transcript | Ll_transcript_66898 |
Sequence | TTGGCGCAGGTCTTGTAATTCTGAGAGTTCTATACATGAGGCAGTTCTCCATTGCAAAAGATCCATTGGCCCAATACAATTGCTAGATGATTGGACTCCT TAAGCATGGTGATGGTGTCAAGGATTTGATTCAAGTCATGCATATGAAAAAGGCTTTGTTGGTAGAAATTTTCCAAAAGGGGTCAGTATTAATAACTTGA TATAGACGCATAGTCACTGGAAAAGCTAGAACTCCTTCCTCACTTGTCCAACTAATGAAGGTTACTTCTGCTCATAATTTTCTCACTCATTTGAAGGAGG GTGTAATAGTTACAATAGCTTCTAAATTATGTTTATCGGAGTTAGCAAACTTCAAGTAATTTTTGATCTCTTTGGCATGTCCATGTCTTAGATGAAACCA CTTCTTATTTGGTTTTTGCTTTCTATTACTTATGGCAATGGCGAGGTCATTGGGGAAGAGGTCTTGGAGGACAAAGGCATGCATTATAGTTGAGAAAAGG AGTGCTGTCACTATGAGTGAGGAAATGAGGCTTAACATTGTAGACAAAGCCTTTGTCATAACATTTGTGACTTGATTTGAGTAGTTTATGGTTGCAATTG CTGCACCAGTCATTGGAAAAGTGTAGGCCCACCATGAAAGTGAGAATCTGCATAATCACATTCACATCATATATGTGTCAGAAAAATCAAAGTAACCAAA CTAATAGATATGTGGGTGAGGAAGTAACATACTTGAATCCTCTGAAAAAATTGACCCGGACAGCCTGCAAAAGCATATATGAAACTAATAAATAACTTGC ATAATAAAGATAAATTACTGATATATGCATTTGAGATATAGTTAGTTACAAGTTGTTTATTTCTCAATGTACACAAGCAACATAAATGGCTTGATGTAAT ACTTTCTCATTGAACTGATTTCAGATTTAAGTTTTCTTCTTCTCAATTGCTATACCATGTTTGAGAAAATTGTGGAAAATGAAAGGTTTGGAACCACAGT GGTTATGCATATTTGTAGTACTAGTGTGACAGTTTAACATACCAGTGAGAAATAAAGGAACATGGCAATAAAATAGGCAATCCGTGATCTATAATCAAAA GAACCCTGAATTCTAGCCCATGCCACAGAAGCAACACTAGGTGCTGCCACAAACAGAAAGAATACTGGATGGAGATCTTTTGGTAGGGTCTCATTTGTTG GAAGTCTCTGATAGAGAGTTACAAACAAGACTATGTAGTGAGCCAAACCAACAGCAAAGAAGAACATAGGCCCTTCTTTAAGACCCATAGATGCACCTAG TAATGCTCCTACAAAGTTTCCAACAATTGAAAGATGATTTGATGGATTTGCCACCTTTGAAAGCCTCCTTTCTCCCCCAGACATCCACTGTCCGTAAATT TTGAGCTCAAGACAGACTAGTGGAGCCATTAGAATGTACCAAAGTGCAGGAGGCAAGTTTTTGGCAATTGATGGGGGAACACCAAGAGCTAAGAACAAGA GTGCTATCCAAGGGGAAAAGAAGAAGTTAACACGGATTGGATGATAGTACTCGCGACGAACAGCTTCGAAGTAGAGAATGATTTTGAGAAGATATATGGT GAAAATAGTAGCGGTAAGAGCGATGGAGATGAACCATAAGATGAAATTTATTTTCAAGCTTATGTGAAGAAATGCAGTGGAAGGAGACATGGCCAGTGCT TTCCAAAGAATTGCTTGACTGCTAACTCCAAGACAAATACCAAAAGTTGATACTGGAAACCGAAGAGGAAAGGGCCACTGGTTGTCCGAAGGAAGCACTA TCTCTTCTGAAGCCTGTTGATGGAGGAAATCAAAATAAAATGTGTTACAATCTTCAATAAGAGTTTTTAATAAAATGTGTTGTATTGTTTATAATCTAGG ATGTTGATTCTTTTTAATATAAAATTAGTATAACTGTACTTAAATTGGTAGAAGGTAATTACATACCCTAAGAGTTTCTAACTCAGGACCTTCCAATGCA TCGAAGTAGCGACTAACAGGTAAAGGCCTATCGGTGTTCCTTATGCCGCTGTCCTCTTCTACAGTTAGTGCAGGTGACCTTCCACTTAGAATTGAAAACT GTTTCTCAAGTTTGCCTGACCATGTTTTGAAATAGTCAAATCTGCTATCCTTCAAGCTTTTGATGCTTTGATGATTGGCAAAGTTAACACCACTAATTGC CTCTAGTTGCTCACTGCTTTTTGATGGCAATGGATGCTTGGAGTCTTCAGTATTTATTTGAGAAGAGGATATGGGAATACCATCTCTCAAATCAGTTTCA CCACTACAGAGAACTTTAATGCTGTTCTGTGGCTGAACCTCTTCACAACAGAGTGGCATGTTGATAGATACCAAATGCTTCTTTTGATGATTGATGGTCA CAGGTTCATCCACTTGTCCTTCTGCTGAGACTGTTTCACTTTTCTGTTACAAGCATTAAAAGAGTTTGATTTTACATATCTCCTAAATTATAATCATCAA AATGGATGATCAATGGCATGTTATTGAAATTTAAAAAGAGACTTACTATTGAAGATAGGCTGGGATATTGAAGGTCACTAGCATAAAAGGCAGCTACTTC ATTTGATGATATATACTCAATTAGTGATGGAACTTCAGACAAGCCATATTCTTCTACTTGACAGTTTTCCATTATTGACCTGAAAGGATATGGTACACGT TGCAATCCAATATATATTATGCCCTAAAGATGGAGGGAGAGTGAAAAACCTAAAACCCACTTGTTGAAGTTGAAAAGATGTCATCAAAAATAGGTTTTTG TCTCCTAAGGTAAATAAATATATGTGCTCAAGTAGAATATTCAAAATGGGTTGGAGAAGATGAAAAGAATATTCAAGCTTTGTTCACATTAGCAGCAAAG CAAGGAGCTTGCAACCATGACTAAAGGATTTACTGGAAGTGATCTTAAGGTTGGTGCAAGTTTCACAGCAGTGGAATGATTTGTATGGAGAAGGAGGTTC AAGGAAGAAACAACAACTCACTTATTTCCTTTAGATAGTGAGGA BLAST |
Tissue | flowers |
Gene name | LI_gene_48114; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_66898
Blastp | S-type anion channel SLAH3 from Arabidopsis with 50.62% of identity |
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Blastx | S-type anion channel SLAH3 from Arabidopsis with 61.79% of identity |
Eggnog | C4-dicarboxylate transporter malic acid transport protein(ENOG4111I0D) |
Kegg | Link to kegg annotations (AT5G24030) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427718.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |