| Id Trinity | FTRINITY_DN55061_c1_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_68042 |
| Sequence | TAAAATTACAGAATGGTTACGCCATAAATGATCCATTGAAAAAAAGTGACGTTGCTTCTTTAAGTTGGTTGACGTCACCGAAACGACGACTCTCGTCTTC TTTATTTATTGTTTTCCATTGTCGTTTCTTAAAAACACCGTAAAACCCCTCAACCACCCTTTATTCCTCAGATCTACACTTTTTATGGCTTCTACGGCTG TTGCCACCGCCACCGCCACCGCCACTGGCATCGTTGAACCACCGCACCAGCAGACGGTGGATCCTTCTTCTTCCTCGAGACCGTCATCTGCCTCTGCCGA AGACGCCGTTGATCGCTATGATTCTTGCAATTCCTCGCCGAATCTTTCGCGAGAATTTGAAATTCAGTTACAGTCTATGGACGTATTGAAGAGTGAAGAG TATCGGCAGTTGTTTCGTCTTCCACTAGAGGAAGTTCTTATTGAAGATTTTAATTGTGCCCTTCAGGAAAACATACTTTTTCAGGGTCATATGTACCTCT TTGTCAACTTTATTTGTTTCTACTCAAACATATTTGGGTTTGAGACAAAGAGAATAATTCCATTAGCTGAAGTCACAGGCGTACGGAGGGCAAAAACAGC TGGACTCTTTCCCAATGCCATTGAGATTATTGCTGGAAGCAGAAAGCATTTCTTTGCATCCTTCCTTTCCCGTGACGATGCTTTCAAGATCATTAATGAT GGATGGTTGCGACAATGTAATGGTGCCACAGCGATTACTGAACAGCAGGAATCAATATCTGAGTTAATCAGCCAGGACAATGGATTTATAGCTATTGAAA ATGTCAAAAGTGCCGGAATACTAGACAAAGAATCGCTTTTTTCCGAACTGAATAAAGATGTGGGGCTTCCATCCCATGTTGGAGATGACCCTGAATTGAT GACTGCTCCAGAGAAGCAATCAAGTATTGTACAGGTTGCTGAACCCATATTGAATAATGATGCCCCAAGTGTGAGTTGGAACTGGAAGGAGGAGGATATT GACGCCCCAAGAAGTGAGTTTTGGAACATACATATTACCTACATACATTATATAGGTTGTGGATTCAAATTCATAGAAGAATGTTTGTATTCCTTTAGAA ATTGTTCTGAGGAAAAAGATCTTGAGTTTTTTGTTTTGAATTGTTCAATGGATGTCTCTTAGTGTGGATCTGGAAAACTTGTGATTCTTTTGACATATAA ATAGAAAAGAAACTTTTATTTAGCTGTTGCTTCCAGATTTTGTTATGAAATATTGTCACAAAACTGCCCCTACTGAAATTTAGAGTGATTAGATGGTCTT GATGTATAGGGTGGAAAGGGAAATCAGCCTGCTATTATCTTACAGACATATTGTTCTGTTGTAAATGCGATTTTTCATCCCCTTGTTATATGACACAATA TCTTTGCTTCTAAATGTTTCTTTTTCTTTCCTGTGGAGGTTATTGATAGAGTTTGAGCTCCATTGTGCTTTGGTTTCAGTAGCTTGTTGGCTGTTTTTGT ATTTATGTTTCTGTGTAGTTTTTTGGTGCAGCATCCTCTGGTCCTCACATTCTCAATGAACTTCTTTTTCTATCGACAAAAATATGGATATGTATATGCA AGTTCTTCATTGAGTTTGAGCTATGGCAGTGCTTCCTTGTGTATATCACATTTAGTTCCAGAAGGTTATACATGTGTTGCAGAGTCAGTGTTTCCGATAA TGGTTGAAGACTTCTTTAGGTTCTTTTTCTCAGATGACGGTGTAAAGTTTCTCGAGTCATTTCATAAAAGATGTGGTGATAAAGACTTTGTGTGTTCTTC GTGGCATCCTCAAGAGAAATTTGGGTATGCTCGTGAACTGTCATTTCAACACCCAATCAAACTTTATCTTGGAGCAAAATTCGGTGGCTGCCGTGCGGTC CAGAAATATCGAGTTTATAGGACCAGTCATTTGGTTATTGAGACCGTGCAAGATGTCACTGATGTACTTTACTCAGATTATTTTCGCGTTGAGGGACTGT GGGATATAGAAAGAGACAAGGATGAATCAAAAGAATGCTGCATTTTGCGGGTATATGTGAATGTCACATTTTTAAAGAGAACTATGTGGAAAGGTAAAAT AGTACAGTCAACAATTGAAGAATGTCGAGAAGCTTATGCCACATGGGTGAATATGGCACATGAGTTGTTAAAGCAGAAAAAAATTGAAGATCAACAAGGT TTGACATTTGAATTTTCTGTATGCTTTTCTGAAATTTTGAAGCTAAAGGCCTTCCACATACTATTACATGAGTGTCTAGTGAAACCTCTTATTTTGAAGA TTATGATTTACTTTTCACGTGGCAGAAAGTGTTGCTCGTGTAAATCAAAATGGCAGAATGAATTTAGATAGAGAGGAGACTGTAGAATCTTTAGAAGGGT CAATGGAGCCGAATAACCCTACAACTAAAATGATACAACCTACATCCAAAGTCGTTGATGCTACCCACAATGTTGACAATCACTTGCAAGGGAATTTCAC TGGCACAATATCTGTTTCATCTTTGTTACAGGGGTTTATGATGAAGTTCAGGTTGTTTTTGAAAAATCAAAGCAATCTTTCAGTGATCCTTGTTACCGTT TTTGCTCTGATTTTCTTCATGCAGCAGTTCAGCATACTTGTGTTGTTGGCCAACAAACCTCAACACATAAATGTGAATAGTCCTTGTGTAGATTATAATA TGGAAAATGGAATGGCCAGAAACCCTTCAGACATAGCTTGGATGGAGCAAAGAATTCATCATCTCAAAGATGAGATGTATATGGTTGAGACTAGGCTTGA AAGGATGATGTATGAGCATGCACTCTTGAAAAAACAACTTCAAGATCTAGAGGGTAAGTAGTTTTTTTCTTTTACCAAATTTGGTTGTTGTATAGTATTT CTCTATGCATAGTTTCTGTACATATAATAATATGTGTAAATTCACTCCTCATCGTCGAAAATGACAATCGTATTTACTTCTACTTCTAGGATCTGTTTGC GAGTTGAAAAATGTTAACATCCTTGTTTTGATTACTTTTACACGTTGTTCTGAATTGTGTGGATTTCATGTGGACCAGCTAAATATGAGTTTTCTCTATT TAGTTAGTGGGTATGCCATGAAATGAAATTCATCTATAATTATTACTTAAAAGTGTTGTCCACATTTGATGTTGGTAAATCCTTATTTTGGTTGGTGCAA GATACTCTTCATTTTACTGTTTTGTGTAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48209; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_68042
| Blastp | Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic from Arabidopsis with 45.52% of identity |
|---|---|
| Blastx | Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic from Arabidopsis with 67.98% of identity |
| Eggnog | NA(ENOG41100KT) |
| Kegg | Link to kegg annotations (AT1G02120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450088.1) |
| Pfam | GRAM domain (PF02893.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |