| Id Trinity | FTRINITY_DN55071_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_67917 |
| Sequence | GGAAAAAGTTTTTCTATTTATTGAATAAGATTACATACCTCTATTTCTAGTTTCCCTGTGAAGTTGGCTTGTCTCATTCAAACGCAGCATCATAACACTC AACCCTCCTCATTTTCCCTCACACACTCAACCCTCCTCCTCTTATTTGAAATCGACCCTCTTCTTCACATATAATGCAACATAACACCATTCAAAAAATG CAACTTTAGTTTGCCACCTCTGTAGATCTGAAACACCTGGGATCTCAAAAAGAACAAATTTTGAGTTCTGGGTTTCATTCTTTGGTGCATTGGGTATTCG AAAAATCATTTTTTTCTTCTGGAAATTTGTGGAGACATTGTCCGGCTCAAAAATGGGGTCCAGTGGCAGCAAAGGCACTTCATCTCGTAGTTCATCGTCG TGTTCTAGTAGTTTCCGAAAGGGTCGATCTAAAAGCCACAGAGGCTTTCAATCTCATTGTTTAGGAACAGCATCTGGATCTCATGATTGTGATAATGACG AGGTTTTGGAGCAGAATAAAGTAAATAGAAGTGATGTTACATACACCAGTGACAACGAAATAGGCTCGGATGAAGTGAAGATAGATTCTTTTAGAAAAGT TAAATCTGATGAAATGCCTTGCATGCCCTTGAACCTCAACCTTGATGAGTGGGATCACATTGCATCCAGAACCGGCAGCGGCTCTGCCCATGCTTCTTCA TCTCACTCCTTGAACCCTTCAAGTCGATTCTTTTCTCGCTTAAGTCTTATTCCTGGTAATATAAGCTTCAGACTTAGCAGAACTACCAGTTTGAGGTCAT CGAGGCCTTGTCCTGTTTCTTCTGCAAGCCCCTCAATATTTGATAATGAAAATGAGCTTAATCTGCGCCCATGGTGTCCTGCCAACTTGGTTAATGGAAA TGAACCTCAACAGGGTAGTGACTCGCTTAATGCATCTTTTGTTAATCGAGTTCCTGTACAATATCACGAAGATGCTTCTAATAATTTAAGATCTATCACC CCAGCACTGGGTTCGCCTCAAAACTTGCAGAGAAGTCCCGCAATTTATCCTGTCCAGGATGTGGTGATAGATGGAGATGGTACAAGAGAAGTGCTGGATT TAAACTTGTTTACTCCACAAATTCATACTGAGTCTGAAAATATTGAGACTAGACATACTGATAGACGAAATGGAGTTCGAGAACATGTTGAACGTAATGT TCATTTTACAAGGACTTTAAGTGTTGGAAGGCTTCGTCATAGAGTTCTCCGTCGATCAACATTATCTGATTTCACCTTTTGCCCTCTGCAACAAGAAGGA GAATTAAGTGATGCCCGTCATAATAATGGAAGACAAGTAGGGGAGAGAGATACAATAGTGTCACCATCTGATCCTAATGCTGTACGTTCTCCTTCCACAT CTGGATATCCTCCATCTACTACATCTAGCTCCTCGTTTACCTTTCAAGAGTATGAGGTCGAGACTTCACGATCAAGAGAAACTAGGTATCAGGATATACT GGAACATCGATCCAATTTCCTTGAACGGAGAAGAAGAATGCGGTCACGGGTTCGTGCTCTTCAGAGGTTGGGTGGCCGGTTTGAAAATCTTTCTGGACAT GAAAGATCATGCATCTTGTCTGGTCAACTTAGAAATGGTCGTTGTACATGCCGAATCAACAGTCATGAACATAGTACCAATTCAAATGATGATACCAATG CTACAGCTAGTATATCAAGAATTGTTATGTTAGCTGAAGCTTTGTTTGAGGTTGTGGATGAAATTCACCAGCAACCTGTGGTTTTATCTTCCCGCCCATC TGTGTCTTCTATTGGATCTGTTCCGGCGCCTAATGAAGTTGTGGAATCCTTGCCTGTTAAATTATACACAAAGTTGAACAAATATCAAGAAGATGCTGTA CAATGTTATATATGCCTTGCCGAGTATGAGGATGGAGACAGCATGCGAGTACTGCCTTGCCGTCACGAATTTCATAGAACATGTATAGACAAGTGGCTGA AGGAGATTCACAGGGTATGCCCACTATGTCGCGGTGACATCTGTGTATCTGATTCATTGTTGAGGGAGAACTGAAGTGAGAATTTGTTGATCAGAGTTCT TGGGAGGAGTAGTAAAGTATCTCCACATACACTGGCCAGTGAAGCAAGTGTAACATTTGTGCACGCATGTGAATGTGTCATATCCTTTTCACTTTTCAAA GGGAAAAGGGGAGAAAAGAAACATATTAACAGTGTAGGAATAGATGAAAAGTTGACAAGTTTATTGATTAGAAAAAAGTAGTAATAGTAGTAATTTCTGA GTGACTCCTATCCCACCTGAAAGAACAACTAGACTACAATGATTTATGCAACTAGGTTTGTTTTCTTTAAATTTGGAGCAAAAGAGTGGCACTGGATCCC CAAAATTTGTTTTCTTTAAATTCTTCGGCGGACTTCTATTCCATATGTTCCTATCCTGAAATTCAATGCTTCTTATTAAAGTTCAGTATTATCTTTTTTT GGGAGGGGTTAAATTTAAAAAACTTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48302; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_67917
| Blastp | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 40.58% of identity |
|---|---|
| Blastx | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 40.58% of identity |
| Eggnog | Ring finger protein(ENOG410Z5DF) |
| Kegg | Link to kegg annotations (4344437) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422012.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |