| Id Trinity | FTRINITY_DN55071_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_67918 |
| Sequence | GGAAAAAGTTTTTCTATTTATTGAATAAGATTACATACCTCTATTTCTAGTTTCCCTGTGAAGTTGGCTTGTCTCATTCAAACGCAGCATCATAACACTC AACCCTCCTCATTTTCCCTCACACACTCAACCCTCCTCCTCTTATTTGAAATCGACCCTCTTCTTCACATATAATGCAACATAACACCATTCAAAAAATG CAACTTTAGTTTGCCACCTCTGTAGATCTGAAACACCTGGGATCTCAAAAAGAACAAATTTTGAGTTCTGGGTTTCATTCTTTGGTGCATTGGGTATTCG AAAAATCATTTTTTTCTTCTGGAAATTTGTGGAGACATTGTCCGGCTCAAAAATGGGGTCCAGTGGCAGCAAAGGCACTTCATCTCGTAGTTCATCGTCG TGTTCTAGTAGTTTCCGAAAGGGTCGATCTAAAAGCCACAGAGGCTTTCAATCTCATTGTTTAGGAACAGCATCTGGATCTCATGATTGTGATAATGACG AGGTTTTGGAGCAGAATAAAGTAAATAGAAGTGATGTTACATACACCAGTGACAACGAAATAGGCTCGGATGAAGTGAAGATAGATTCTTTTAGAAAAGT TAAATCTGATGAAATGCCTTGCATGCCCTTGAACCTCAACCTTGATGAGTGGGATCACATTGCATCCAGAACCGGCAGCGGCTCTGCCCATGCTTCTTCA TCTCACTCCTTGAACCCTTCAAGTCGATTCTTTTCTCGCTTAAGTCTTATTCCTGGTAATATAAGCTTCAGACTTAGCAGAACTACCAGTTTGAGGTCAT CGAGGCCTTGTCCTGTTTCTTCTGCAAGCCCCTCAATATTTGATAATGAAAATGAGCTTAATCTGCGCCCATGGTGTCCTGCCAACTTGGTTAATGGAAA TGAACCTCAACAGGGTAGTGACTCGCTTAATGCATCTTTTGTTAATCGAGTTCCTGTACAATATCACGAAGATGCTTCTAATAATTTAAGATCTATCACC CCAGCACTGGGTTCGCCTCAAAACTTGCAGAGAAGTCCCGCAATTTATCCTGTCCAGGATGTGGTGATAGATGGAGATGGTACAAGAGAAGTGCTGGATT TAAACTTGTTTACTCCACAAATTCATACTGAGTCTGAAAATATTGAGACTAGACATACTGATAGACGAAATGGAGTTCGAGAACATGTTGAACGTAATGT TCATTTTACAAGGACTTTAAGTGTTGGAAGGCTTCGTCATAGAGTTCTCCGTCGATCAACATTATCTGATTTCACCTTTTGCCCTCTGCAACAAGAAGGA GAATTAAGTGATGCCCGTCATAATAATGGAAGACAAGTAGGGGAGAGAGATACAATAGTGTCACCATCTGATCCTAATGCTGTACGTTCTCCTTCCACAT CTGGATATCCTCCATCTACTACATCTAGCTCCTCGTTTACCTTTCAAGAGTATGAGGTCGAGACTTCACGATCAAGAGAAACTAGGTATCAGGATATACT GGAACATCGATCCAATTTCCTTGAACGGAGAAGAAGAATGCGGTCACGGGTTCGTGCTCTTCAGAGGTTGGGTGGCCGGTTTGAAAATCTTTCTGGACAT GAAAGATCATGCATCTTGTCTGGTCAACTTAGAAATGGTCGTTGTACATGCCGAATCAACAGTCATGAACATAGTACCAATTCAAATGATGATACCAATG CTACAGCTAGTATATCAAGAATTGTTATGTTAGCTGAAGCTTTGTTTGAGGTTGTGGATGAAATTCACCAGCAACCTGTGGTTTTATCTTCCCGCCCATC TGTGTCTTCTATTGGATCTGTTCCGGCGCCTAATGAAGTTGTGGAATCCTTGCCTGTTAAATTATACACAAAGTTGAACAAATATCAAGAAGATGCTGTA CAATGTTATATATGCCTTGCCGAGTATGAGGATGGAGACAGCATGCGAGTACTGCCTTGCCGTCACGAATTTCATAGAACATGTATAGACAAGTGGCTGA AGGAGATTCACAGGTAAACAGGAATACGGAATAGGGATTGACTATTTGAGTCTTCTTGTGGTTAACTATATGGTTAATAAAATTAGGTCTGCCATCTTAC TGCTATAAGTATTAATGCATATTGGGCTTTGGAACCTTTGTAGTAGGTGGCACAGAAGAATAAAGAACATAGATTAGTGAGTTTTGCATTTTATGTATTA ATATCATGATGCTCCATGTTGCTGTCCTCTTTTTATGCAATGATTATGTACTAACTTTATATGAAACTCCACTTGTGCTAATGATGTTTTGAAATATATA TATATATATATATATATGTATATGTATATATACATACATATATCTAACGTTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48302; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_67918
| Blastp | E3 ubiquitin-protein ligase ZSWIM2 from Homo with 46.77% of identity |
|---|---|
| Blastx | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 42.86% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (151112) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422012.1) |
| Pfam | RING-like zinc finger (PF17123.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |