| Id Trinity | FTRINITY_DN55073_c9_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_69009 |
| Sequence | ATTTATTCCTTCCTTTTGATACTTTCCTCTCGAGTGATAATCCCCACCCAAAGAAAACATGCATTATTGAAATAAACACACACCACACATTTTTCTTCAA GTAGTAACAAACAAGCAAACAAACACCCAAAACACCGCACATGATGATGTCGTCGCCGGCTGAAAGTGACGTCATGTCACCGACTCCAGGAGCATTCAGG CTCCGTTGGGACGTGTTCTTGAGCTTCAGAGGCACCGACACACGCGAGAGCTTAATCAAAAGCCTCTACGAGTCGCTCCACGCTCACGGTGTTCGTGCTT TCCGCGACGACGATGGTTTGGACCGTGGCGACGAGATAGCTCCGAGTCTTTTAGAGGCCATTGATGACTCTGCCGCCTCCATAATAATAATCTCACCCGA CTACGCTTCTTCACACTGGTGCCTTGAGGAGCTGGCCAAGATTTGCGAGTGCAAGAGGCTGGTCCTTCCTGTTTTCTATCGGGTAGATCCATCTGATGTT CGGAAACAACTGGGTCCCTTTGAAGCGGGATTTAGATCTCATGAGTTAAGGTTCAAGAATCAGATGGAGAAGGTTGAAAAGTGGAGGAAAGCTATGAAGA AAGTTGGCGGAGTTGCAGGTTTTGTATTCAACAACAACAGTGACAAAGACAATCTTATTCAGCGTTTGGTGCAAAGGGTTTTGAAGGAACTGAGTAACAC TCCAATGTGTGTAGGTGAATTCACAGTGGGGCTTGAAGATCGTGTTGAGAAGGCGTTAGAGTTGTTAAAGGTAGAATCCAATGGTGTGAAAGTTTTGGGA TTGTATGGGATGGGTGGGGTTGGTAAGACAACCATGGCCAAAGCTATTTTCAATACTATTGTTGATCGTTTTAAGCATCGCTGCTTCATTTCAAATGTTA GAGAATTTTCATCCAAAAGTGATGGTTTGGTTTCTCTTCAAAGTAAACTCATTAAAGATCTTTCCCTTGGAGCAGTGGCACCCATTTTCACTGATATCCA CCATGGTATTTCTGTTATCAAAGGACGTGTTCGCGAAAATCGAGTTCTTATAATCTTAGACGATGTTGATAATGCAAACCATCTTGACATTTTGATTGGT AAGAGCAAGAGCAATTGGTTTTATGAAGGGAGCCGTATAATAATTACGACAAGGGATAGGGAAGTTTTAACCAAGAGTAATGTGAATGAGTTGTATGAAG TTAAGGAATTGTATTCATCTGAAGCACTAGAGTTATTCAGTTACCATGCACTGAGAAGAAAGGAACCTACACAAAATTTTCTGCATCTGTCAAAGCAGAT TGTGTCTCTCACAGGAAAACTACCTCTGGCTCTGGAAGTTTTTGGTTCATTCTTGTTTAGCAAGAGGAGAGTGGAAGAATGGGAAGATGCTTTAGAAAAG CTGAAACTAATTCGGCCTAAGCATCTTCAAGATGTGTTGAAGATAAGTTATGATGGGTTAGATGAACAAGAGAAGTGTATATTTCTTGATATTGCTTGTT TATTTGTTCAGATGGGAATGAAGCGTGATGATTTGATTGATATATTTAGAGGTTGTGGTTTTAGAGGGGAAATAGCTATCTCAGTTCTTGTTGAAAAATG CTTAATCAAGATCACTGAAGACAATACATTGTGGATGCATGACCAGATTAGAGACATGGGAAGACAAATCGTTCTGGACGAAAATCTTGTGGATCCTGGT ATGCGTAGTAGACTGTGGAATCGTGCTGAGATCATGACTGTTATAATGGATGTGAAGGGAACAAGATGTATTCAAGGAATTGCCCTAGATTTCGAGGAAG AGAGATTTATTAACGTAAAGGATGAATCAATTTCTTATATGAGCATCCAATGGAGAACCAGTGTAGGAAATATACTATCTTACATCAACCCAAGCATTAA AAACTATCTTTTACCTGAAGCAGAGAAAAACAAGGAGGTTGTACTTCATACTAAAGCTTTTGAACCAATGGTTACCCTGAGACTGCTCCAGATCAATAAT CTGAGATTGAAAGGCAAGTTTCTTCCTTCTGAATTGAAGTGTCTACAATGGAGAGGATGTCCTTTACAATATATTTCTTTGGAAACCTGGCCTCGAGAGC TGGCTGTGCTTGATCTCTCAAACAGCAAAAAATTAGAAAACTTTTGGGGCTGGAAAGGTTTCAAGGTGCCAGAGAACTTGATGGTCCTGAACCTCTCCTA CTGCATTCAACTTGCTTCTATCCCTGATTTATCCGGGTGTGGACGTTTAGAGAAGATTGTTCTGGAAAACTGCATTAGTCTAACTAGGATCCATGAATCA TTTGGCAGTTTGATAACCTTGCGTAGTTTGAATTTGACGCGTTGTTCAAATCTTATTGAACTTCCCAGTGATGTCTCTGGACTGAAACATCTAGAGAGCC TCTATCTCTCTGGCTGCTTGAAGTTGAAAGCCTTACCAGAAAACATAGGCAGCTTGAAATCCTTGAAAACTCTTCTTGCTGATAAAACGGCTATAAAAGA GATCCCTGAGTCCATTTTTCGCTTGGCGAAACTTGAACAACTTATTTTAGATGGTTGCCAACATTTGACAAGGCTTCCCAACTGTATTGGACATCTAAGT TCTTTGCAAGAATTATCTCTTAATGACTCTGGATTAGAAGAATTACCCAACACAATTGGATCATTGAAAAACCTTGACAAACTTAGTTTGATGTGTAAGT CTCTCACTGTAATTCCGGATTCAATAGGCAATTTGATATCATTGACAGGACTTTGGGCTAACCGCAGTGCAATCAGAGAACTCCCTTCTAGCATTGGTTC TTTATCATATCTGAGGGAATTATCAGTGGGAAACTGCAAGTTTCTCAGCAAATTGCCTGATTCAATTAAAGCTTTGGCCTCAGTTGTGGAGCTTCAGTTA GACGGAACAGCCATCACGAATTTGCCAGATCAGATTGGAGAGATGAAACTACTAAGAAAACTTGAGATGATGAATTGTAGTAATCTTGAATCTTTACCAG AATCAATTGGCAACCTAGCATCTCTTGTTACTCTCAACATATTCAACGGAAAGATTAGGGAATTGCCCGAGTCCATTGGATCGCTGGAAAATCTAGTAAA CTTAAGATTGAACAAATGTAGAATGCTAAGGATGCTTCCAGCTTCTATAGGAAATTTGAAGTCTCTATATCACTTTTTCATGGAGGAAACGGCTATGTCG GACTTGCCTGAAAGCTTTGGGATGCTCTCAAGCTTGAGGACATTGAGAATGGCAAAGAGACCTGATTCAGTTACCTATAACAATAGCATACTTGCAGAAC CTGAAGTTCCTGTTTCAAATGACAACCTCAACTATTTTGTACTGCCATCTTCCTTCTGCAATCTGACCATGTTAATTGAGCTAGACGCTCGAGCCTGGAA TATATCTGGGAAAATTCCTGATGATTTTGAAAAGTTATCATCATTAGAGACTTTAAAGTTCGGGCAAAACAATTTTCACACCCTCCCATCTAGCTTGAAG GGCCTTTCTGTTCTCAAGATTCTTGAACTACCAAACTGCAATGAGCTGATATTTCTCCCACCACTTCCTTCAAGCTTGATTGAGCTTAATGTTGAGAACT GTTCTGCATTAGAGAGCATCCATGACATATCAAATTTAGAGAGTTTACAGGAATTGAAACTCACAAATTGTGTAAAAGTGATGGATATTCCAGGTCTTGA AAACTTGAAGTCCTTAAGAAGGTTGTACCTCAGTGGTTGCAGTGCATGCTCCTCCCATGTAACTAAAAGACTTTCTAAGGTTGCATTAAGGAATTTACAG AATTTAAGCATGCCAGGAACCAGATTACCAGAATGGTTTTCAGGACAAACTGTCAACTTTTCCAAGCCCAAAAATCTCGAGCTTAAAGCTGTAATTGTTG GTGTCATTATTTCAATCAACCATAATATCAATATACCAAATATAACGCGAGATCATATGCCTGGTGTGATTGATGTTGAAGCAAATGTTCTCAAACTGGG CAAACGCCTCTATACTACAACTTTAAACATCCGCGGAATTCCGAAAACAGATGAAGAACACATTCACTTGTGTAGGTACAAAGATAACCATCCATTGATA GCTTTTCTACGTGATAGTGATACATTCTGTGTGACTAAAAGAGACCCACCTCTTGATAAAGGGTTAGAGTTAAAGAAATGTGGTGTGCATTTTATTTTTG ATGGGGATGATGACTATGATGGAGAAGAAGAATCATTGGATATAGGATTACAATCTGTTTCAGAAAAATTGGCCGAGTTTTTTAGAATTTCAGAAGGTGG TAGTGCCATGTATACCACTGACATAGAAGATGAGTGCCAGAAGAGATTGGAGACGTTGGACCAAGAAGAGTTCAAATCATCATCACGTTTATATATTATT TTGAAAAAAAGTTCGGTTATTTTCTTCCTAGTTAGCCTAATTTTTATGTTGTTGAGTTGGTTTTGCCTGAGGTTTATATTGTGAAGGGTTACTTAGAAGT TAGAAGTTAGAACTTTCTTGAATTTTTTATAGCACTTGATCCAAATATTTAAAAATGTATAAATATTCAATGACGGTAAGTTATATTTATAATTTTCAAT ATTTATTATAAAATTAACAATGAAAACCATTAGAATTAATTTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48341; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_69009
| Blastp | TMV resistance protein N from Nicotiana with 32.85% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 33.06% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433797.1) |
| Pfam | TIR domain (PF01582.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |