Id Trinity | FTRINITY_DN55087_c0_g2_i2 |
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Name Transcript | Ll_transcript_68600 |
Sequence | GAATAATATAAACGTTGGTTCGTCTAGTTATCACAGCACCTTCTTTAATTCTCTAAACTAAACTTAACTGAGTTAGGGTTTCTCTTTCAAATTGTTTACG TAGCCACTTCGATTTCACTCATCATTTCAATTACTGATTTTTGCTATCAATGTCTAACACCAGCAACAATGTGGGTGGTGTTGATAACACATTCAGAAGA AAATTTGACAAAGAAGAGTATTTGGAACGTGCTCGTAAGCGTGAGAAAGAGGAGGAAGAGGGTTCTCGATCCAAATCTAAAGCTAAAGGTCCTCCCGTGC AAAGGAAACCCTTGAAACATAGAGATTATGAAGTGGACCTCGAATCCCGCTTGGGCAAGACTCAGGTTGTTACACCAGTTGCGCCACTAAGTCAGCAGGC AGGATACTATTGCTCAGTATGTGAATGTGTGGTAAAGGACTCTGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCTTTGGGCATGTCT ATGCGCGTAGAACGTGCCTCTCTTGACCAGGTTCGGGAACGATTTGAAGTTCTTAAGAAGCGTAAAGATCATGGAAGTTTCACAGAGCAAGATCTTGACG AACGAATATTAAAACAGCAACAAGAAGAGGAAGAAAGGAAGCGATTACGTCGTGAAAAGAAAAAAGAAAAGAAGGAGAAGGCTGTTGAAGAACCTGAAAT AGATCCTGATGTTGCAGCCATGATGGGGTTCGGTGGTTTCGGATCATCCAAGAAGTGATGACATTCTACATGTGAGATGAGCTTTATTGTTTGAAATGTT GAGCAATTGTTTTGCAATGTTAAAGCTGAGTCTTGTATGTATCAACTTCACTCTGGATAGCTTAAAGATGAATCTAAGTTGAAAAGTAAAATAGTATGCC TCAAAACATTTTTGTAGTTTTTGAGTTAGTCCTTAACATTATATTCAATCATGTGATTCCTTTATGTTAAATTACATATGTATAATATAACCTTGATACT TCTACTCTCCAAATGAGTTTTAAATTATATTTTCTTGACCAAAAAGATGAATAGTAACTCGGAAGTTACCCGTGCATTACCGGTTTTTGACGCATGTAGA TGTCAATTGCAGTTCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_48435; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_68600
Blastp | Zinc finger matrin-type protein 2 from Mus with 56.48% of identity |
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Blastx | Zinc finger matrin-type protein 2 from Mus with 71.11% of identity |
Eggnog | Zinc finger, matrin-type(ENOG4111GW4) |
Kegg | Link to kegg annotations (66492) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422663.1) |
Pfam | Zinc-finger double-stranded RNA-binding (PF12171.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |