Id Trinity | FTRINITY_DN55106_c9_g1_i5 |
---|---|
Name Transcript | Ll_transcript_22384 |
Sequence | AGGATGAGTAATGAATATTTAAATCTCAAGGATGAAAGAGAATGTTCTGGAAAAGGGAAAAGGCTTTGGAAGAAGGTGAAGTATCAGTTGGTTGAGTACC ATGCTTTGCCTGGTTACTTGAGAGACAATGAGTACATTTTAGGTCACTATCGATCTGAATGGCCAATCAAACAAGTTTTGCTCAGTATCTTCAAAATTCA TAATGAAACTCTCAATGTTTGGACCCATTTGATTGGGTTCTTCCTCTTTCTCGCTTTGACCATATACACTGCCATGCAAGTTCCAAAGGTTGTAGATCTT AACTCGCTACAACATTTATCAGGCATGCTCAAAAACGCAGACCTGCACAAACTACAATCAGAACTTTTAACGTGCCTCCCTTCATTGCCTGATTTTCACA GACTCAAGGAGGAATTAAGGACTACATTTCCATCAATCTCAAGTTGGCATGTAAAAGAGCTTCTGTATAATTGTTTGCCAGAAAGATTTATCAATTGCGA TCACACCGATGTCTGTGTTCTGCATACCGTAAAAGAGGACCTGGTGAACATAATAGCACCACTGATGATTAGACCAATTACAAGGTGGCCATTTTTTGTA TTTTTGGGGGGTGCGATGTTTTGCTTACTAGCTAGCAGTGCTTGCCATCTCCTTTATTGCCATTCTGAGCGCTTATCATACATTATGTTAAGGCTTGACT ATGCTGGAATTGCGGCCCTCATTTCTACCTCTTTCTATCCTCCAGTGTATTACTCTTTTATGTGTTATCCATTCTTCTGCAACCTTTACTTGGGATTCAT TACTGTATTGGGTATTGCCACCATCATTGTTTCTCTCCTTCCAGTCTTTCAGACTCCAGAATACCGCACCATCCGCGCATCCCTTTTCTTTGGGATGGGT TTTTCTGGATTAGCACCTATTCTGCACAAACTATTTTTATTCTGGGGCGAACCTGAGGTATTTCATACAACTGGGTATGAGATTCTGATGGGTGCTTTCT ATGGCATTGGAGCACTGGTTTATGCTACTAGGATTCCAGAAAGATGGATGCCTGGGAAATTTGACATTGCTGGACACAGTCACCAATTGTTTCATGTACT GGTTTTGGCTGGGGCTTACACTCATTACCAAGCGGGATTAGTTTATCTCAGGTGGCGTGACCTTCGAGGTTGTTGATTTAGTGCTATGGCAGATCCAATT GATTTGTTGTGTTGTATAAACGGTATGTATGTTTCAATTTGTATCTTTTATATTGATGTGAAATTGTGACTATAGTCCAGGATGTTTATGAACCTTAGGC ATTAATGTGTACACTTAGAATCCTCAAGCGCAAATAAGTAATAAAAACTTTATTTGGTCTATTGGGACTTGATAGAACCAATCTTCTCACTATTTTTGTG GGAGAAAGCATCCTTACATTCAAGTTGTTTGTGTAGTGCTCACTTGGGAAGTTGGAATAAATATTTCTCTGCATCAAAAGCATCATGGCTTGTCTTACAC AGGGAAAGATAATCCTACTTTGTACCTGCCAAAATAAGAATAACAAACATG BLAST |
Tissue | flowers |
Gene name | LI_gene_48620; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_22384
Blastp | Heptahelical transmembrane protein 4 from Arabidopsis with 76.9% of identity |
---|---|
Blastx | Heptahelical transmembrane protein 4 from Arabidopsis with 76.9% of identity |
Eggnog | Channel protein (Hemolysin III family(COG1272) |
Kegg | Link to kegg annotations (AT4G37680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444944.1) |
Pfam | Haemolysin-III related (PF03006.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |