| Id Trinity | FTRINITY_DN55106_c9_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_22385 |
| Sequence | TTTATTCTTGATTATTAATCAATTCATTGTTTCTTTTTTCTGATTGAGATAGGATGAGTAATGAATATTTAAATCTCAAGGATGAAAGAGAATGTTCTGG AAAAGGGAAAAGGCTTTGGAAGAAGGTGAAGTATCAACTAGTTGAATACCACGCTTTACCTGGTTATTTGAGAGACAATGAATACATTCTAGCTCATTAT CGATCTGAATGGCCAATGAAGCAAGTTTTGCTCAGCATCTTCACAATTCATAATGAAACTCTCAATGTTTGGACGCATTTGATTGGGTTCTTCCTCTTTC TCGCTTTGACCATATACACTGCCATGCAAGTTCCAAAGGTTGTAGATCTTAACTCGCTACAGCATTTACCTGACATGCTAAAAAACGTCGACCTGCACAA ATTACAATCAGAACTTTTACTGTGCCTCCCTTCATTGCCTGATTTTCACAGACTCAGGGAGGAATTAAGGACTACAATTCCATCAATCTCAAGTTGGCAC GTAAAAGAACTTCTATATAATTGTTTACCTGAAAGATTTTTCAGTGAGAATCACACTGATATTAGTGTTCTGGTAATTCCTGGGGGAAAGGCAGTAAATG TTAAACTAGCTTTCTCGTTTGATATGTGTTATTTCACTTTTTGCTATGTTGTGGATAAATTCTTCTTACATTGACCACCCCTGACTTATAACTTAGTTAC ATTTGGCACCCCTTTTGTTTCAAAAGTTGGAGGATAGTATAATTATTATCACCTCCCCTCTAGGTGGGGGTGGGAATGATAATTGAATCTCAGGAGTGGT GAATACTGGTGAGTGTAGTTTTTACAACAATAGAGGTGCCGAATATAATTAAGTCAAACCTGAAGGAGGTTAGTGTGATTTTCCTAATAAATTAATGAGT TCAAATTATGAGATTTAAGTCTCAACTGGAATACAGTTAATAGAATGGTTGAGCAATTTATTTTATTTTATAGAAAGTAAATCTTAGAATTAGAGTTGGT AGAGGAAAAATACTGAATGATAGATTGAAGATGGCAGTTTGTCAATAACTTCCTTCCTGGAGAGTGTAGCCTTCTTTCAGCTTTAAATATTTTATATATA TGTCAATACAAAAGTTTTACAGCTTGTTGTTTCATTGATTTTATGATCTGGTTATACTGATGACTGATTATGTTTTGGGAGTTCATGATTATTTCTTTGT TGATTATGTGCAGCATAATGTAAAAGAGGACCTGGCGAACTTAATAGCACCACTGATGATTAGGCCGATTACAAGGTGGCCCTTTTTCGTATTTTTGGGG GGTGCCATGTTTTGCTTGCTAGCTAGCAGTACTTGTCATCTCCTTTCTTGTCACTCTGAGCGCCTATCCTACATGATGCTGAGGCTTGACTATGCAGGAA TTGCAGCCCTGATATCTACCTCTTTCTATCCTCCAGTATATTACTCTTTTATGTGTTACCCATTCTTTTGCAACCTATACTTGGGATTCATTACTCTGCT GGGTATTGCCACCATGTTAGTTTCTCTCCTTCCTGTCTTTCAGACTCCAGAATACCGCACCATCCGTGCGTCCCTGTTCTTTGGGATGGGTTTTTCTGGT GCAGCACCTATTCTGCACAAGCTCTTTTTATTCTGGGGTGAACCTGAGGTGTTTTACACAACTGGATGTGAGATTCTGATGGGCGCTTTCTATGGCATTG GAGCACTGATTTATGCGACTAGAATTCCGGAGCGATGGATGCCTGGGAAATTTGACATTGCTGGACACAGTCACCAATTGTTTCATGTATTAGTCGTGGC TGGGGCATACACTCATTATCGTGCCGGATTAGTTTATCTCAGGTGGCGTGACCTTCGTGGTTGTTGATAATTGAAGTTATGAGCAGATCAGCTGTTGATT GCTCTACTGTATAAATGGTAAGTATGTTTCAATTCATATCTGATTGAGGTGATGGGAAGAATATAGTACCTGCCGAAAAAAGATTAGCTATAGTTATTAT TACCTAAGACAAAATAGATGGAAAACTAGTAGAAGCACATTATGGCATGGCACGTAATCAATCTTAAGAGTACTTGATTGCAGATGGACTAAAAAGTAGT TGCTCCCTATCAAGGAAACAATGGAACTTAATTTGCTTTCAATTATAATCAAATTATGTTGTTTTTGTACGTATAAGTTATGTCATTGTATTAGTAATTT CTATAAAATCTTCAGAGGGTCAAGTCATATTTGCTCTATATGACTGAAGTCTATGGCTTTGCTCAAAGCGTAGATGGGAAATGGGGTAGCGACGGTGATG TGAGTGTTACTTGTGGCCATGGCCATGGCCGTAGTTGAGTGACGGTGGCCTTCGATGCCAGCCAAACCATTGTGGAATTGTTGGGATGGTGAATTTTTGC AATGGGCTGTAGTAGTTTGTAAGCTTCTGGTCCAACTTTGTTGGTGATAAGCAAGTATCCCAAGCTTAGCTTCCGTTTTTTTCTTCTCAAACCAACCAAA CGCTGTCTATCAGGTTTTAACTTGTCCAATAGAAAGTCTCCTACTTTCAATTGTACATCTCTTATTTTACTTAACAGGCTCCAAAATTTATATGTTAAGC TTTTAGTAAATTAGTTTAGTGCTCCTTTGGTTGGGTTGAACCATACCTACCTAGCCCAAAATATCCAATCGAGTTAGCTTTTAATTTTAATTTTAATTAT TTTTTAAATATAGCAAGTTACACTTGAGGGCATGTTAAGGGAAAGACATCACGACCATGAAATGAACTTGTAAAATTATCTTTCATTACATTCTAAAAAC TAACTCACAAATAAGTGAATACTAGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48620; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_22385
| Blastp | Heptahelical transmembrane protein 5 from Arabidopsis with 70.89% of identity |
|---|---|
| Blastx | Heptahelical transmembrane protein 4 from Arabidopsis with 84.47% of identity |
| Eggnog | Channel protein (Hemolysin III family(COG1272) |
| Kegg | Link to kegg annotations (AT4G38320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423825.1) |
| Pfam | Haemolysin-III related (PF03006.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |