| Id Trinity | FTRINITY_DN55108_c4_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_21052 |
| Sequence | GTTGGATTTGTCCATATAGTGCGTGTCAGATATAAAAAAACGAGTCGTGCAATAAAAAAAGTTGGTTACTATAATCTGAAAATTTGGTGGTTGACATCAC ACGATTCACGATTCACACGATTCACGATTCACGATTCTCTTCTCTCCCACCATGGCCTCTCATCTCTTCAACCTTTCTCTATCTTCTCCACCCAAACTCT CCTTCAACTACTACACTCCTATTCCTCTCTCTCACTTCTTTTCCATTCCTTACTCCAAACGCTGTCGTTTCACTAACCGCAACTCTCTTCGCCGTCCACA TTTCGCTGTCTCCAACTCCTCTCTAACTCATACTTCCTCCCCGCTTCTACTTGACGTCACTGGAATGATGTGCGGCGCGTGCGTTTCACGCGTCAAGAAC ATCTTATCCGCCGACGACCGAGTCGACTCGGTCGTCGTCAACATGTTGACCGAGACCGCCGCCGTCAAGCTGAAGCGACACGAGGACGAGGTGGGAGGCG TTGCGGAGGGGCTTGCTCGGAGATTGAGCGAGTGCGGGTTTCCGACGAAGAGAAGGGCGTCGGGTTTGGGAGTGGCGGAGAATGTGAAGAAGTGGAAGGA GTTGGTGAAGAAGAAAGAGGAACTCGTTGTTAAGAGCCGTAACCGCGTTGCTTTTGCTTGGACTTTGGTTGCGTTGTGCTGTGGATCTCACGCTTCTCAT ATTTTTCATTCTTTAGGGATTCACATTGCTCATGGGCCGATTTTGGAAATTCTTCATAGTTCATATTTCAAAGGTGGTTTAGCTTTGGGGGCTTTATTGG GACCAGGACGAGATTTACTGTTGGATGGTCTAAATGCATTTAAGAAGGGATCGCCAAATATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCCTTTGT CATCAGTTTGATTTCACTACTTAACCCCGGTCTGGCTTGGGATGCATCATTTTTTGATGAACCGGTCATGCTTCTTGGTTTTGTGCTTCTAGGACGTTCT TTAGAGGAAAAAGCTAGGATTCAGGCATCAAGTGATATGAATGAACTTCTATCACTCATATCTACTCAGTCGAGACTTGTAATTACTTCATCAGAAGGTT CATCATCTAGTGACAATGTGCTTTCCTCTAACTCAATTTGCGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGACTCAGTTTTAGTGTTGCCTGGAGA AACTATTCCTATAGATGGAAGGATCGTATCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACAGGAGAGTCACTTCCTGTATTTAAGGAGGCAGGCCTC ACAGTTTCAGCTGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGCTCAAACACAATGATATCCAAGATAGTACGCATGGTTG AGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCGGATTCAATAGCAGGACCATTTGTATACAGTGTAATGACTCTATCAGCAGCAACATTTGC ATTTTGGTATTTTATTGGGTCGAACATATTTCCTGATGTTTTGCTCAATGATATTGCTGGCCCTGAAGGAAATCCTTTGCTTTTGAGTTTAAAACTCTCT GTAGATGTTTTGGTTGTTTCTTGTCCCTGTGCACTGGGTCTTGCCACACCCACAGCAATCCTAGTTGGCACCTCACTTGGGGCAAGAAAAGGACTTCTTA TTAGAGGAGGGGATGTGCTCGAACGCTTGGCCAACGTAAACTATATTGCTCTGGACAAGACAGGAACCCTCACCAAAGGAAAACCGGTTGTCTCTGCTAT AGGCTCTATTCATTATGAAGAGTCGGAAATTCTTCAGATTGCAGCTGCAGTGGAGAAAACAGCATCTCATCCAATAGCAAAGGCTATTGTTAATAAAGCT GAATCATTAGAGTTGATTCTTCCACTTACAAGAGGACAGTTGGTTGAACCAGGTTTTGGAACCATGGCAGAAGTAGATGGGCGTTTGGTTGCGGTTGGAT CTTTACAATGGGTCAATGAACGCTTCCAGACAAGAGTGGACCCATCTGGTTTGATGAATTTGGAACATAGTTTGATGAATCATTCTTCAAATATGACATC TTCAAACTATTCGAAAACTGTTGTTTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATATCTGACATTGTGCGCGAAGATGCGGAATCT ACTGTAACAAGGTATGTTTGTTTGCTGTACATGTATCCTAAGAATGTTATCCACACACTTTAGGGCAAACAATACTACTGCTTCTTCCAACCATATGTGA AGTTGGTTCACAACTTCCAGTAGAAATAGGGATAGTGCCCTTTTTCTTTTGGATTCCACTTCCACCTTAGCGTAGCTTGATTTGATTCTTGTTAAAAATT AGCACAGTGGGCATCCTTTTCTTAACCATTTGTTAGTTCCTCATAAAGTTGCAAGAAAAGACTTCTGATAAAAATATGTTCAAAATCTAGGAATCACTCA GCTGGTTGACAGTTTTTGTTGTGTGATAAATGAGTAACTAATCATTGAACTTAGTTAACTAGTTGAGCAATTAATTATTCCTTATGTAGAAATATTTTTC CAAGAGCTTACTTTTTTGTAATTATCCATTCTTTTTATATATGCAAGTGGTTTTGTTATGACTGCCTAGTCTGGTAGTAATTAGTTTAGACTCGAGAGTT TTATGGCATGATTCTGAGTTCACAATACAGACTATCACTCATTTGCAATAAGATTATACAGTTTTGAATTAAGTTACGCATTCTCTTAGCTTTGTTTCCA TTTATTTTAATGGGACGGGAGTTGTATTAACTGGTTGCTTCCATTATTTTCCATCTTAGTATTTGCTTAAGTTTAACCATTGAAATATATGGTACACATT CAATTAAAATATTTCCTGTATTTGTTGAAACTGTTTGCTGCATTGAAGTATTTTTCAATTGCTAATTTGTGCAATTTTTGGCTGACTTTGTTTCCTCTAT TGGAAGGCTTAAGCAGAAGGGGATTAAAATGATCCTCTTATCCGGAGACAGGGAAGAAGCAGTAGCAACTATAGCAGAGACGGTTGGAATTGAAAGTGAT TTTGTCAAAGCTTCACTGTCTCCACAGCAGAAATCTAAATTCATTTCATCTCTGAAAGCTGCTGGACATCGTGTTGCAATGGTAGGTGATGGGATAAATG ACGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCCATTATACTTCTTGGGAA CAAAGTTTCGCAAGTATGTCATTTCTGAATTCCTTAATTTATTAATTTGATTTTCTGCATGTCGAGATTTTACTTTTATGCTTTCACCCTGCATCATTTC ATGTATTATTCTTGAGTGATCCTTTTTCCTCCTGCATCTCGGTAAAACACTAGTTGTTTTTTTATTTTTTGACATTTTTTTCCAAGTGAGTAGAAGGACT TGTAGGATAGTTCATAGGAGAATAAACGGTATCTTGTTCTTTTTACAGTGAGCTTTGCTCTCTGCATACCCAATTCTCTTATGATGGAATTGACCCTCAA AAAATTGAAATTGCTGCTCAAGAGTATGGAAATGTGTTCTAATAAGTATATTCTGTTAGTACTAGCATATTTGGTACAAAATCCACTTTATTGTTCTCCG GTGTCTTCCTTTACTGACTTTTTATTTGACAGATTGTTGATGCACTAGACCTTGCACAGACAACTATGGCAAAAGTGTACCAAAATTTGTCTTGGGCAGT GGCCTACAATGTTATTGCCATTCCCATTGCTGCTGGTGTATTACTTCCTCATTATGATTTTGCTATGACACCTTCACTTTCAGGAGGAATGATGGCTCTG AGCTCCATCTTTGTGGTGAGCAACTCACTGCTTCTACAACTTCATGGGTCTAAGACTTCCACAAAGGGCTCACTCTAGTCACATGTAATAAACATATCTT CTATCCATTACAGCATGGTACAGTGTAAGTTTTGTTAATTAACGGGGGTGGTGATTCTTTCTAATCAAGACAATAAGAGTATGATTTAGGCATTCATCAA ATAAGCAGAATTAAGAATCACAAGCAGCAAGCTCCTATTTTGTTGTTATTGTAATTAAAATTTGTGTATAGTTGTGACCAATATCTTGAGTAAGTCTGGT TTTGATGCCATGTTAGAATAGCTCAAGTCAAACTTAATTCAACATTGTTTGTCATATTTTCAATTAGTGTGCAACTATCTTTGTACTATATGAATGCATC AATAAAAGAAAGTTCCAACCATAGGCAGAGGGGGAAGAAATTAGTGATTGATTCAATTCAATAGTAAAATGCTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48638; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21052
| Blastp | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 72.58% of identity |
|---|---|
| Blastx | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 75.08% of identity |
| Eggnog | p-type ATPase(COG2217) |
| Kegg | Link to kegg annotations (AT5G21930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437831.1) |
| Pfam | Heavy-metal-associated domain (PF00403.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |