Id Trinity | FTRINITY_DN55108_c4_g1_i16 |
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Name Transcript | Ll_transcript_21056 |
Sequence | GGAAGGATCGTATCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACAGGAGAGTCACTTCCTGTATTTAAGGAGGCAGGCCTCACAGTTTCAGCTGGAA CTATAAATTGGGTAAGGTTTTACAAAGGCTCGAAATAGATACTGGATTATATGGCATGCTGTCTCACTAATATTCACATGTGGAGCTACTGTGTGGCTTT TATTTTTCTACCTTTGATTGGGAGAGCAGTTGATAATCTATTGCATTGAGCAAACATATTTCTATTTCAGGATGGTCCTTTAAGGATTGAAGCTTCTTCA ACTGGCTCAAACACAATGATATCCAAGATAGTACGCATGGTTAGTATACCATTCTCTGATGGCTTAGTGGTGAGATGATATATAATGTTTAATGAGGTGA TCAAAATTTTCAGCTTTTCCCCCAGTTAAGAATGTAGTTTTCTGTAATCATAATTGTTATTCTTTGTAGGACAATCTAGTGCTGAGCAATTTTTGTAATT GCTTAGCTTCATTGTTCATATGGTATTTAGAATCATGCAGTCAGGGATGATGTATACATTTTTTATTGACATTTTTTGTTTGCATTACTGACATATCCAC TGACTTGGGATATATGCTAATTAAACATTGATACAGAAATTTTCTGCAATGTTGTTACAAACTAACTGCTTTATCTTGTAAAATTTAGGTTGAGGATGCT CAATCACGTGAAGCACCTGTACAAAGGCTTGCGGATTCAATAGCAGGACCATTTGTATACAGTGTAATGACTCTATCAGCAGCAACATTTGCATTTTGGT ACATACTTTTTTCCATTCATACTTTTTATTTGATGTGATTATGATTTGTGGCGCTGATCCTAGATGATGGGCTTTATTTGGCATAGTGATTATTATTATT ATTATATATGACATATGTACCATACACTTAAAAAAAGGGAGTTGTATCCTTTTGTGTTTCATGTCTATGCCAACAATTCATGCTTCGTACAATCTTGCAG TAAGATTTATAATTATCATGGACATTTAATTTTTCGAAGGAAAAGATTTTGTGTACAGTTCATCTTACCCATCTCCTTTGACAAGTTTGATGCATTTGTC TCCAGGTATTTTATTGGGTCGAACATATTTCCTGATGTTTTGCTCAATGATATTGCTGGCCCTGAAGGAAATCCTTTGCTTTTGAGTTTAAAACTCTCTG TAGATGTTTTGGTTGTTTCTTGTCCCTGTGCACTGGGTCTTGCCACACCCACAGCAATCCTAGTTGGCACCTCACTTGGGGCAAGAAAAGGACTTCTTAT TAGAGGAGGGGATGTGCTCGAACGCTTGGCCAACGTAAACTATATTGCTCTGGACAAGACAGGAACCCTCACCAAAGGAAAACCGGTTGTCTCTGCTATA GGCTCTATTCATTATGAAGAGTCGGAAATTCTTCAGATTGCAGCTGCAGTGGAGAAAACAGCATCTCATCCAATAGCAAAGGCTATTGTTAATAAAGCTG AATCATTAGAGTTGATTCTTCCACTTACAAGAGGACAGTTGGTTGAACCAGGTTTTGGAACCATGGCAGAAGTAGATGGGCGTTTGGTTGCGGTTGGATC TTTACAATGGGTCAATGAACGCTTCCAGACAAGAGTGGACCCATCTGGTTTGATGAATTTGGAACATAGTTTGATGAATCATTCTTCAAATATGACATCT TCAAACTATTCGAAAACTGTTGTTTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATATCTGACATTGTGCGCGAAGATGCGGAATCTA CTGTAACAAGGCTTAAGCAGAAGGGGATTAAAATGATCCTCTTATCCGGAGACAGGGAAGAAGCAGTAGCAACTATAGCAGAGACGGTTGGAATTGAAAG TGATTTTGTCAAAGCTTCACTGTCTCCACAGCAGAAATCTAAATTCATTTCATCTCTGAAAGCTGCTGGACATCGTGTTGCAATGGTAGGTGATGGGATA AATGACGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCCATTATACTTCTTG GGAACAAAGTTTCGCAAGTATGTCATTTCTGAATTCCTTAATTTATTAATTTGATTTTCTGCATGTCGAGATTTTACTTTTATGCTTTCACCCTGCATCA TTTCATGTATTATTCTTGAGTGATCCTTTTTCCTCCTGCATCTCGGTAAAACACTAGTTGTTTTTTTATTTTTTGACATTTTTTTCCAAGTGAGTAGAAG GACTTGTAGGATAGTTCATAGGAGAATAAACGGTATCTTGTTCTTTTTACAGTGAGCTTTGCTCTCTGCATACCCAATTCTCTTATGATGGAATTGACCC TCAAAAAATTGAAATTGCTGCTCAAGAGTATGGAAATGTGTTCTAATAAGTATATTCTGTTAGTACTAGCATATTTGGTACAAAATCCACTTTATTGTTC TCCGGTGTCTTCCTTTACTGACTTTTTATTTGACAGATTGTTGATGCACTAGACCTTGCACAGACAACTATGGCAAAAGTGTACCAAAATTTGTCTTGGG CAGTGGCCTACAATGTTATTGCCATTCCCATTGCTGCTGGTGTATTACTTCCTCATTATGATTTTGCTATGACACCTTCACTTTCAGGAGGAATGATGGC TCTGAGC BLAST |
Tissue | flowers |
Gene name | LI_gene_48638; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21056
Blastp | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 70.93% of identity |
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Blastx | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 70.93% of identity |
Eggnog | p-type ATPase(COG2217) |
Kegg | Link to kegg annotations (AT5G21930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437831.1) |
Pfam | E1-E2 ATPase (PF00122.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |