| Id Trinity | FTRINITY_DN55108_c4_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_21047 |
| Sequence | GTTGGATTTGTCCATATAGTGCGTGTCAGATATAAAAAAACGAGTCGTGCAATAAAAAAAGTTGGTTACTATAATCTGAAAATTTGGTGGTTGACATCAC ACGATTCACGATTCACACGATTCACGATTCACGATTCTCTTCTCTCCCACCATGGCCTCTCATCTCTTCAACCTTTCTCTATCTTCTCCACCCAAACTCT CCTTCAACTACTACACTCCTATTCCTCTCTCTCACTTCTTTTCCATTCCTTACTCCAAACGCTGTCGTTTCACTAACCGCAACTCTCTTCGCCGTCCACA TTTCGCTGTCTCCAACTCCTCTCTAACTCATACTTCCTCCCCGCTTCTACTTGACGTCACTGGAATGATGTGCGGCGCGTGCGTTTCACGCGTCAAGAAC ATCTTATCCGCCGACGACCGAGTCGACTCGGTCGTCGTCAACATGTTGACCGAGACCGCCGCCGTCAAGCTGAAGCGACACGAGGACGAGGTGGGAGGCG TTGCGGAGGGGCTTGCTCGGAGATTGAGCGAGTGCGGGTTTCCGACGAAGAGAAGGGCGTCGGGTTTGGGAGTGGCGGAGAATGTGAAGAAGTGGAAGGA GTTGGTGAAGAAGAAAGAGGAACTCGTTGTTAAGAGCCGTAACCGCGTTGCTTTTGCTTGGACTTTGGTTGCGTTGTGCTGTGGATCTCACGCTTCTCAT ATTTTTCATTCTTTAGGGATTCACATTGCTCATGGGCCGATTTTGGAAATTCTTCATAGTTCATATTTCAAAGGTGGTTTAGCTTTGGGGGCTTTATTGG GACCAGGACGAGATTTACTGTTGGATGGTCTAAATGCATTTAAGAAGGGATCGCCAAATATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCCTTTGT CATCAGTTTGATTTCACTACTTAACCCCGGTCTGGCTTGGGATGCATCATTTTTTGATGAACCGGTGATTTTCTCTACTTTCAAGTGTTCCAGTATATGT GATTCGAGATTTTACTACCTTAAACTAAGCAAGAATATGCTACTACTGCTACTCATCTCGGCTTGGATTTTGTTTCATTAGAACCAACAATTTCTTGCCT TCCACAAAATATGCTATTCTTGTCTTATTCGCACTTCCTACTCCATGCTGGTATTATGCTCCTCATGAAAGGATTTCCTCTTTTAGCACGCAGGTCATGC TTCTTGGTTTTGTGCTTCTAGGACGTTCTTTAGAGGAAAAAGCTAGGATTCAGGCATCAAGTGATATGAATGAACTTCTATCACTCATATCTACTCAGTC GAGACTTGTAATTACTTCATCAGAAGGTTCATCATCTAGTGACAATGTGCTTTCCTCTAACTCAATTTGCGTTGAAGTCCCAACTGATGATATTCGAGTA GGTGACTCAGTTTTAGTGTTGCCTGGAGAAACTATTCCTATAGATGGAAGGATCGTATCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACAGGAGAGT CACTTCCTGTATTTAAGGAGGCAGGCCTCACAGTTTCAGCTGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGCTCAAACAC AATGATATCCAAGATAGTACGCATGGTTGAGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCGGATTCAATAGCAGGACCATTTGTATACAGT GTAATGACTCTATCAGCAGCAACATTTGCATTTTGGTATTTTATTGGGTCGAACATATTTCCTGATGTTTTGCTCAATGATATTGCTGGCCCTGAAGGAA ATCCTTTGCTTTTGAGTTTAAAACTCTCTGTAGATGTTTTGGTTGTTTCTTGTCCCTGTGCACTGGGTCTTGCCACACCCACAGCAATCCTAGTTGGCAC CTCACTTGGGGCAAGAAAAGGACTTCTTATTAGAGGAGGGGATGTGCTCGAACGCTTGGCCAACGTAAACTATATTGCTCTGGACAAGACAGGAACCCTC ACCAAAGGAAAACCGGTTGTCTCTGCTATAGGCTCTATTCATTATGAAGAGTCGGAAATTCTTCAGATTGCAGCTGCAGTGGAGAAAACAGCATCTCATC CAATAGCAAAGGCTATTGTTAATAAAGCTGAATCATTAGAGTTGATTCTTCCACTTACAAGAGGACAGTTGGTTGAACCAGGTTTTGGAACCATGGCAGA AGTAGATGGGCGTTTGGTTGCGGTTGGATCTTTACAATGGGTCAATGAACGCTTCCAGACAAGAGTGGACCCATCTGGTTTGATGAATTTGGAACATAGT TTGATGAATCATTCTTCAAATATGACATCTTCAAACTATTCGAAAACTGTTGTTTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATAT CTGACATTGTGCGCGAAGATGCGGAATCTACTGTAACAAGGCTTAAGCAGAAGGGGATTAAAATGATCCTCTTATCCGGAGACAGGGAAGAAGCAGTAGC AACTATAGCAGAGACGGTTGGAATTGAAAGTGATTTTGTCAAAGCTTCACTGTCTCCACAGCAGAAATCTAAATTCATTTCATCTCTGAAAGCTGCTGGA CATCGTGTTGCAATGGTAGGTGATGGGATAAATGACGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTG CCTCGGATGCAGCATCCATTATACTTCTTGGGAACAAAGTTTCGCAAGTATGTCATTTCTGAATTCCTTAATTTATTAATTTGATTTTCTGCATGTCGAG ATTTTACTTTTATGCTTTCACCCTGCATCATTTCATGTATTATTCTTGAGTGATCCTTTTTCCTCCTGCATCTCGGTAAAACACTAGTTGTTTTTTTATT TTTTGACATTTTTTTCCAAGTGAGTAGAAGGACTTGTAGGATAGTTCATAGGAGAATAAACGGTATCTTGTTCTTTTTACAGTGAGCTTTGCTCTCTGCA TACCCAATTCTCTTATGATGGAATTGACCCTCAAAAAATTGAAATTGCTGCTCAAGAGTATGGAAATGTGTTCTAATAAGTATATTCTGTTAGTACTAGC ATATTTGGTACAAAATCCACTTTATTGTTCTCCGGTGTCTTCCTTTACTGACTTTTTATTTGACAGATTGTTGATGCACTAGACCTTGCACAGACAACTA TGGCAAAAGTGTACCAAAATTTGTCTTGGGCAGTGGCCTACAATGTTATTGCCATTCCCATTGCTGCTGGTGTATTACTTCCTCATTATGATTTTGCTAT GACACCTTCACTTTCAGGAGGAATGATGGCTCTGAGCTCCATCTTTGTGGTGAGCAACTCACTGCTTCTACAACTTCATGGGTCTAAGACTTCCACAAAG GGCTCACTCTAGTCACATGTAATAAACATATCTTCTATCCATTACAGCATGGTACAGTGTAAGTTTTGTTAATTAACGGGGGTGGTGATTCTTTCTAATC AAGACAATAAGAGTATGATTTAGGCATTCATCAAATAAGCAGAATTAAGAATCACAAGCAGCAAGCTCCTATTTTGTTGTTATTGTAATTAAAATTTGTG TATAGTTGTGACCAATATCTTGAGTAAGTCTGGTTTTGATGCCATGTTAGAATAGCTCAAGTCAAACTTAATTCAACATTGTTTGTCATATTTTCAATTA GTGTGCAACTATCTTTGTACTATATGAATGCATCAATAAAAGAAAGTTCCAACCATAGGCAGAGGGGGAAGAAATTAGTGATTGATTCAATTCAATAGTA AAATGCTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48638; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21047
| Blastp | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 74.23% of identity |
|---|---|
| Blastx | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 73.81% of identity |
| Eggnog | p-type ATPase(COG2217) |
| Kegg | Link to kegg annotations (AT5G21930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437831.1) |
| Pfam | E1-E2 ATPase (PF00122.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |