| Id Trinity | FTRINITY_DN55111_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_21381 |
| Sequence | GAATATTCTCGGACAACAAGATTATTTCCAGAGATAGTAAAACAAAAAATAAAACTTAAAAGCCAATGGTCACGTTGGCCAAAATTCCACCGCAAGTCTA TACGTCCCCTTCCTCGGTAACCAGTGGAACAATCACGTAAGAATAGGACCCCACCATCACTACACTTTACGTACCAGAAAACCTCCGCCAAGGAGTTTTG TGGATGAGATTCGAGCATAAAAGCTACTCCAAAATAGAAATAAAAAAAATAATAAATCCACAACAAATTATCGTGGCTGAGATTTCTCCTCACTCCATTG CAGTTCCTTCTACTTCAGTTCAATTTTTTATCCGTTTCCTAGTTGCCGGAAATGTCCCCTCCGGCGAGTGTCCACTGAGTTCGCATGCATCATCTTCCTC TTCCATGGATTTATTTCGAGGTTTTGAAGCAGTGAAGTTCGTTTTGTATCATCACCTTACAATAACATTCTGGTTACTATCACTTTCACCACGACGGCTT TACTGTTCAGTGTGCTCCAAGTAACTAAAAATGAACGAAGGTATTTGTATTTCTTGTATCCGCTACTCGTCCGAGAAGATCTGAAGCAACGCTAGCAGCT CATGTCCTAGGATGGAAGCATACTCTTCTGGTGAAGAAATAGTTGTTAAGGCACGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACGGAGGA AGAACACAATAGGTTTCTACAAGCTTTAAAGCTTTATGGACGAGCATGGCAGCGCATAGAAGAACATATCGGAACAAAGACTGCCGTGCAAATCAGGAGC CATGCACAAAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCTTGTTAAGGGTTCATCAATTGGACAAGCTCTTGACATAGACATCCCCCCTCCACGGCCCA AAAGAAAACCAAGCAATCCTTATCCTCGGAAGACCAATGTGGGTGCCCCAACATATCAGGGTGGAGAAAGGGATGAAAAACTCATTCCAGTTGAATCTTC CCATGTTAAACAGACACTGGACTTTGAAAAAGTTCCACTTCTAGAGAAATATAATGACGGCAAAAGGCAAACACATGGAAAGGATAATAAGGATGAGAAC TGCTCAAAAGTATTTCCTGTTCTCCAGGAGGCACCATGTTCATCATCTTCAGGAAACAAGAGCTCAATATCAATGTCAGCGCCACTGAGAAATTCATGCG CATTAAGGGAGATTATATATTCAGTGAAAGAGGCAATATCGCAAGATGAAACAAATGAATCTCTTGTCACTATTGAACCTGAAAATCGGAAGCTGGAGGT AGATGATGGGAAACAGACTAATGGTACCATTAAAGAGTCCCAGTTGGAGAATTGTGATGCTTCACAAGTGAAATTGGTTCAATGTGAGAAAACAGATGGT CTTAATTGCACTTTAACAATAGATGGAATGCAAGGAAATCAGAGTTATCCGAAACATGTTACCGTTCATGTTGTTGATGGGAACCTTGGAACAAGTACTA AAAACCCATCCCTAGATATGTTGTTCCGGGATTCCATGTTTCAACCAATTGGAAAGGTTAACGGGCAGCCTAATCTTTTCACAAATTCAACTGCATCAAA CATAAGCGAAAATCAAAATAACACAGCACCATCTTCTATTCATCACCCATATTTTCCTTATCCTCCCTTTGCACAACATAATCGAGATGATTGCCAACCT TTTCTTCATCTGTCCACCACATTTTCAAGTCTAACTGTCTCTACCTTGCTGCAAAACCCAGCAGCCCATGCTGCAGCAAGTTTGCCTGCTACATTTTGCC CCTATGAAAATGCAGAAACTTCAGCAAATGCTCCTGCATGCTCTCAAGAAAGTTTTCTATCCAGACAAAGTGGCTCCCCTCCCAATGTGGAGGCTATTGC AGCTGCTACTGTAGCTGCAGCAACTGCATGGTGGGCTGCCCATGGATTGCTTCCAGTATGTGCTCCTCTCTATACTGCTTTTGTCTGTCCTACAGCATCA ATGACTGCAGTTCCATCAATGAATATTGATGAAGCAACTGCACCAAACCCAGAGCTAGAAGAGAGTACTCTCCAAAATCCTCCTTTGCAACATCAGATAC TGGATCCAGAACACTCAGAAGCTCAACAAGGTCAACATTCAGCTTCTAAGCCATTGACTGTTATTTCATCAGATTCTAAAGAGAATGGAGATGGCAGTTT AAATACTTCATTAAAGGCTACCACCACTGATCATGAAATGGATACAACAATTTCCGAGAACTTTGATTCTGACAAAACAAAGATCAGAAAACAGGTTGAT TGTTCCTCATGTGGTTCCAATACCACCTCTAGCAGCGATGTCGAGACTGATGCATTAGAGAAGAATGGGAAAGGGAATGAACAGCCTGAAGCACCTGAAC CTGATGCTAACCATTTAATCACAGAGTCTAGTAATCATCGTAGTAGAAGCATTGTCAACCTTACTGATCCTTGGAAGGAGGTGTCTGAAGAGGGGCGAAT GGCCTTTAGGGCTCTTTTCTCCAGAGAGGTGTTGCCGCAGAGCTTCTCACAGCATGATTTAAAAAATAAGGATCATCAAATGGACAACATTAAGGATAAC AAGCAAAACGTAGATAACAAATATGAAGACCTTAACAGCAAGGAATGGTGTTCTGATTGTGAAGGAATGCAGAAAAATCTGCCATTTCTAGAAAATGAGG AGAGGCTGCTAACCGTGGGGCTTGGACAAGAAAAGCTCAAGACTCGCCGAACAGGCTTTATACCATACAAAAGATGTTCAGTGGAGGCCAAGGAAAACAA TGTTGGAACAAGCAACATCCAAGCTGAAGACAAGGATTCTAAGAGAATACGCTTGGAAGGGGAAGCTTCAATTTGAGGAAAAGATCACTTTGGAGTCTCA GTTGACAATGTTATTGGCCTCTATAACTGTGAGGATTCTTCTCTTTGCAAAGCAGATTGCGAAACTGTCCACCTTCCCGGCTGTGATGGAAGCAGTGGTG GTTCCCTTGGTTGCTGTTATCCACTCTCTGACCATAGTATATGGCATGTTGGACAAGGCTTTTCAGTGTTTTCTCAGTTTGGATGCAGGGGATTTTCTAG TTGGGCTGTTTTGAGAGGCTCGAATTCAGGAAAGCGCGGTGTCAAGTTGGAATGGGCTATTCCAAGAAACTCCTCAAGGGAAGTTTGTGCAAGGAATGCA GATATGATAAATGCTACATCAATTGAAGATGGTGTAAGGTGTGTTTGTCAAGATGGATATGATGGTGATGGGTTTACTAATGGATCAGGTTGCTTGCAGT CCTGTATAAAAAATGGACAGGAAGCATATGGAAATGACTGCTACATCAAAGGACATGATCAAAGGAAAATAGTTATCATTGCTGGAATCCTTGGTCCAGT TCTTATTGTTGCCTCCTTGGTTGCACTATTTTATCTTCTTAAAAGACCAATAAAACCGGAGATGCAAGACACCGAGCAGGCTTATTATCACAATGTTTCA ATCCGTAAAGCTTCTAAGCCTCGACTATTCAGCCACCATGAGCTAGAGGAAGCCACCAATGGCTTCGAAGAGAGCCGGAAACTCATGCAAGGTACTAATG GGACAATGTTTGCTGGAGTTCTTGGAGATGGATCACATGTAGCCATACACAAGTTAAAATGTGAGAATGAGAGAGACATAATTCAAGTCCTAGCACAAAT TGAGGTTCTATCTGCTGTTGTACATAGGAACATGGCATGCCTTATTGGATGCTGTATTGACTCTGCATACACTCCTCTAGTAGTGTATGAGTATCCTGCA AATGGTACCTTGGAGGAGCATTTACACCAAAGTAAAGGACAAAGATATGGTTTAGATTGGTATAGGAGATTGAGTATTGCTACCGAAACCGCTTGCGTTG TTGCATTCTTACATTATGAGAACTCTCCTCCCATATTCCATCATAACCTTAAATCTGGCTGCATCTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGG ATTTTGTCTCCTTAATTCCAATTTCAATCACGATTCTCGATTGTACAAGAACCGCGAATGCTTTCGCTTATGCGAAAATGATGTCTATGACATGGGAGTG GTACTTCTCAAGATTATCTCAGGTTCAAATCGAGTGGACTCGCCAACTTTAGCCTTGCAGAAAATAAAAGACGGAAAGATAGAAGAAATCGTCGATCCAC TTCTTTGCTATCACGAACAACCTTATCATCGGCAAGAGCAAATACTAACAATTGCAGACCTTTCAACAAGATGCATGCTATTTGGAGCAGATGGAAAACT TGGAATGATTGATGTTGCAAGAGAGTTAGTACACATAACTCAAGAGAATCTTGATGGAGGAGTTATGAGAGGGCCTGCATTGGAAGAAACATTCTCAAAT TCAAGCCTTCTTCAAATGATATCAATGTCTCCTGATTCTATGAATGTTTCATGAATTTTCCTTCTTCACTGAACATTACAAATCTCATACTACTGTATAT TAGGAAATGTATTGAATAGTGTGGTTAATTGCTATTCCGAAAATTTGAAAATAGTGTTAATCAATTAATGACTATATGTGGTTAATCGCTATTCTTAGAA TTTGAACTCATGATTTTCAAGTTATAAGACAAACTACATTATTAGACTCATGGTCACCCTCTAACATTTTTATAAAAACGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48669; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21381
| Blastp | Protein CCA1 from Arabidopsis with 38.47% of identity |
|---|---|
| Blastx | Probably inactive receptor-like protein kinase At2g46850 from Arabidopsis with 53.11% of identity |
| Eggnog | Transcription factor(COG5269) |
| Kegg | Link to kegg annotations (AT2G46830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461318.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |