Ll_transcript_21385

• Id Trinity: FTRINITY_DN55111_c0_g1_i14
• Name Transcript: Ll_transcript_21385
• Sequence: GAATATTCTCGGACAACAAGATTATTTCCAGAGATAGTAAAACAAAAAATAAAACTTAAAAGCCAATGGTCACGTTGGCCAAAATTCCACCGCAAGTCTA TACGTCCCCTTCCTCGGTAACCAGTGGAACAATCACGTAAGAATAGGACCCCACCATCACTACACTTTACGTACCAGAAAACCTCCGCCAAGGAGTTTTG TGGATGAGATTCGAGCATAAAAGCTACTCCAAAATAGAAATAAAAAAAATAATAAATCCACAACAAATTATCGTGGCTGAGATTTCTCCTCACTCCATTG CAGTTCCTTCTACTTCAATTTTTTATCCGTTTCCTAGTTGCCGGAAATGTCCCCTCCGGCGAGTGTCCACTGAGTTCGCATGCATCATCTTCCTCTTCCA TGGATTTATTTCGAGGTATTCTTTTTCCTTCCCGTGTTTTTATTAATTTCTTATTCTTCTGTTTGGTTCCCGAGAAAATTCAATCACCGCGAAAGCCTTG AACCGATTTACGACTCCGATTTATAGTTGATATGTGTTGATTGTTGATTATTGCCTAATCTTCTTTGTATTTATCATAGCTTAGTGTTTTTGCTTCTTTT GAATCTAAGTTAGATATTTTTCTCATTCTTTCCTTTTTCAGAAAGTTTGTTAGAGGCAGTTATAACTACTTACCATAAATAGTAGTTTTTGTGTATTCTT CATTCATTCAATGGAAAATCAATTTTATCTCATCATGCTTTCTCTCATTTCTTCTTTGGATTTTAAGATGGTATCAGAGCAAAATTTGCTCTGATTCGTC TTCAACCTTTCTCTTCTCTTCTCTCCTTCTTCTTCGCGTTTTTCCCTCTTCCTTCTTCTTCTCTGCAAATCGTGGTTTGCATCATTTCTCTTCTGTTCTT CTTCTCTTCAATTGATTCTCATCAAATGGCGAATCAGAGCTTCGAAGATTACAATGTGAATCCATCCAATCCCTACTTTCTTCATTCGAATGAAAGTCCT GCGTTGGTTCTTGTTTCACCTCTTCTCGATGGGAAGAATTAGCATTCCTGGTCTAGAGCAATGAAATTAGCTCTTCAATCCAAGAATAAACTCCAATTCA TAGATCGTTCAATTCCTCAGCCATCAGTGACTCATCCTCTCTATGCTCAATGGATAAGGTGCAATACAATGATTTTGTCATGGTTACAACATTCTGTTGA GGAGAAAATAGTGAAATCAATACTCTGGATTGATGTAGCAGCAGATGCATGGAAGGATCTTCATGATAGATATTCTCAGGGAGATATCTTTCGTGTTGCT GAACTTCTTGAAGAATTTTACAAGGCAAGTCAAGGCAATCAGTCAATTTCTGATTTCTTCACTCAATTGAAAGAAATCTGGGAAGAAATTGACAACTATA GAGCTATAGGCCATTGCAAGTGTGCTGTGCAGTGTGATTGTGGCATAATTGATCTGGTGAAAATGCATAGGGAACAAGACTATGTGATTCGGTTCCTCAA GGGATTGAATGAACAATATTCTCAAGTGAGATCTCAGATAATGCTGGTTGAACCTCTTCCTCCTATTAGCAAAGTCTTCTCAATGTTGGTTCAGCAGGAA AGGCAATTCAGTGTTCCTATACTTTCAGATCTAAAGGCACTAGCAGTTCAGTCTCAAGGAATTCCTCAATCTAGAAATTATAACAGCAACAGAGGCAGAG GAAACAATTTCTTTAGAGGTAGAGGAAAGCCTTTTCAAAACAATGCTGGAAGAGGCAGCAATAATAGGTTTTGCACTCATTGTGAGAGGACTAACCACAC TGTGGACACATGCTTTTTGAAGCATGGCTATCCACCTGGATATCATTACAACAGATCTGATAGAGTTGCTAATGCTGCTAGTGCTTTCCCTATGGAGATG GATTATGGTACAGGAAGCTTGCAATCTCAGAATGATGATGTGTTTACTGCTGAGAAAAGTCACAAGAGCCAAAACTTCACTGATGCTCAATTTCAGTCTA TTTTGGAGCTTCTTGAGAAGAGCAAACTGAATACTGGCAGGGTCAACTCAGTTGTGAGCAATAGAGTGGAATCTGTTAATGCTACAAATGCTTCTATCAC AGAACAATACCAAGAAGGTGATTGGTATAGCTAGCTTGAGACATGGTTTGTTTGTCATCAGTCCAGTGCAAAGGGATCATTCATGTAATAATGTATCTCA GTCTTGTAATTCTGGTAGTTCCTCTAGTGACTTTAATCTTTGGCATTTAAGGTTTGGTCATGCTCCTTTATTTTCAATGAAAAGTTTATCTAGTCAGTTT GATTGTATTCCTCCATGTAACAACAAACATGTTCCATGTGATGTCTGTCATGCTTCTAGACAGAAGAGATTACCTTTTTGTGATAGCAATACTCAATCAA ATAAAGTTTTTCAGTTGTTGCATGTTGATATATGGGGTCCTTATTCTACTACTTCTATTCTTGGTCATAATTACTTCCTTACTCTTGTTGATGACTTTAC TAGGTTCACTTGGGTGATTATGATGAAAACCAAGAGTGAAACTAGGCAACATATCATTAGCTTTGTTGCCTTGATTGAAAACCAGTTCAGTGTTAAACTT CAGACCATAAGAAGTGATAATGATCCTGAGTTCTTGATGAATGATTTCTTCTCTAATAAAGGAATCATTCATCAAAGATCTTGTGTTGGTACACCTCAAC AGAATGGTGTGGTTGAGAGAAAACATCAACATATTCTCAATGTTGCTAGAGCTGTTTTCCTTCAAGCTCACTTACCCACCAATTTTTGGAATTTTGCCAT TCAACATGCAGTTCACATTATAAACAGACTTCCTAGTCCCTTACTTCATAATTCTAGTCCTTACCAATTACTCCATGGATCTTTACCAAGTTTAGAGTCT CTGAGAGTGTTTGGTTGTTTGGCCTATGCTAGCACCCTTGCTGCAGGAAGGGGTAAATTTGATCCAAGGGCTAGAAAGTGCATGTTTTTGGGTTACAAAG AGGGGACTAAGGGTTACATTCTCTATGATCTTGCTGCTCATAACTTCTTTATGTCTAGAGATGTGGTTTTCTATGAGCATTTCTTTCCCTTGTGTCCATC TAAATCTCAACCACCTTCACATGAGTCAAACACACCTCTTGTTTCTAGTCACTCTCCTCTTGAGTCATACACATTATTGCCTGAGTCAAACACTACTTCT TCTCCTGAGTCCATTACCACTCCTCTAGATGAGTCACACACTTCTTCTGAGTCATACACACCATCTCAGTCCTCTACATCCTCCTCTGAGTCATCCATAA TTCCTTCTGTTGCTGTTCCTAGACAGTCCACTAGGCATAGAAGACCTCCTTCTCATTTGCAAGACTATCACTGTTCTCTTGCTCATGGTTCTGTGAACAA CACCTCTTCTTCTCCTCAAGTTCTTTATCCTTTGGGTTCTGTTTTGGATTACTCCAAGTGCTCACCTAAATACAAGAACTTTTGTCTCACAATTTCAAGT ATTGCTGATCCAACCACCTATAACCAAGCTGTTCAGTTGACTCATTGGAGACAGGCTATGGATTCTGAGTTACTAGCCTTAAATCAGAATAAGACTTGGT CATTGGTTTCTCTTCCACCTGATAAGGTTCCCATAGGCTGCAAATGGGTATATAAGACCAAAGTTTATGCTGATGGTACTCTAGAGAGATACAAGGCAAG GTTAGTTGCTAAGGGCTATACTCAATTGGAAGGGGTGGACTTCTTTGACACCTTCTCCCCTGTGGTAAAGATCACTACTGTCAGAACTGTTCTTGCCTTA GCAGCCATCAAATCTTGGTTTTTGGAACAACTTGATGTGAACAATGCCTTCCTTCATGGAGATTTGCATGAGGAAGTGTACATGACTCCTCCTCCTGGTC TCACCCTTGATCATCCTAATCAAGTCTGCAAGCTCCATAAATCTCTCTATGGACTGAAGCAGGCTAGTAGAGAATGGCATACTACTCTCTCTAATGCTCT AATCTCTCTAGGCTATTCTCATTCTCAAGCAGACCAAGCTTTGTTCACTAAGTCTAGTTCTACTTCCTTCACTGCTATCTTGGTCTATGTGGATGACATG GTATTAGCTGGTGACAATTTTGATGAAATTCAGCAAGTCAAGCAATTTCTTGATCAAACCTTTAAAATTAAGGACCTAGGACAACTTAGGTTCTTTCTTG GTCTTGAAGTTGCTAGAAGGAAGGATGGTATTCACTTGAATCAGAGAAGATATGCCCTTGCTCTTCTTGAAGATTCAGGTTGCTTGGCTGCCAAGCCTGC CAAGGTTCCTTTTGATCCATCACTCAAATTGCAGCTTGATCAGGGTGAGCCATTTGCTGACATTTTGAGTTATAGAAGGCTTGTTGGCAGATTGCTATAC CTCACCATTTCTAGACCTGATTTGGCTTATGCAACTCAACAACTTAGCCTCTTTATGTGCAAACCTATGGTTGTGCACTACAAAGCAGCCTTGCAAGTGC TGCATTATTTGAAGTCTTCTCCTGCACAAGGACTTTTCTTCTCTTCCTCTTCTGCTCTCAAGCTTTCTGCCTTTGCTGATTCAGACTGGGCCTGCTGCTT GGATACCAGAAAGTCCATTACAGGTTTCTGCATTTTTCTTGGCAATTCTCTCATTTCTTGGAAGTCCAAGAAGCAGAACACAGTGAGCAGATCTTCCTCA GAGGCAGAGTATAGAGCCTTGGGCAGCCTGACTTGTGAGGTGCAGTGGCTGAATTTTTTGTTCTCTGACTTGCATGTTCCCTTGCTGAATCCTGCATCTG TGTACTGTGACAACAGGTCTGCCATTTACTTGGCACACAATCCTGTTTTTCATGAGAGATCCAAGCACATTGAGGTGGATTGTCATGTGGTGCGTGAGAG GATTCAGAAGGGTCTTATCCATCTTCTTCCTATTGCCTCCTCTGATCAGTTGGCAGATGCCTTCACCAAGCCTCTACCTTCTTCTTCTTTTCATTCTTTT GTTTCCAAGTTGGTTTGTGTTCACTCTATCACCCAACTTGAGGAGGGATGTTGGCTTGATACTTTCTGGTTCGTGAAGCTTATCTTATTGATTAGTGCTT AGCATACTTTGACTACTATGTGTTAGCTTAGCCATTCATTAAGTGTAATATAAAAGGTAGTTGTATTTTTCCTTTGATAGAAAGCAGTTAAAGGCAGTTG TTTAACTCCATGCTATATATAGTAGTTTTGGACTCTTGTGTATTGGTCCAATTCATTCAATGGAAAATCAATCACATTTCAC
• Tissue: flowers
• Gene name: LI_gene_48669;
• Additional information: details;

Expression of Ll_transcript_21385

FPKM

• FPAB: 0.2
• FPNAB: 0.1
• LF1: 0.1
• LF2: 0.1
• LF3: 0.2
• LF4: 0.1
• UF1: 0.2
• UF2: 0.2
• UF3: 0.2
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_21385

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.51% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.16% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017415203.1)
• Pfam: GAG-pre-integrase domain (PF13976.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;