Ll_transcript_21360

• Id Trinity: FTRINITY_DN55111_c0_g1_i2
• Name Transcript: Ll_transcript_21360
• Sequence: GAATATTCTCGGACAACAAGATTATTTCCAGAGATAGTAAAACAAAAAATAAAACTTAAAAGCCAATGGTCACGTTGGCCAAAATTCCACCGCAAGTCTA TACGTCCCCTTCCTCGGTAACCAGTGGAACAATCACGTAAGAATAGGACCCCACCATCACTACACTTTACGTACCAGAAAACCTCCGCCAAGGAGTTTTG TGGATGAGATTCGAGCATAAAAGCTACTCCAAAATAGAAATAAAAAAAATAATAAATCCACAACAAATTATCGTGGCTGAGATTTCTCCTCACTCCATTG CAGTTCCTTCTACTTCAGTTCAATTTTTTATCCGTTTCCTAGTTGCCGGAAATGTCCCCTCCGGCGAGTGTCCACTGAGTTCGCATGCATCATCTTCCTC TTCCATGGATTTATTTCGAGGTTTTGAAGCAGTGAAGTTCGTTTTGTATCATCACCTTACAATAACATTCTGGTTACTATCACTTTCACCACGACGGCTT TACTGTTCAGTGTGCTCCAAGTAACTAAAAATGAACGAAGGTATTTGTATTTCTTGTATCCGCTACTCGTCCGAGAAGATCTGAAGCAACGCTAGCAGCT CATGTCCTAGGATGGAAGCATACTCTTCTGGTGAAGAAATAGTTGTTAAGGCACGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACGGAGGA AGAACACAATAGGTTTCTACAAGCTTTAAAGCTTTATGGACGAGCATGGCAGCGCATAGAAGAACATATCGGAACAAAGACTGCCGTGCAAATCAGGAGC CATGCACAAAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCTTGTTAAGGGTTCATCAATTGGACAAGCTCTTGACATAGACATCCCCCCTCCACGGCCCA AAAGAAAACCAAGCAATCCTTATCCTCGGAAGACCAATGTGGGTGCCCCAACATATCAGGGTGGAGAAAGGGATGAAAAACTCATTCCAGTTGAATCTTC CCATGTTAAACAGACACTGGACTTTGAAAAAGTTCCACTTCTAGAGAAATATAATGACGGCAAAAGGCAAACACATGGAAAGGATAATAAGGATGAGAAC TGCTCAAAAGTATTTCCTGTTCTCCAGGAGGCACCATGTTCATCATCTTCAGGAAACAAGAGCTCAATATCAATGTCAGCGCCACTGAGAAATTCATGCG CATTAAGGGAGATTATATATTCAGTGAAAGAGGCAATATCGCAAGATGAAACAAATGAATCTCTTGTCACTATTGAACCTGAAAATCGGAAGCTGGAGGT AGATGATGGGAAACAGACTAATGGTACCATTAAAGAGTCCCAGTTGGAGAATTGTGATGCTTCACAAGTGAAATTGGTTCAATGTGAGAAAACAGATGGT CTTAATTGCACTTTAACAATAGATGGAATGCAAGGAAATCAGAGTTATCCGAAACATGTTACCGTTCATGTTGTTGATGGGAACCTTGGAACAAGTACTA AAAACCCATCCCTAGATATGTTGTTCCGGGATTCCATGTTTCAACCAATTGGAAAGGTTAACGGGCAGCCTAATCTTTTCACAAATTCAACTGCATCAAA CATAAGCGAAAATCAAAATAACACAGCACCATCTTCTATTCATCACCCATATTTTCCTTATCCTCCCTTTGCACAACATAATCGAGATGATTGCCAACCT TTTCTTCATCTGTCCACCACATTTTCAAGTCTAACTGTCTCTACCTTGCTGCAAAACCCAGCAGCCCATGCTGCAGCAAGTTTGCCTGCTACATTTTGCC CCTATGAAAATGCAGAAACTTCAGCAAATGCTCCTGCATGCTCTCAAGAAAGTTTTCTATCCAGACAAAGTGGCTCCCCTCCCAATGTGGAGGCTATTGC AGCTGCTACTGTAGCTGCAGCAACTGCATGGTGGGCTGCCCATGGATTGCTTCCAGTATGTGCTCCTCTCTATACTGCTTTTGTCTGTCCTACAGCATCA ATGACTGCAGTTCCATCAATGAATATTGATGAAGCAACTGCACCAAACCCAGAGCTAGAAGAGAGTACTCTCCAAAATCCTCCTTTGCAACATCAGATAC TGGATCCAGAACACTCAGAAGCTCAACAAGGTCAACATTCAGCTTCTAAGCCATTGACTGTTATTTCATCAGATTCTAAAGAGAATGGAGATGGCAGTTT AAATACTTCATTAAAGGCTACCACCACTGATCATGAAATGGATACAACAATTTCCGAGAACTTTGATTCTGACAAAACAAAGATCAGAAAACAGGTTGAT TGTTCCTCATGTGGTTCCAATACCACCTCTAGCAGCGATGTCGAGACTGATGCATTAGAGAAGAATGGGAAAGGGAATGAACAGCCTGAAGCACCTGAAC CTGATGCTAACCATTTAATCACAGAGTCTAGTAATCATCGTAGTAGAAGCATTGTCAACCTTACTGATCCTTGGAAGGAGGTGTCTGAAGAGGGGCGAAT GGCCTTTAGGGCTCTTTTCTCCAGAGAGGTGTTGCCGCAGAGCTTCTCACAGCATGATTTAAAAAATAAGGATCATCAAATGGACAACATTAAGGATAAC AAGCAAAACGTAGATAACAAATATGAAGACCTTAACAGCAAGGAATGGTGTTCTGATTGTGAAGGAATGCAGAAAAATCTGCCATTTCTAGAAAATGAGG AGAGGCTGCTAACCGTGGGGCTTGGACAAGAAAAGCTCAAGACTCGCCGAACAGGCTTTATACCATACAAAAGATGTTCAGTGGAGGCCAAGGAAAACAA TGTTGGAACAAGCAACATCCAAGCTGAAGACAAGGATTCTAAGAGAATACGCTTGGAAGGGGAAGCTTCAATTTGAGGTTTGTTGTTACATATGCATGCA ATCTCATAAAGGGAACCTTTGGTTTTTGCATATAATTTCTTAATCCCCTTAAATGGTGTGCCTATTGTTTATTTCTTATTTTGAAGCTCATGAAACTTGT CGTGTAGAGATGTGTGTACCATGTTAAAATTCTATATATGCTCTTTTACTATCTTGGAGTGATGTTACTGCTATAAAACTCTGCAAAGTTAGATAAGCAG GATACATTAAGAATTGTTTGAACGGTTGAACCTTAAGTAATTGATGATGTATCATTCAGCCACTCCTATTTTACTTTTGACATCTATCTATGAGCTATTC TCCTCTTTTACAAACTATGCCCCGATTGAACAAATTTTCTCTTACATGATATGCTTGTATGATGTGGCAAGTTACTCTTCATCTTAGCCATCGATTTTTT GGGTGAGGATCAAGTTACTCTTCATCTTAGCCATCGATTTTTTGGGTGAGGATCAAGTTACTCTTCATCTTAGCCA
• Tissue: flowers
• Gene name: LI_gene_48669;
• Additional information: details;

Expression of Ll_transcript_21360

FPKM

• FPAB: 25.6
• FPNAB: 17.1
• LF1: 11.2
• LF2: 13.8
• LF3: 15.8
• LF4: 17.4
• UF1: 8.1
• UF2: 11.2
• UF3: 17.3
• UF4: 21.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_21360

• Blastp: Protein CCA1 from Arabidopsis with 38.47% of identity
• Blastx: Protein LHY from Arabidopsis with 62.64% of identity
• Eggnog: Transcription factor(COG5269)
• Kegg: Link to kegg annotations (AT2G46830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461318.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;