| Id Trinity | FTRINITY_DN55111_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_21369 |
| Sequence | CATGCTGATGGAACTCTTGAAAGACATAAGGCCAGGTTGGTTGCAAAAGGATACACTCAATTAGAGGGAGTTGATTTTTTTGACACTTTTTCTCCTGTTG TAAAGATTACAACTGTGAGAACTGTCTTAGCCTTAGCAGCAATCAAGGGATGGTTCTTGGAACAACTTGATGTTAACAATGCTTTTCTTCATGGAGACTT ACATGAAGAAGTCTATATGGCTCCTCCTCCTGGTCTTGTTCTAAATGATCCTAGTCATGTATGCAAATTGCATAAATCCCTATATGGCCTGAAGCAAGCC AGCAGAGAGTGGCATACCACTCTTTCATCTTCCCTCATTTCTTTGGGATACTCTCACTCTGAGGCAGATCAAGCTTTGTTTACCAAGGCTGATTCTCAAT CATTCACTGCAATCCTGGTTTATGTAGATGATATGGTTTTAGCAGGGAATGATACTCATGAGATCACTCAAGTCAAACAATTTCTTGATCACACTTTTAA AATCAAAGATCTAGGATCTCTCAGATTTTTTTTGGGGCTTGAAATAGCTAGAACCAAAGATGGCATACATCTCAATCAGAGAAAATATGCCTTATCTCTT CTTGAGGAGACTGGAACTCTTGCTGCTAGGCCTGCAAAAGTTCCCTTTGATCCATCCCTCAAATTGCAGCTTGAGCAGGGCAACCCTTACCATGATGTGT TAGGCTATAGAAGGCTAGTTGGTAAATTGCTCTATCTTACCATTTCTAGACCTGATATAGCTTATGCAGTGCAGCAATTGAGCCTCTTCTTATGCAAACC TATGGATGCTCATTATAAGGCAGGCCTCAAGGTTTTGCACTATCTCAAAACTTCACCTGCACAAGGCTTGTTCTTCTCTGCCAATTCTGCTCTCAAGCTT TCTGGATTTGCTGATTCAGATTGGGCTTGTTGTTTGGATACCAGAAAGTCCATAACTGGGTTCTACATTTTCCTAGGCTCTTCCTTGATTGCTTGGAAGT CAAAAAAACAGAACACAGTTAGTAGGTCTTCCACTGAAGCTGAGTATAGGGCTCTTGGTAGCATTGCTTGTGAGCTGCAGTGGCTTAATTTTTTGTTCAC TGATTTGCACATACCTTTGCTCAATCCTGCTTCAGTCTATTGTGACAATAGATCAACCATCTATTTGGCTCACAATCCTGTGTTCCATGAACGTTCCAAG CATATTGAAGTGGACTGCCATGTGATTCGTGAGAAAATTCGTCAAGGCCTCATTCATCTTCTACCAATCAGCTCCAAAGATCAATTGGCTGATGCCTTCA CAAAACCTCTTCCTTCTGCTTCTTTTCTCAGTTTCATTTCCAAGCTGGGTTTGTGCTCCATCCACGACCCAGCTTGAGGAGGGGTGTTGATTGTTGATTA TTGCCTAATCTTCTTTGTATTTATCATAGCTTAGTGTTTTTGCTTCTTTTGAATCTAAGTTAGATATTTTTCTCATTCTTTCCTTTTTCAGAAAGTTTGT TAGAGGCAGTTATAACTACTTACCATAAATAGTAGTTTTTGTGTATTCTTCATTCATTCAATGGAAAATCAATTTTATCTCATCATGCTTTCTCTCATTT CTTCTTTGGATTTTAAGATGGTATCAGAGCAAAATTTGCTCTGATTCGTCTTCAACCTTTCTCTTCTCTTCTCTCCTTCTTCTTCGCGTTTTTCCCTCTT CCTTCTTCTTCTCTGCAAATCGTGGTTTGCATCATTTCTCTTCTGTTCTTCTTCTCTTCAATTGATTCTCATCAAATGGCGAATCAGAGCTTCGAAGATT ACAATGTGAATCCATCCAATCCCTACTTTCTTCATTCGAATGAAAGTCCTGCGTTGGTTCTTGTTTCACCTCTTCTCGATGGGAAGAATTAGCATTCCTG GTCTAGAGCAATGAAATTAGCTCTTCAATCCAAGAATAAACTCCAATTCATAGATCGTTCAATTCCTCAGCCATCAGTGACTCATCCTCTCTATGCTCAA TGGATAAGGTGCAATACAATGATTTTGTCATGGTTACAACATTCTGTTGAGGAGAAAATAGTGAAATCAATACTCTGGATTGATGTAGCAGCAGATGCAT GGAAGGATCTTCATGATAGATATTCTCAGGGAGATATCTTTCGTGTTGCTGAACTTCTTGAAGAATTTTACAAGGCAAGTCAAGGCAATCAGTCAATTTC TGATTTCTTCACTCAATTGAAAGAAATCTGGGAAGAAATTGACAACTATAGAGCTATAGGCCATTGCAAGTGTGCTGTGCAGTGTGATTGTGGCATAATT GATCTGGTGAAAATGCATAGGGAACAAGACTATGTGATTCGGTTCCTCAAGGGATTGAATGAACAATATTCTCAAGTGAGATCTCAGATAATGCTGGTTG AACCTCTTCCTCCTATTAGCAAAGTCTTCTCAATGTTGGTTCAGCAGGAAAGGCAATTCAGTGTTCCTATACTTTCAGATCTAAAGGCACTAGCAGTTCA GTCTCAAGGAATTCCTCAATCTAGAAATTATAACAGCAACAGAGGCAGAGGAAACAATTTCTTTAGAGGTAGAGGAAAGCCTTTTCAAAACAATGCTGGA AGAGGCAGCAATAATAGGTTTTGCACTCATTGTGAGAGGACTAACCACACTGTGGACACATGCTTTTTGAAGCATGGCTATCCACCTGGATATCATTACA ACAGATCTGATAGAGTTGCTAATGCTGCTAGTGCTTTCCCTATGGAGATGGATTATGGTACAGGAAGCTTGCAATCTCAGAATGATGATGTGTTTACTGC TGAGAAAAGTCACAAGAGCCAAAACTTCACTGATGCTCAATTTCAGTCTATTTTGGAGCTTCTTGAGAAGAGCAAACTGAATACTGGCAGGGTCAACTCA GTTGTGAGCAATAGAGTGGAATCTGTTAATGCTACAAATGCTTCTATCACAGAACAATACCAAGAAGGTGATTGGTATAGCTAGCTTGAGACATGGTTTG TTTGTCATCAGTCCAGTGCAAAGGGATCATTCATGTAATAATGTATCTCAGTCTTGTAATTCTGGTAGTTCCTCTAGTGACTTTAATCTTTGGCATTTAA GGTTTGGTCATGCTCCTTTATTTTCAATGAAAAGTTTATCTAGTCAGTTTGATTGTATTCCTCCATGTAACAACAAACATGTTCCATGTGATGTCTGTCA TGCTTCTAGACAGAAGAGATTACCTTTTTGTGATAGCAATACTCAATCAAATAAAGTTTTTCAGTTGTTGCATGTTGATATATGGGGTCCTTATTCTACT ACTTCTATTCTTGGTCATAATTACTTCCTTACTCTTGTTGATGACTTTACTAGGTTCACTTGGGTGATTATGATGAAAACCAAGAGTGAAACTAGGCAAC ATATCATTAGCTTTGTTGCCTTGATTGAAAACCAGTTCAGTGTTAAACTTCAGACCATAAGAAGTGATAATGATCCTGAGTTCTTGATGAATGATTTCTT CTCTAATAAAGGAATCATTCATCAAAGATCTTGTGTTGGTACACCTCAACAGAATGGTGTGGTTGAGAGAAAACATCAACACATTCTATGTGTTGCTAGG GCCATTTTCTTTCAATCATCCTTGCCTACTAATCTTTGGAACTTTGCTATTCAACATGCTGTCCATATCATTAATAGGCTTCCTAGTCCTTTGCTAAAGA ATTCTAGTCCCTATCAACTATTGTATGGTTGCCTTCCCTCTCTTAATTCCCTAAGAGTATTTGGTTGCTTGGTGTATGCAAGTACTCTTAGTGCAGGGAG AGGCAAATTAGATTCCAGGGCTACGAAATGCATGTTCATTGGATACAAGGAAGGATCCAAAGGTTTCATCCTATATGACCTAGTTTCTCATGAACTTTTT ATTTCTAGAGATGTTGTTTTCTATGAAGAACACTTTCCTATGTCAGCTGCTTCCACTACTCCTTCTGATCCTCTTGTTCATCATACTCATAATTCCAACA TTCTTGAGTCAAACATTTTTTTTTTGATTGAGTCAAACACACAATCTGTCCCTGAGTCTCATTCTCCAACCTCAAACACATTTTCCTTTATTGAGTCAAA CACACAATCTGTTCCTGAGTCCAATTCTCCAACCTCAAATTCTTCTTCTTTTGAGTCAGACACTACTTCTTCACCTGCTATTGTTCCTAGGCAATCTACA AGACAGAGAAGACCACCTTCTCATCTTAATGACTACCATTGTAACCTTGCTCACACTGTCACAGAAACTGGCTCTTCCTCAAAAGTTGCTTACCCCTTAT CTTCTGTTTTGGATTACTCCAAGTGCACTCCAGGGTATAAAAACTTTTGCCTAACCATCTCCAGTAGTTCTGATCCTACTACTTACAAAGAAGCAGTTGA ATTCTCTCATTGGAGACAAGCCATGGACACTGAATTAGAGGCCTTAACCCAAAACAAAACTTGGTCCTTGGTGCCTCTTCCACCAGACAAGGCTACCATT GGTTGTAAATGGGTTTACAAGACCAAAGTTCATGCTGATGGAACTCTTGAAAGACATAAGGCCAGGTTGGTTGCAAAAGGATACACTCAATTAGAGGGAG TTGATTTTTTTGACACTTTTTCTCCTGTTGTAAAGATTACAACTGTGAGAACTGTCTTAGCCTTAGCAGCAATCAAGGGATGGTTCTTGGAACAACTTGA TGTTAACAATGCTTTTCTTCATGGAGACTTACATGAAGAAGTCTATATGGCTCCTCCTCCTGGTCTTGTTCTAAATGATCCTAGTCATGTATGCAAATTG CATAAATCCCTATATGGCCTGAAGCAAGCCAGCAGAGAGTGGCATACCACTCTTTCATCTTCCCTCATTTCTTTGGGATACTCTCACTCTGAGGCAGATC AAGCTTTGTTTACCAAGGCTGATTCTCAATCATTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48669; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21369
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.7% of identity |
|---|---|
| Blastx | Copia protein from Sophophora with 38.46% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416681.1) |
| Pfam | GAG-pre-integrase domain (PF13976.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |