Id Trinity | FTRINITY_DN55116_c4_g1_i5 |
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Name Transcript | Ll_transcript_21535 |
Sequence | CCAATTGACAATGAGAGGAGTAGCCCAATGGGTATTTAAACCATTCCCGAGACAATGAGGTAAGCGATGAGACTTACTTTCTAACAGTCATGTACTAGTG TAGTCTTATAAATGAGATTGTAGTGCGTAGTTGTTTCTGATGCAATATTCATGTACCTCCATTCCTAATCCTCTTTAAGTACACAGGAGTTAGGACAGTA CTAAAACAAGAAGAAGACTTAGATTTGCTTAGGTTGTAGTGCTTTGAGAATTAACTTCATTCTCTATGTCATATTTTTTCTTATATTTCATCTGCTTTCT CCATCTTTTGATATCTCCTTTTTATCATATTAATAACATTAATGGTATTAATCCTCAGTTGTTTATGCGTTCCTTTTTTTCAACTGTACAGATTTCTACC GGTTATTTTCTAGCAGATGTGACAATGATTCTTTGGAATTTTCCGGCTTTAGGTGGTCTGGAATATGTTCTACACCATGGGTTATCCATGTTATCACTGA TTCAATCTTTGCTGAGTGGCCAAGGACAGATCTACATACTGATGGTTCTTTTCACCGAGAGCACAACTCCTTTTGTAAATCTAAGATGGCACTTGGATGT TGCTGGTCGTAAGAGCTCAAAACTTTACATCTGGAATGGCATTGCATTGTTCTTAGGGTGGTTGGTTGCAAGGATTATACTATTCATGTTCTTTTTTTTC CACATGTGGACCCATTTTGATGAGGTGAAGAAGATCTTCCCATTGGGTTTTTACACCTTGCTTGTGGTGCCTCCAATATTGTCAATTATGAACATATTTT GGTTCTGGAAGATTGCAAAGGGTATGGTCAAAACTCTTTCAAAAGCAAAACATAGCAAATGAGTTTACTACATGTCCTAAGCATCCAAAGTATACTGATT CATGGAATGTCCATTGAATTCATTGATTACAGTTGTAATCAACATTTAATATTTGTAAGAATATGCTATATATTTGGCATTACCCCATTAAATATATTGT GACTAATAGTCGAAAATTTTATACATAGTATGATCATTAGAGTGTATGTATTTAATTATTTACAACAGTCATTGTCTGTCATAGCACATGACTTCGGAAG AATAATTTTAATTTAGTTCCCTTTTATTTTTAATCTTTCTATTAA BLAST |
Tissue | flowers |
Gene name | LI_gene_48714; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21535
Blastp | Transmembrane protein 56 from Mus with 28.22% of identity |
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Blastx | Transmembrane protein 56-A from Xenopus with 27.81% of identity |
Eggnog | Family with sequence similarity 57, member(ENOG410XPW0) |
Kegg | Link to kegg annotations (99887) |
CantataDB | Link to cantataDB annotations (CNT0000251) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419997.1) |
Pfam | TLC domain (PF03798.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |