| Id Trinity | FTRINITY_DN55118_c2_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_21008 |
| Sequence | AAAGAAATGAAATGATAAAATGATGCAATCTTTTTTCTCTTTAACTATCATTCTCAATTTGTCATGTTATTTATATCTTTGTTACTTTTTACCTTACCCA TAATTTTCCAGCCACGGTTCCGGTCATCCATATTTGTAAATACCAATGATTCATCCACGTGAACGTGATGCATTTAATCTAAGTTATACAAACATGGACA GTCAAAGGGGAAAAATCTAGGAACATTTTATTCAGCAGCGAAAGCAACGCACCGTCATTGTTGACACTTCATGTCCAAAAGAAGAAAAAGTAATTGCTGT CTTCAACTCAACTGTGTAAGCCTTATAGGTAAATCCTCACCAGTTCTCATATCCTGGTTTCCAGCTTCCAATTTAATCCTGGTCTTATCATGAGGTAGTA CTACTTTTTATACTTAATTTGCAAATTTGTAGCTTCGGTAGCTCTCTTTGTAAATTATTGTTTTTGTTTCGAATCTATACCGGTCCAAAAATAAAATTGA AAACCGGTCAAACCGACAGCGAAAGGCGCTAGTACCAATTGTTTTGGATTAGTTGTGGTGGGCTTGGATGCTGCTGCAATTGATCCACTAATGGGATTCC AGTTCATATTGTTTCTCTTTTTGGCTTCTCTTCGAGTTGGAGTGACTTTAAATCAAGATGTTGCACATGGTTCTCTTCAAGTACATGGAACTGAAGCAAA AGCTGAAACTGGTGATAATTTTATTTGTGCTACTATTGATTGGTGGCCACATGATAAGTGCGACTATAGCCATTGCCCCTGGGGATATTCATCTGTTGTA AATTTGGACTTGACTCATCCTTTCCTTGCCAAGGCAATCCAAGGTCTCTATGTTTGTATTACTCAAGTCCATATGATTTACAAAATTCAGTTACTCAACT CTCACCGCAAAATGTTGCAATGTTTGTTTTTTATGAATGTCATTATTTATGGTATGGAATAGGTACTTTAAGGATGATTTTATTCTTTTCATAATGGTTT CATGATAGCTCTGAAGCCTTTGAGGATAAGACTTGGAGGTTCTTTGCAAGACCAGGTGATATATGATGTAGGAAGTTTGGGGTCTCCTTGTCATCCATTT CAAAAGATGAAAGACGGTTTGTTTGGATTTTCAAAGGGATGTTTACACATGAAAAGGTGGGATGAGCTGCATCATTTTTTCAATGAGACAGGGGCCATTG TGACATTTGGACTCAACGCACTTCGTGGGAAGCATCAGAGTAGTCTTCATGTTTGGGATGGACAATGGGATCCTAGGAATGCTTATGATTTTATAAAGTA CACTATCTCAAAGGGATACAAGATTGATTCATGGGAACTTGGTAATGAGTTGAGTGGTAAGGGCATTGGAGCATCTGTTGGTGTTGCACAGTACGGGAAA GACTTGATTAAACTTAAACAAATTCTTGATACATTATACGAGAACTCCAACTTCAAACCTTCACTTGTAGCACCTGGGGGATTTTATGAAAAGGAGTGGT ATGACAAGCTTCTTCAGGTTTCGGGTTCAGGCATAATTAATGTTCTGACACATCACTTATATAACTTAGGCCCAGGTTTGCTTGTCACTTATTTAGTTCT TTCTACTATAGTCATTCTTACAGATATTTAATACTCTGAAATATGTTTGGTGTAATTCTGCTTTTTCGTCTGTTCTGATTTCTTGTAACTGTAAGTAGTA TTACACTGTCATTGGTTACTATCAGTTGAGGGAATAAGACACATGTTTCATTGGTTCACTATTGTTTATTTCATAAACAAGAGGGTTGCTGCTTCTTCTC ATTTATATATTATATTCGTTAAAGCAACAATGCTTCCTCTTCTGAAAAACCAAATAAACGCAAGATAATATAGAATGTGAAATTTTGACTAAAGTAATAT TAACCAAAGAGCTATTATACATTGATGTTTGGCTATGCCAATTTTTGTAGTGATACCTCTTAGCCTCCCCTCTGTACTTCCCCACCTCTTTGGTTATCTT AGCTACCGAAAGTCGTTTACACCAATATGAATGTCGACATGGTAGCGTTCCATGCCAACAGGCAAAACTACCCCATGTCTACTTAAATGCACTGTGCTTT TGTGCTTAACTTTCCATCTTTTTATGCTTAATTTTCTCATAAATGCTATTTGTCCTATACATTGAGAGACATGCACAAGCAGCTGATATATTTAATTGAA TATGAACTTGTATCGGGGATATTGATTTTGTTTACTTGCTGGGAAATTTCTATTTGCTAATCAGTTTATAAGTTAATTCTATCTTTTAGGTAGTGATGCA CATCTTGAACAGAAGATTCTAGATCCCGTGCGCTTGAGCAAGATAGAATCTATTTTTAGCAATCTTACGGAAACCATTCAAAAACATGGTCCTTGGTCTT CTGCATGGGTAGGAGAAGCTGGTGGGGCGTACAACAGTGGTGGTCGTTATGTTTCTAACACATTTGTCAACAGCTTTTGGTATTTAGATCAACTTGGAAT GGCATCCAGGTACAGTACTCAAGTTTATTGCAGACAGACTTTAATTGGAGGGAACTATGGTCTTCTCAATACCACCACTTTCACTCCTAATCCAGACTTC TACAGTGCACTTTTGTGGCATCGGCTAATGGGAAAGACGGTACTTGAAGTTTCTACTGATGTTTCTTCACCCTTTTTACGCACTTATGCTCATTGTTCAA AAGACAGAGAGGGTGTAACGTTACTACTGATTAACTTAAGCAATCAGACTCATTTCGTAGTCACTGTTCAAAGCCATGTGATTGAAGGAAATGAAGTGAC CAAAAACATCCATAAAGAAAATTCATTCTTTGAAAATCTCAAGAATGTGTTTTCCTGGGTTGGAACAAAAGGATCAGAAGTCACATTCAGAGAGGAGTAC CATTTAACTCCGAAAGACGATTATCTTCGGAGCCAAACCATGGTCCTGAACGGTATTCCACTACAATTAACTAATGAAGGAGATATTCCAACACTTGATC CAGTACTCAGTAATGTACATTCCCCGGTATACATAGCACCCTTATCCTTTGCATTTATTGTATACCCCAACTTTGATGCTCCAGCTTGTGCTAGGCACCG AAAACTTTAGTCTAAAGATCTATATTTTTGCACTAGTACTACGAAATTGAAAACTCATGATAATTGTGATTAGTGACCTATCTCTCTTCACAGGAAGTTT GTTTTACTTTTAAGTTTATGCAAAGCATTTCAGTTTTCTTTAGCAGACAGTTATTACAATAAATTTGGTCTAGTTATTCATGTGCCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48728; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21008
| Blastp | Heparanase-like protein 1 from Arabidopsis with 67.02% of identity |
|---|---|
| Blastx | Heparanase-like protein 1 from Arabidopsis with 60.52% of identity |
| Eggnog | Heparanase(ENOG410YDJW) |
| Kegg | Link to kegg annotations (AT5G07830) |
| CantataDB | Link to cantataDB annotations (CNT0000532) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417534.1) |
| Pfam | Glycosyl hydrolase family 79, N-terminal domain (PF03662.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |