| Id Trinity | FTRINITY_DN55124_c6_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_20838 |
| Sequence | TTACTTACATAGATACTAATAGAAATCCACTCTGCTCCCAGAGGACGATATAATGGTACTCTATCAGATTATATTACTTGTACAATACGGTATGCTTGCC TTTACGTAATAAAATCATAGCCATTCTGCAGAAAACGGGAAGTATGAGAATCAAGATGCAGTGACAAACTTGGTTTTTAGTTTTTTACCTCAAATAGACA CACGGTCTCTGTACCATCTGGAACATCGCTTGAATACACTAAGAATGAAGTCGTCTGGCTGATTAAATACACTGATGTATAAAACATGAGATTGACTTTA ATATAGGCAATTCAAGTTGAATAAATATATTGACAGATATAGTATTTTAAACATATTTTTATCCAAGCATCATATACATCTACAGTACTGCAAGGGATTG TCAATCATCGTACAATGATGTTATTTCGAGGAAGGAAAAAAAAAAGATAGAGGGATTGCTCCTTAAAAAATCTCACGTCTTATACTCAAACCTTATCAAG TCAAGCAACCTTAGATGGATATCAATTATCAAACTTGTTGCAAAATGACAAGCAACACGCTGTCAGTGAGGGTACTAGCATGAACTTTATCCTCATTAAA ACTAACCACAAGTTCCATCTCTAGAACAACTTGCGAAATTAGATTGTAATTGTTTTACTTCATATGCACCTTTTGGCTCTTTTGTCGGCAATATTCAGCG GGACTGAATGTATCATAATGAGAAGCATATCCCTGTCTTATCATGTCCAAAATAAGAGGTTTATAATCTTTTCTGTTATGAAATGATTATTGTTGATTAA AAGTGACGCCAACTTCTTAAAACAATACTTCGATCCCAGATAGATGTATTTGTGGGAAAGAGAGAGCCGTTTTTTTAATCCCGTTCACTCTGCATGTGGA AATATCATTTACACATTTAATGGTCACATGTTCATGACAATTAACTTAAGTAGCGGTAGATGGAGGAACTAACATTAGTTTGTAAGCACAAATGTAAGAA TTAAAGTGGTAATCAGTTTTCTTTTGACACTTCATTAGTATGATATACAGGGAAATCTACCTGAAATCATTGTTTTTTTAAAAGTATTCCCATAACTTTT ATTTAGAAATTAAATTAAATAAAAACCCACAGCTTTTCATTTTATATTTATTTTTTCTAACCTTTTAGACCCTGACTATGAATATCCTAAATGACTGACC AGTTTGCCAGGTTAGCAGGTACGAGCCTAATAGGGCTGTACAATGTATCAATTCAATCCAATTGTGACTTGTGAAGCAAAGCAAGAACAGAAAGATTTAG ATTCATTATAGAACTAGCTATATTTGAAAGTGGATTTCTCAGCCACACAAAAAAAGAGGTTGAAAATGGGAATTTTGTTTCTTTTCTAATTGATCGTTCT CGTTGCCACTGCGTGCAGGCAACAGGAACATAGTAGAAATTTGCGTGCAAGTGAACAACAGCCACGTTGCTTAACCATCATTTCCCCACGCCTTTCTCAA ACCACAAAAATATCTAAGTAGAAAATACATTTGATTCGGATAATCTCATTCCTAAGGACCGTAACCGCATCACATGAACGGTACTCAGAAGCCCACGTGG AAAAATCCACAATTGTTATTACTGATAGTTCTCCTCCACCGAAATATATTATAGGTGTTGAATCGGGAAGAATAGATATATACAGTATTACATTTGTAAA TGGAAGGTCAATTTACATTATTTAAATTTATCGACCTCTAAGTCACAAGATAAATCTCGAAAAATATCCATTGTTATTTATCAGTGAGCTTTAATATCTC CATTCTCCTTTTCCAACCAAAGAATTGAACCAGGATTTAAAACAGAAACACAATTCTGCAGCTTAAATTGAACAACTAAATGCTGAGATTAAATGTCTAC TGTTCTCTGATTCCAAGTGCAAATCAAGCTAGACCACTCAGCAGCTATGATTCATTGATCATCCATAAACGAAGAGCTTCAAGATTTTCTCATGGAATTT CCATCAAGGCCAAGGCCATAAAAGATGAAATGGATGGGGAAACAAGTGGGTCTTCAGGACGTAGCTGGGATCCTGGGTTGGAAATCGAGGTCCCTTTTGA GCAGAGACCGGTGAATGAGTACTCATCTCTGAAGGATGGAATATTGTATTCATGGGGTGAACTGGGTCCAGGGTCCTTCTTCCTTCGCCTTGGAGGCCTC TGGTTGTCAGTGTTCATAGTTCTTGGAGTGCCAATTGCAGCTGCAAGCTTTAATCCTTCTAGGGAGCCTCTAAGATTTGCACTAGCTGCTGGAACAGGAA CTCTCTTCATTGTCTCTTTGATTGTTTTGAGGATTTATCTGGGTTGGAGTTATGTTGGTGATAGACTTCTATCAGCGGTCATTCCTTATGAAGAAAGTGG CTGGTATGACGGACAGATGTGGGTCAAGCCACCTGAGGTTAGCCTCTCACCTCTTTCCTTTGCCAAGAGATAACAGAAAAGTACCTCTTAAGAAGTAACA CTTTCATAAAACTATATATATTCAAGGTGGCAAATTCAATGAGCCGAAGGAAAGATTATGTTGCAAACCAACAAAATCATACCCCTATTAGAGGCTGGAT ATTAGAAAGTATACACTATTGAATATAAAATCAACCTTTTTAGATGTTGCTTGCAATTTGGCACTTGGTACCAAGACAAAATCAACTACTGGCCTTTTTA GCAAAAGACGGAACAATAGAAAACATTAAATTTAATTTAGAGATAAAGGTGAACAAATAATAGGTTAGCCACTGTTGAATTTCAAATTGTAGAAGATACT GGTTCATTGAGCAATAAGCAATCTGTTCAAAATTATTGCATACATAGGATATGGAATAAGGGCGGACTAGTGTATAAGACTCCCATCTAGTGGGATTCGG AAAGGGTAGATGTACGTAGGTTATGGAATAAATATAGCTAAAATGTCCTAACAATAACTACTAAAGGAAATAGTGACATGCTTTGTTTATCTCATTTCAG GCACTATAAACTGAAAACTTGGCTTTCTTTGCAGATCCTAGCTCGTGATAGATTGTTGGGCTCTTACAAGGTACTGGAGATTTGAAATAACACAACATTG CATCAACTCATCATGCTGGATTTTTTTAATGCAGGCTAGAAGAGCAATATGATAAACTTGATTTCTATGTCTCCAGGTCAAGCCAGTTGTTAAACTTCTG AAGCAAACTCTTGTCGGTACAGGAGCATTACTTGTTACTGGAGTTATGCTATTTATTTTTGCTACACCTGTGGAGAACTTTTTTCGAACCACCTTTACCA CAGTAGAAAATAAATCTACCACTCAAACTCCAAAAGTTAACACAAAGTTCAACCTAAGGTAAGGAAAGACATAAAGATCCTGCACCATCTTCCTCACTAT TTCAACCAGGTAATTGCAATTTTTTATGTGCCTTGTAGGAAGGAGGAGTTGCTTCAATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48764; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_20838
| Blastp | Uncharacterized protein ycf36 from Porphyra with 42.98% of identity |
|---|---|
| Blastx | Uncharacterized protein ycf36 from Porphyra with 44.07% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421174.1) |
| Pfam | Protein of unknown function (DUF1230) (PF06799.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |