Ll_transcript_20839

• Id Trinity: FTRINITY_DN55124_c6_g1_i3
• Name Transcript: Ll_transcript_20839
• Sequence: TTACTTACATAGATACTAATAGAAATCCACTCTGCTCCCAGAGGACGATATAATGGTACTCTATCAGATTATATTACTTGTACAATACGGTATGCTTGCC TTTACGTAATAAAATCATAGCCATTCTGCAGAAAACGGGAAGTATGAGAATCAAGATGCAGTGACAAACTTGGTTTTTAGTTTTTTACCTCAAATAGACA CACGGTCTCTGTACCATCTGGAACATCGCTTGAATACACTAAGAATGAAGTCGTCTGGCTGATTAAATACACTGATGTATAAAACATGAGATTGACTTTA ATATAGGCAATTCAAGTTGAATAAATATATTGACAGATATAGTATTTTAAACATATTTTTATCCAAGCATCATATACATCTACAGTACTGCAAGGGATTG TCAATCATCGTACAATGATGTTATTTCGAGGAAGGAAAAAAAAAAGATAGAGGGATTGCTCCTTAAAAAATCTCACGTCTTATACTCAAACCTTATCAAG TCAAGCAACCTTAGATGGATATCAATTATCAAACTTGTTGCAAAATGACAAGCAACACGCTGTCAGTGAGGGTACTAGCATGAACTTTATCCTCATTAAA ACTAACCACAAGTTCCATCTCTAGAACAACTTGCGAAATTAGATTGTAATTGTTTTACTTCATATGCACCTTTTGGCTCTTTTGTCGGCAATATTCAGCG GGACTGAATGTATCATAATGAGAAGCATATCCCTGTCTTATCATGTCCAAAATAAGAGGTTTATAATCTTTTCTGTTATGAAATGATTATTGTTGATTAA AAGTGACGCCAACTTCTTAAAACAATACTTCGATCCCAGATAGATGTATTTGTGGGAAAGAGAGAGCCGTTTTTTTAATCCCGTTCACTCTGCATGTGGA AATATCATTTACACATTTAATGGTCACATGTTCATGACAATTAACTTAAGTAGCGGTAGATGGAGGAACTAACATTAGTTTGTAAGCACAAATGTAAGAA TTAAAGTGGTAATCAGTTTTCTTTTGACACTTCATTAGTATGATATACAGGGAAATCTACCTGAAATCATTGTTTTTTTAAAAGTATTCCCATAACTTTT ATTTAGAAATTAAATTAAATAAAAACCCACAGCTTTTCATTTTATATTTATTTTTTCTAACCTTTTAGACCCTGACTATGAATATCCTAAATGACTGACC AGTTTGCCAGGTTAGCAGGTACGAGCCTAATAGGGCTGTACAATGTATCAATTCAATCCAATTGTGACTTGTGAAGCAAAGCAAGAACAGAAAGATTTAG ATTCATTATAGAACTAGCTATATTTGAAAGTGGATTTCTCAGCCACACAAAAAAAGAGGTTGAAAATGGGAATTTTGTTTCTTTTCTAATTGATCGTTCT CGTTGCCACTGCGTGCAGGCAACAGGAACATAGTAGAAATTTGCGTGCAAGTGAACAACAGCCACGTTGCTTAACCATCATTTCCCCACGCCTTTCTCAA ACCACAAAAATATCTAAGTAGAAAATACATTTGATTCGGATAATCTCATTCCTAAGGACCGTAACCGCATCACATGAACGGTACTCAGAAGCCCACGTGG AAAAATCCACAATTGTTATTACTGATAGTTCTCCTCCACCGAAATATATTATAGGTGTTGAATCGGGAAGAATAGATATATACAGTATTACATTTGTAAA TGGAAGGTCAATTTACATTATTTAAATTTATCGACCTCTAAGTCACAAGATAAATCTCGAAAAATATCCATTGTTATTTATCAGTGAGCTTTAATATCTC CATTCTCCTTTTCCAACCAAAGAATTGAACCAGGATTTAAAACAGAAACACAATTCTGCAGCTTAAATTGAACAACTAAATGCTGAGATTAAATGTCTAC TGTTCTCTGATTCCAAGTGCAAATCAAGCTAGACCACTCAGCAGCTATGATTCATTGATCATCCATAAACGAAGAGCTTCAAGATTTTCTCATGGAATTT CCATCAAGGCCAAGGCCATAAAAGATGAAATGGATGGGGAAACAAGTGGGTCTTCAGGACGTAGCTGGGATCCTGGGTTGGAAATCGAGGTCCCTTTTGA GCAGAGACCGGTGAATGAGTACTCATCTCTGAAGGATGGAATATTGTATTCATGGGGTGAACTGGGTCCAGGGTCCTTCTTCCTTCGCCTTGGAGGCCTC TGGTTGTCAGTGTTCATAGTTCTTGGAGTGCCAATTGCAGCTGCAAGCTTTAATCCTTCTAGGGAGCCTCTAAGATTTGCACTAGCTGCTGGAACAGGAA CTCTCTTCATTGTCTCTTTGATTGTTTTGAGGATTTATCTGGGTTGGAGTTATGTTGGTGATAGACTTCTATCAGCGGTCATTCCTTATGAAGAAAGTGG CTGGTATGACGGACAGATGTGGGTCAAGCCACCTGAGGTTAGCCTCTCACCTCTTTCCTTTGCCAAGAGATAACAGAAAAGTACCTCTTAAGAAGTAACA CTTTCATAAAACTATATATATTCAAGGTGGCAAATTCAATGAGCCGAAGGAAAGATTATGTTGCAAACCAACAAAATCATACCCCTATTAGAGGCTGGAT ATTAGAAAGTATACACTATTGAATATAAAATCAACCTTTTTAGATGTTGCTTGCAATTTGGCACTTGGTACCAAGACAAAATCAACTACTGGCCTTTTTA GCAAAAGACGGAACAATAGAAAACATTAAATTTAATTTAGAGATAAAGGTGAACAAATAATAGGTTAGCCACTGTTGAATTTCAAATTGTAGAAGATACT GGTTCATTGAGCAATAAGCAATCTGTTCAAAATTATTGCATACATAGGATATGGAATAAGGGCGGACTAGTGTATAAGACTCCCATCTAGTGGGATTCGG AAAGGGTAGATGTACGTAGGTTATGGAATAAATATAGCTAAAATGTCCTAACAATAACTACTAAAGGAAATAGTGACATGCTTTGTTTATCTCATTTCAG GCACTATAAACTGAAAACTTGGCTTTCTTTGCAGATCCTAGCTCGTGATAGATTGTTGGGCTCTTACAAGGTCAAGCCAGTTGTTAAACTTCTGAAGCAA ACTCTTGTCGGTACAGGAGCATTACTTGTTACTGGAGTTATGCTATTTATTTTTGCTACACCTGTGGAGAACTTTTTTCGAACCACCTTTACCACAGTAG AAAATAAATCTACCACTCAAACTCCAAAAGTTAACACAAAGTTCAACCTAAGGAAGGAGGAGTTGCTTCAATTGCCTGCAGACGTGATATCTAATGACGA TCTAGCGGCTGCTGCTGCTGAGGCTGCCGACGGAAGACCAGTCTATTGCAGGGATAGGTTTCATCGAGTATTAGCAGGAGGCCAGTACTGCAAATGGGAA GATCTGCTCGAGTAAAGGGCGAAAGAGACATGTGTAATGAATTTCATTTTGTTAAAGCAGATCATGATTTGTAGTAAGTGACTCTGGCCAAAAAAATTAT CCTATTAGTTAAAAGACCATTTAAGGGTTTCATAGCAAAAGGATACAGCCTGCAATAGATAGTGAAGATAAAATAAGGTTGCAGTAAGCAATAACTTTAT CATATGGTACGAGACATCATATACTAGTAGCATATATATTCAGAGGGAAAGACAACATGGGTACCTAATTGAAGACTTTAAGATAAAAATGAGAACAAGA AAACAGGCTTAAATAGATATATAGACATGTGAAACTGCTGCATGCATATGTGGTCTATGCAGGCCTGAATAGATTGTATTTGATATACCATGACACAAGT TATGGTAACCAAGTAAGTAGATTGCACAAATTTGTTCAGCTCTGATTGCACAAGTTATGGGTTGATCAAAAGTTGAATTTGTTGTAACCAAATAAACAAA ACTAACAAAGGAGATGCTATTGTGTTGATAAAATAAATCTTCTTCTCCAACAAAACCTAATGATAACAGAGCACACAGCATCAGAGCATATGCATCAATG GAAATGAACGTGATGCAGAAAAGGATTTGTTGTGCTAACTCAAACATCAATAAGATTACAGGGACATGATCTAATGCATCTACACTAAAACTGAAACGTC CTCACCCACTTGATACTAATGCATATCTTCTCTAGCATATTTTATCATAA
• Tissue: flowers
• Gene name: LI_gene_48764;
• Additional information: details;

Expression of Ll_transcript_20839

FPKM

• FPAB: 27
• FPNAB: 5.3
• LF1: 5.9
• LF2: 6.2
• LF3: 5.2
• LF4: 7.3
• UF1: 6.7
• UF2: 6.3
• UF3: 8.2
• UF4: 11.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_20839

• Blastp: Uncharacterized protein ycf36 from Porphyra with 42.98% of identity
• Blastx: Uncharacterized protein ycf36 from Porphyra with 44.07% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421174.1)
• Pfam: Protein of unknown function (DUF1230) (PF06799.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;