Ll_transcript_20579

• Id Trinity: FTRINITY_DN55134_c0_g1_i4
• Name Transcript: Ll_transcript_20579
• Sequence: AGTCTGAGCAAATTAAGTTTCACACGATGAGCATACTGAGGCCTGATGACAATTTGGCACATATAGAAGACATTGTATTTTTATACAGGGCTGCACTGTG CACTGCTTGCAGGTGTGCCAGACAGAATTATAGAAAGAGCAGCATTTGTGCTGGACGCAGTTGCGAATAACCGGTATGTTGAGCGATTAAGCAATGATAA CATCTCAGCTCAGGATCAACAATACAAGGATGCCACTGAGAAGTTGTTGAAATTCGACATTGACAAAGGCGACCTAAAACTATTTTTTGAGGATATATTT TCTCTAGTTCCTAATTGCTAACTTCAGGCAGCTACTAGCTGTTTCAATGTAATAGGAGATGTGTAAGTTGAAGGACCATTGAAAATTCTGTCAACAAAGA TCCGAGAAGCAGCCTCGGTCGGATGGAATTGATCCCAGAAGATGTGATCTTGTCTATTGGGACAAAGGCTAGACACTGGCAGGCAAGGAGCCTTGGCCTT CAGCTCACCAAGTCCACAACAAGCAG
• Tissue: flowers
• Gene name: LI_gene_48840;
• Additional information: -

Expression of Ll_transcript_20579

FPKM

• FPAB: 0.1
• FPNAB: 0.5
• LF1: 0.3
• LF2: 0.4
• LF3: 0.4
• LF4: 0
• UF1: 0.3
• UF2: 0.2
• UF3: 0.4
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_20579

• Blastp: -
• Blastx: DNA mismatch repair protein MSH5 from Arabidopsis with 56.96% of identity
• Eggnog: that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)(COG0249)
• Kegg: Link to kegg annotations (AT3G20475)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435603.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;