| Id Trinity | FTRINITY_DN55135_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_19888 |
| Sequence | ATTCTATACTTTTTCTATGTGTAGGCTTAAGCATTGGAGTGTAGAGTCTTCCCTTCTTCCTTTGTAACAAAACTCTTTCTTCAATATACACACAAATACT TCAAACTCAGATGACAAAATCATCAAAATCTTGTGTTAAATTCTCATTATATTCTCTTCTAATCTTCATTCTTTTACTGAACCATGCAAACTCTTATTCT GATATATATAAGGAAGAACATATAGTCCTAATGAATATAAAACAGTACCTACAAAACCCACCATATCTTAGTCATTGGACCCTATCAAACTCTTCTCATT GTTCTTGGCCAGAACTAAACTGCACCAATGATTCTGTTACTGGTTTATCTCTTGTTGAGTCTAATATCAACCAAACAATACCATCTTTCATATGTGACCT CAAAAATCTCACACATGTTGATTTCAGTATAAATGATATTCCTGGAGAGTTTCCAAGGTATCTTTATAATTGTTCCAAGCTTGAATATTTGGACTTGTCT ATGAATAACTTGTATGGCAAGGTTCCTGAAGATATTGAAAGTTTGTCTAGTTTGCAGTATCTTAACCTTGGTTCAACCAATTTTTGTGGTGATATTCCTG TGAGTATTGGAAGGTTAAAGGGTCTTAGAGTACTTCAACTTCAATATTGTTTGTTCAATGGAACTTATCCTGATGAAATTGGCAACTTGTCCAATCTTGA AACCTTGGATTTGTCGTCTAACTCCGAGCTCCCTCAGTCGAGTTTGCCATCGAGTTGGACTAAGTTGAGCAAATTGAAGGTGTTTTATATGTATGGCTGC AACTTGGTTGGGGAAATCCCTGAAACCATTGGAGAAATGGTGGCATTGGAGAAGTTGGATTTGTCAGAAAACAAATTAACTGGGCCGATTCCAAAAGGTT TGTTATTGCTGAAGAATCTGACCAATCTATATCTTCAACACAACAGTCTATCTGGCGAGATACCTGATGCGATTGAAGCGTTAAACTTGACAGCTATCGA TCTCACGAGGAATGATCTATCAGGGAGAATACCTGATGACTTTGGAATGCTCACAAAGTTAACAGGCTTGTGCTTGTCTGGAAATAAGTTGTCAGGGGAG ATACCAGAAAATGTAGGCCGTTTTCCATATCTCAAGGATTTTCGCGTCTTTTTCAACAACTTATCAGGTACTCTTTCTCCTGATTTTGGCCGTTTCTCGA AGCTAGGATCGTTCCACATTGCTTCCAATAAATTTTCAGGAAGTATACCTGAAAATTTATGCTATCATGGCGAGTTACGTAATTTAACTGTTTATGACAA TAACCTCAGTGGAGAGTTGCCAGAATCACTAGGGAATTGTAGTAGCCTGCTGGAGTTGAAAATTTTCAATAATCAGTTTTCTGGTAAAATTCCTAGTGGT CTTTGGACATCTTTCAATTTGTTAACTTTCATGGTAAGCCACAACAACTTCACTGGTGTGCTTCCCGAAATACTGTCTTCAAATATTTCGCTCTTTCAGA TAAGTTCCAATCAGTTTTCTGGTAGAATTCCAACCGGAGTATCATCCTGGACTAATGTGGTAGTGTTTGATGCCAGTAAGAACTACTTGAATGGAAGTAT TCCGCAAGAGCTAACAACTCTTCCCAGATTAACCACTCTTTTGCTTGACCAGAACCAGCTCATAGGGCCACTTCCATCAAAAATAATATCATGGGAGTCC TTAGTAACTTTAAATTTAAGCCAAAATCAACTCTCTGGACAAATTCCTGATGCAATTGGTCAGTTACCTGTCCTTAGTCAGCTTGACTTGTCAGAAAACC AATTCTCTGGCCAAATACCTTCAAGACTTCCTAAACTCACCAATCTCAATCTATCTTCCAATAACTTGACAGGGCAGATTCCAAGCGAGTTTGAAAATTC TGCATTTGAAAGTAGCTTTTTGGACAATCCCGGCCTTTGTTCTGACACACAAGCACTTAATCTTACCTTGTGTAATTCTGGAACTACTGAAAGGTCAAGC AAGGACTCATCTAGGTCTCCAGCTTTGATTATAAGCCTTGCGGTTGTAACCTTCTTACTCGCTTGTTTGATGTCATTCTTGATTATCAGACGTTGCAGAA AGAGAAAGCAAGGACTTGATAACTCATGGATTCTCATCTCCTTTCAGAGGCTGAATTTCACTGAATCAAACATAGTGTCTTCAATGACAGAACATAATAT TATTGGAAGTGGTGGATATGGCACAGTATACCGTGTCCCTATCAATGATTTAGGCTATGTTGCTGTGAAAAAGATTTCGAATAACAAAAGGTTGGACAAG AAGCTTGAGAACTCCTTTCATGCTGAAGTTAAAGTATTGAGCAACATTCGTCATAACAACATTGTGAAGTTGTTGTGCTGTATCTCGAACGATAATTCTA TGCTGCTGGTTTATGAGTATCTCGAAAACAGTAGCCTAGATAGGTGGCTGCACACGAAGAGAAACTCGTCAGTTGTGTCAGGTTCAGTCCATCATTTTGT CCTTGATTGGCCTAAGAGATTCAAAATAGCTGTAGGAATTGCTCAAGGTTTGAGCTACATGCACCATGATTGTTCACCACCTATTGTTCATAGAGATGTG AAAGCAAGCAACATCATTTTGGATTCTCAACTCAATGCAAAAGTTGCTGATTTCGGTCTGGCTAGGATGTTGATAAAGCTAGGGGAACTTGAGACCATGT CAAGTGTGGTTGGATCATTTGGATATATAGCTCCAGAATATGTACAAACTAGTAGAGTGAGTGAAAAGATTGATGTGTTTAGCTTTGGAGTTATCCTATT GGAACTGGCAACTGGTAAAGAAGCTAACAAAGGAGATGAGCACTCATCTCTTGCAGAATGGGCATGGCGCCAAGTTCAGTTAGGAAGCAACATAGAAGAG CTGCTAGACAAAGAAATCATGGAAAATAGTTACTTGGGTGAAATGTGTAATGTTTTCAAACTTGGTCTCATGTGTACTTCAACACTGCCAGATAGTAGAC CTTCCATGAAGGAGGCCTTACAAGTATTGCTCATGTGTGGAGAATCATTGGCTCATAAAGAAAGGAATGTTTGTCACTATGATGTTGTTCCTCTTCTTGG AAATTCAAAAGGGGAGTGTAGGTTGGATGTTGATAATGATAGCTAGATTGATTGGAAAATGATCACCTTACAACCCTTTTTCCACCTACTTTATAAGCAT TGATCATCTGCACAATGTTATTTAGAGGAAAAATTATTGAATTATAAAGTAGGTGTAAAAAAAGGTTGTGGTAGAGGATGTACAAATATCAATGCTCATA TATATTGGTTCAAGTAGTGTCATGTTGGTATAGAAGTGTGACTAATGAACTTGTTTTGAAGGTTAGTGACTAATTCAATAATTTAGTGAAATACAGAGAT ATATAGGATAGCAGATATAGAGTATAGGTAAGGTAGAGCTGGATGGAAAATGGCATAGACCAGAAGTACTTCATAACATTTGTAAATACATTTTTATTTA TAAACTTTAGATCATTTAAATATCATGTTTTGTCTTTACTGTTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48843; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_19888
| Blastp | Receptor-like protein kinase HSL1 from Arabidopsis with 37.9% of identity |
|---|---|
| Blastx | Receptor-like protein kinase HSL1 from Arabidopsis with 38.55% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT1G28440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458128.1) |
| Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |