| Id Trinity | FTRINITY_DN55137_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_21782 |
| Sequence | ATTTTTCTCCCTCTATCCCATCTTCTTTTTCACTCTCAGTTCCTTTTGCTTCTCTATTCTTCCTGGGTTCGTCTTCTCCTTCGATTAGGGTTTTCTCCGA CTTCTCCTTCGATTAGGTTTCTCACACTCTCGGTTTCGGTTTTGAGGCCATGTCTTCACTTTCGATTTTGATTCCAGATTTAACATCCTTTCTCCATCGA TTCCAGCCTTACCGAACTCGTTTTCGGTTTCGTTTTAAGGCCACTTCCTCGAATATGGTTAACGTTCAACCCTCTCCTTGCTACGGTGGTAGCAACATAG TTATGAAGACCACCAACGGAGGGTGGTCACTTACGGTGATCTGGTCCCAATCGTGGATGGCTCGTGGCTGGAGCAATATCGCCTATGGCAGCATCTTAAT ATCGAAGGAAACTTAAATGGATTCGTCTTTTGAAGTGATGAGAAGTCAATGCCAAAAAATGCCAGATGTTCTGCTAAAAGTGGGTCCAATACACTATCAT CCTCTGGATAGGAGTAGGCATCTGCTGAGCATTTTAATTATACTGAAAATTTACGGAACTGGAATGGGTATGTGACCGCTGTTTCTTTGCAGACAGATAA TTATGGTTTCATAGTTGTAGTAAGGAATAAACTTCTGTGACAAGTTTTTAAAGCCTAAGGATTTAGGTTCTGAACACCCCTTTGGATTTCATGGATATCT CATATTGTTTTTATATTTTAAAATACATTAAGATCAACTTGCTTGTACCACAGTTTCCATGTTTCATTATCATCTTGCAGTTGATGCTAGTGGACTTAAT GTTCTTTGCATATGGGATGTGCTTTTAAATATTTCTACAAGTATCATATTTTTACCTTCTTATAGGTTAAGAAAATTCCGAGGATATTTTCGTCAGGAGA TAACTATCTGAAGTCATTTATTTTTCCACTTATTGAGGAAACTCTTACAGATTTGTGCTCCAATATTAAGATGGTGTCAGAAGCTCCAATATGCCAAATA ACTGACATTGATTTTGCTCAAGATTACAATCCTCCAAACAATTTGTTATACAAGATTGAAATGAACACAGTAGTGGAAAGTGATAAAAAAGGGGACGCTT ATGAGCCTGAGCCGGGAGATCTCGTTGCTTTGACTAATACCAGGCCAACATGCATTGGTGATTTGAAGAAGCCTGGAAATTCCTATTTCATTTCTTTGAT TAAAAGGGTAAGACAGGATATAGAGAATAAAAATGTTTACAAGGTTCAAATACTAGCCTCAAAGCCTATAAAATTTGAAGCCTACTTGCGCAAGGATGAC AGGTATGTAGATGCTTTTGCTGTCTACGTTGGTAACATCACAACAAATGTGCGTATATGGAATGCACTGAATACAGAGCCAGATGGTCCAGGCATGTATA TCATCAAGAAACTTCTCCAACCTAATTCTGAAGTTGGTGAAAACTGTGCTCAATGTTTCTCCAGTGAAAGGTACAATATTGATGTATCAATTCTTGGTGC TATAATCCGTTCATTTGATTTGAACAAATCTCAAGAAGACAGAATTGTAAGCTGTTTAGCTGCAAGGGAATGTTCTCACAAAAATACTGTGAAATTGATT TGGGGCCCTCCAGGGACAGGGAAAACAAAAACAGTTGGCTCGCTATTATTTTGCCTCTTCAAAAGGAAATGCCAAACACTTACTTGTGCCCCAACTAATG TGGCAGTGCTGGAAGTTATAACTCGGTTTCTTAGGCTAGTAATGGAGTCCCTAGATTATCACACTTATGGTCTTGGAGACATAATATTATTCGGTAATAA AAAGCGGATGAGGATTGACACTCGTGATGATCTTCTAGATGTATTTCTTGATTACCGTGCAAATATTCTTGCCAAGTGCTTTGCACCTTTATCTGGTTGG AAACATAATTTGGAGCTGATGATATGTTTACTTGAAAATCCAGGAGAACAATATCATAAGTATTTAAAAGATGAGGAAAAGAGGGATTATATGACAGATG GTGATGATTGTTTGAAAGAAGAGATGGAACAACATTCAATTTCAAGTCCACAAACAAATGAAGAAAAATTGGATATCAAATCCCAGGATCCGAAAAATGG CAAGCAAAATGACTGGAAGAGTATAGTTAATAAAACTTTAAGAGAAAGCAGGTTGTGTTTTAAGGAGGAAAACAGAAATAAATATCATAAACAAGCGAAT AGGGGTTTTCCTTTTCAAGAGAAGAAAATAGAAACGTTGACATTTCTTGAGTTTGTGAAGAAAAAAATGAATTCCATCAGGACACAGATGAGGAAATATG TTGTGGATATGTGTACTCATTTGCCAACTTCTTCAATTTCGTTAAGAGTCTTGAAAAACTTATTTGAATGTCTTGATTGGCTGAAAGATCTTTCGATGGT GCTATTAGACAATTCCATTACTGAAGACGGATTTCAACTCGCCCTTAATACATCTGATGTTGATGAAAGTAGACTTAGTTGCTATACATGGCAGTCTAAG CTGTGTACAACCAGGAAAAAATGCCTTAAAATGCTGAAATCAATTCAAGATGTGTTGATTCTTCCTAAATTTTTTGATGAATCTTCAATTAAAAATTTTT GTCTTAAAAGAGCTCGCATGATATTTTGTACTGCTTCGAGCTCTGCTAGATTGCATGCAGAAGGACTTGATAGACTAGAAATATTAGTTGTTGATGAGGC TGCCCAGCTCAAAGAATGTGAGTCAAACATACCTTTACAACTTCCGGGTCTTCGCCATGTTGTACTTGTTGGAGATGAGAAACAGTTGCCTGCACTAGTC AAAAGTGAGATTTCTGAGAAGGCAGGAATCGGAAGAAGTTTGTTTGAAAGGCTGGTTATTTTGGGTCATGATAAACAGCTTCTCAATGTTCAATATAGAA TGCATCCATCCATAAGCTCATTTCCAAATATGGAGTTCTATGACAAACAGATTTTGGATTCTCCAAGTGTCAAAAAAGGAAGCTATGAGAAGCATTTTCT ACATGGGGATATGTTTAAGTCCTACTCATTTATAAATGTCGATTTTGGACAAGATGAACTTAATGAAGGGACTAGCCGAAAAAATATGGTGGAAGTAGCT GTGGTATCAAAGATTGTTCTTGACCTTTTTAAAGAATCAGCTTCCAGAAAACAGTCTGTTAGTGTTGGTGTTATATCACCATATAAAGCTCAAGTTTTTG CCATCCAAGGTGCACTTGGAAAAATGTTCGATGGTGATGCTGGTAATGACTTTTCCGTGAAGGTTTCCACTGTCGATGGTTTCCAAGGTGGCGAAGAGGA TGTGATAATAATATCCACCGTCAGATATAATAATATGGGATCAGTCGGATTTATTTCTAATTGTCAGAGAACTAATGTTGCTGTAACAAGAGCAAGGTAT TGCCTTTGGATAGTTGGGAATGGTGAAACCTTGATGAATAGTGGCTCTGTTTGGGAGAGATTAGTCCTTGACGCTAAGGCTCGAGGGTGTTATCATAATG CTAATGAGAATGAGAGGTTGTCTCGTGCTATTACAACTTCCATGATCGAGCTCGACCAAGTTGTCCATTTATTGAATATGAATTCTCCGCTTTTTAGAAA AGCAAGGTGGAAGGTTTACTTCAATCCGGGTTTTCTCGACTCTATGGCAAAAATTAAAAGCACCGACGCTTGCAAGAAAATATGTTTCCTGCTGGCTCAA CTTTCAAGTGGTTGGCGTTACCCTCACCAGGAGATAAATCTTGGAGTTGAAGATAATACTTGTTCCCAATTGTGGAAGGTGTATAAGGTCACTGAGTTGC TTTGTCTTGCATGGACCATAGACATTCTTGAGGAGAACTCAAATTATGTTCCTGTTTTGAAGATTTGGGATGTTTTGCCATTTTCTGAATTATGGAAGGT GAAAAGGGATATTGACATTTCATACAGGAATAATTCTAATGATATTCTGAGAAGCTTGGAATTCAGATGTTCTGATGGAAATTTTGAGGTTCCAGTGATG TGGCCAGCTAGTTCAAATTATACAACCAATAATAATCTGCCACAACCTGACCCTATGCAGCTTCTATGTAACCAATTTGCTATGCTAAGTCTGATGGATG TTTAAATTAGAATCAATAGTGCATTACTCTCACCTCCTTCAATTTTGTTTATAATACACTAACATTTCCCCTGCTTTGGATAAATATAAGAAAAATTAAG AGGGGTATATGTAGGTTTTTCAAGGTGTACTTTTGCAGTTTCAGGGAGATTTGCGTATGTTTTAGATATAGAGAATACTGCTGTAATTCAAGTAAAATAC AAGGGAGATCAGAAGTTGCAGGTTAGTTACTATGTTGGGATTTCGTTGTCATGGACTTGCATTTTTGTCCACTTTAGGACTCCGTTTACTTTTTGGGATC GGAGTTGAGAAATTACATTTTATATTATTCATAATCAATGTAAATATAAAATTGCATACTTATACTTAACTCTAATATAAATTGAATGATTCTCTCAAAA AA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48861; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21782
| Blastp | Probable helicase MAGATAMA 3 from Arabidopsis with 36.93% of identity |
|---|---|
| Blastx | Probable helicase MAGATAMA 3 from Arabidopsis with 36.93% of identity |
| Eggnog | Helicase(COG1112) |
| Kegg | Link to kegg annotations (AT4G15570) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419355.1) |
| Pfam | AAA domain (PF13086.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |