Ll_transcript_20340

Id TrinityFTRINITY_DN55142_c1_g1_i8
Name TranscriptLl_transcript_20340
SequenceATCCAAACAGCAGCGACTTGCGTTTATGTTAACAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAAAACTGCGAACTCTGGTTCTGTGCGAACTC TAGGGATTTCATTCATTCCATATTTCAATTCGAAATTCCTATTCCAATCCCTAATTTCATTCTGAATGGATAAGGAAGATGATGAAGCTCCTACTCTACT CTCTCATGACCTTTCAAACACCGAAGAAGAAGGAGAGAACGTGATCGCAGATGAGTTACCTCAACACGGAGAAAACGCTGTGGATGATGTAGGTCTGGGA ATTGTTGACGTGGCATCAGCGAAGACCGAAGCTGTTGCGGTTGTGTCGGAGGAGAGAGAGGTTTCCGATTCGGTTACTGAGGGCCAAGGAATCGAGGATA AAGTTGCTTCAGCTGTTGACGATGCTGTCAATGCCATTCAGAATCCGAGAGTGGACGAGGGAACTGAGGTTGATGACGTGGAGAGTGGAAAGGAAGAAGA AGAAGAAGAAGAAGAAGAGGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGGAGAAGATGATGCTGATGTGGGATATGATGATAAGGCGGATGAAGCGGTC GACGAAACCGGTCGAACTCAGGGAACTGATGATGTAATCAGAGATGAAAAGGAGGCAGTGAATGAAGAAGAAGAGGAAGAAGAAGAAGAGAAGGAGGTGA GTGTTCATGAGGGTGATAACGATGGTCTCGGTGATGATACGACACAAGAGACGGACACTGCTGCTTTGATGGAAGAAGGAGATGGAGAAGAAGCTGGTGC TGGTGATGGTGATGGTGTGGGTCAAGATATAGAGGAAGAAGAAGAACAAGGAGGTGGTGGTGAAGGTGATGGTATGGAAGAAGAAGATGAGGTGAGAGAG GAGCAGAGTGAAAGTGTGAGTGGTGGGAAGAGAAAGCGCGGGCCTGCCAAGAATTCTAAGACAACAAGGAGAGTTGCTTCCAAGAAAAAGATGGAAGAGG ACGTTTGTTTCATTTGCTTTGATGGCGGTGCCATTGTGCCTTGCAACCGCAGGGGATGTCCTAAGGCTTACCATCCTTCTTGTGTTAATCGTGATGAAGC CTTTTTTCGAACCAAGGGAAAATGGAATTGTGGTTGGCATCTTTGCAGTAACTGTGAGAAGAATGCTCACTATATGTGCTATACATGTACGTTCTCTTTG TGCAAGGGATGCATCAAAGACGCTATTATCTTTTGTGTTAGGGGAAACAAGGGCTTTTGCGAAACATGCATGACAACTGTGATGTTGATTGAACAGAATG AGCAGGGAATCACGGGACAAGTGGATTTTGATGATAAAAACAGCTGGGAGTATCTCTTCAAGGACTACTACATAGATCTAAAAGAAAAGCTATCTCTAAC ATTTGATGAACTTACTGAAGCTAAAAACCCTTGGAAGGGATCTGATATGGCTGCTTCTAAAGATGAATCACCAGATGAGCTTTATGATGCAAACAATGAT AGAGGATCTGACTCAGATAACTCCTACGAGAATATAGGTTCTAGTCGTTCTAAAAGAAGAAAGGGCAAGAAACGGGCAAAATCTCGTTCCAAAGAAGGGA ATTCATATGCAGCAACAGTGCGTGCTGCTAATGTGACATCTGCAGATGACCGATCTGAATGGTCTTCAAAAGAGCTTTTGGAGTTTGTTATGCACATGAG AAATGGAGACACATCTATTTTATCTCAGTTTGATGTTCAAGCCCTTTTGCTAGAGTACATCAAAAGAAATAAGCTTCGGGACCCTCGCCGAAAAAGTCAA ATCATTTGTGATGCAAGGCTTCAAAATTTGTTTGGTAAACCAAGAGTGGGACATTTTGAAATGTTAAAGCTTCTTGAATCTCATTTCCTTTTAAAAGAGG ACTACCAGGGCGAAGATCTGCAGGGGAGTGTCGTTGATACTGAAGCTACTCATTTAGATGGTGATGGAAACACCGATTCATATCTCAAAGCTGGCAAAGA TAAGAGACGTAAAACTCGTAAAAAGGGTGATGAGAGAGGACTCCATTCTAATGTTGATGATTATGCAGCTATTGATAATCACAATATCAATTTAATTTAT CTAAGACGTAATTTGGTTGAAGATCTACTTGAAGATACTGAGAATTTTCATGATAAAGCTGTTGGTGCTTTTGTGAGAATAAGAATTTCTGGTAGTGGTC AGAAGCAAGATTTGTACAGGCTGGTTCAGGTTGCAGGTACGAGCAAAGCAGCAGAGCCATATAAAGTGGGTAAAAGGATGACAGATATCTTGCTAGAGAT TTTAAATTTAAACAAGACAGAGATTGTATCAATTGATATTATCTCAAACCAGGAGTTCACAGAGGATGAATGCAAACGTCTTCGCCAAAGCATAAAGTGT GGACTTATAAATCGACTGACTGTGGGCAATATTCAGGACAAGGCATTTGCACTTCAGGCAGTTAGAGTAAAAGATTGGCTAGAGACAGAGATAGTGCGGC TAAGTCATCTTCGTGATAGAGCTAGTGAGAAAGGACGGAGAAAAGAGCTCAGAGAATGTGTAGAGAAATTGCAGCTTTTGAAAACACCTGAAGAGCGTCA ACGAAGATTGGAGGAAGTTCCAGAAATACATGTGGATCCCAAAATGGATCCAAGTTATGAGTCTGAAGAAGATGAAGATGAAATGAATGATAAAGGACAA GGTTGTAATAATATAGTGTGAACTTAAAACCATGTATTGCTTCTTTTTCTAATATTTGGTGGTGTTTTCCTTTCTATGCCTGCAGAAAGCTATATGAGGC CTAGAGGATCTGCTGCATTTGGAAGGAAGGCCAGGGAAATTGTTTCTCCTAGAAGTGGTTCAAGTGATTCTTGGAGTGGAACAAGGAATTATTCTAGTGC TAATAGGGAACTCAGCAGAAATTTGTCTAATAAGGGGTTTTCAATTAAAGGTGATGATGTTTTTAATTCTAGCGAGGCATTAAATGATGCTCAATTGCGA GATCGGGAATCGCAACTATCTAATAGCAGGGAGAGGCAAAGACTATCTTCAAGCTCTGAAATTGGTGCGAAAAATGCCCAGCCACTGGTAGGAACCGAGT CTTTCTCTAATGCTGTGTTAGAACCTTCTGCAGCACCATCTTCTGCTGGAATAGCTTCCCCCACCGTGAAAATTAACGAAAGTGAAAAGATGTGGCACTA TCAGGATCCGTCTGGAAAAGTTCAGGGACCATTTTCCATGGTTCAGCTTCGAAAATGGAATAACACTGGTTACTTTCCTGCTGATTTGAGGATTTGGAGA ACCACTGAGAAGCAAGATGAGTCCATGCCCTTAAAAGATGCCTTAGAAGGAAAGTTTTCTAAGGAATCACCAGTGGTGGATAAAACTCTTCCTAAGGCTC AAATGGTGCATGATTTACATAACTCGTCCTCGTACCTTGGGAAGTCTCATTTGGCTGCACAACAAGGCATAATAGAAGCTCAAGTTGGAGCAAGACCAAC ATTTGATCAAAACAGTGGATCTTGGAATTCTTCACATAGTTCTCTGGGTTCTCTTGGCCAAACTGCAGGAGGAAGTAGACCTTCTCCATTGGTAGTCGAG GTCCCCAAGACTACTTCAGATGGATGGGGTTCTAATGTTGGTGTTCGCAATGAATCAACAAATCTTCCTTCACCCACTCCTCAAACTCCTTCAGTTGGGA CTATGGTGCAGGGTTTTGAAAATAATTGGTCACCAACACCCATCCTAGGAAACCCAAACCTGAGCGGCCCTGGTGCTTTGCAGATGCAAAATGCTGAAAA TGGTTTGAGTTCACGAACTGTGGTTATGTCAGCTTCTACTACTCAAGTACATCCTCAAGCAACCGTGCTGACACCTGGTCTGCAAAACCAGGTTGTTAGT AGCCATAACTCTCATGCTGGAGCTCAAGGGTGGGGTTCTGGTTTGGTTTCAAAGGTAGAACCACAGGCCTTGGGAGCTACTCCATCTCAAAGGGTAGAAC CTAATAATCATGCTACCATGCCTGTCCAGAACTCTGCCTCATTTATCAATGGAAATCCAACTGGGAGTTTCCCTGCACAAAGCTATCCGGGCCAATCAAA CATTTCAGCTCCAGCTCCACCTAATAATATGCCGTGGAACATGGGTGTTGTACAAAATCAAAATGCTACTGCCTGGGGTGGCATGCCAGGAAATCAGAAT ACCGGTTGGGGTGGGGGGGCTGTTCCTGCCAATGTGAATATGAACTGGATGCCTGCGCAGGTGCCAGCACCTGGAAATGCTAATCCAGGATGGGCTGCTG CTCCTAGTCAAGGGCAACCACCTCCTGTAAATGCAGCTGGTTGGGTTGCACCTGGTCAAGGACGGCCACATGTAAATTCCAACATGGGTTGGAGTCAAGG GCACACACCGGGAAATGCCAATCCTGGCTGGCCTGCATCGGTCGGGAATCAAGGTACATGGGGAGGAGGTGAGCATCATCATAATGGAGAGAGGCTCACC AACCAGCGTGATCGTGGTACCCATGGTGGCAGAGATTCTGGTTATGGAGGTAAACCTTGGAGCAGGCAGACATCATTTAACAGCGGAGGAAGCAGAGGAG GAGGTTCATCCAGGCCTCCTTTCGGGGGACAGAGAGTTGCATGCAAGTTCAATGAAAGTGGACGTTGCAAGAAAGGGGACTCATGTGATTTTATGCACAA TTAAGAATCGTAGGGGATTAGCGTTAGAGAAGAAGAATATGTGTACACTAGTAATTTTCACATTAACATTGTACTATCTCAGCATGCTTCATGTATTTAG AACACCTGCGTGGTTGCATCTCATTTATTTTTCTGGCCATGTACTATTATTATCCACTTACTTTGAGTTGACTTAGTTACACAAGTCGAGGTGGCTTTCT TAGAATAATAATGACTCAACATCGTCCAAGTTAATAGTGTTTTTTGCTTTCTTGTTTTAACAAAAAAATGAATGTCTCGGGTCAAAACATGTCAGACAGC CTATCAGATGCCTATTATCTGACTTATAACAAGTTAGGTCAGGTCAAGCTTAGTACAACCTGTTATATCTTACTTTCTCTATGCTTTTTTAAATCTATGC GTTTTCAAGTTTCTAATTAGTCTTCTAACTGATTTGTATTAATTAAAACTTG BLAST
Tissueflowers
Gene nameLI_gene_48906; 
Additional informationdetails; 

Expression of Ll_transcript_20340

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_20340
BlastpZinc finger CCCH domain-containing protein 19 from Arabidopsis with 61.44% of identity
BlastxZinc finger CCCH domain-containing protein 19 from Arabidopsis with 45.27% of identity
EggnogDNA binding nucleic acid binding protein binding zinc ion binding(ENOG4111KSI)
KeggLink to kegg annotations (AT2G16485)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438191.1)
PfamSWIB/MDM2 domain (PF02201.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;