| Id Trinity | FTRINITY_DN55145_c0_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_20000 |
| Sequence | TGGTTAGAGCAGCTACAGAAGTTAGTTAAAAATTTCCTTCTTTGCTATATATATATAAATAAAATACAGTATAAGAGTGAGTAGTTTGAATTTAAAGAAA AAAAGAAGGGAAGAAGAGGAATGGAAATGAAGAAGAATAAACATTCGGGTCGGGTCATAGCTGGACCCACGAACCCGATGGTGACGCCTCTGCTCACGGA TCTCTATCAATTCACCATGGCTTACGCTTACTGGAAAGCTGGCAAGCATCAACAACGTGCTGTGTTTGATTTATATTTTCGGAAGAATCCCTTTCGCGGG GAATATACTATATTTGCTGGTTTGGAAGAATGTGTAAGGTTCATCTCTAATTACAAGCTTTCCGACGAAGAAATTGATTTTATCAGAAGTAGTTTATCTA TTTCATGTGAGGATGGCTTCTTTGACTATCTTAGAGGAATTGACTGCTCTGATGTCGAGGTGTATGCTATTCCTGAGGGATCAGTTGTTTTTCCTAAGAT ACCCTTGATGAGAATTGAAGGGCCAGTTGCAGTTGTTCAATTGCTGGAAACCCCTTTTGCAAATCTAATTAACTATGCATCATTAGTTTCTACTAATGCT GCAAGGCATCGTTTTGTTGCTGGAAAATCAAAAACACTTCTTGAATTTGGTTTGAGAAGGGCTCAGGGGCCTGATGGGGGAGTGGGAGCATCGAAGTACT GCTATATTGGAGGATTTGATGCAACGAGGTATATTCTATTGAACAACTTCAATCTTTGTGTTTGGCATAAGAATCGGGAGGGAATGTTCACCATATTATG TGCATACCCAAAAGTTATCGTGCTTGAGTCATATCTTGCCCATGTCCATCGTAAGTCATATGCATTAACACATCATATGGCAATAATTAACTGAAGATTG GTTTTAAGAGAGCAATACTAGAAGTAAGGTGCAAAATGAATGCTGGGATGAAGGCTAAATTTCAAACACTGACTGTCAACTTGTCTTGATTATTATATCA GCATTTCTATCGCGACTCAATTATCAAATTATGATGACATCCTTCTTTACTATTTTGTTTTTTGACATCCTTCTTTACCATTTTGTTTTGATTTAGTGAT TTATTTTATTTCCAACCTTGGCATTTCTATAATGTGGCTTTTTCATATGGATTTCCAATAGCAATGTTGCAGCAGGAAGGTTATTCGGGATTCCCCTTCG TGGAACTCATTCACATGCCTTTGTTAGCTCATATATGGTACGTGAAACTTGAAAGGGCAAATTTTCTGATAATTTTTTTCCTTTCAATGTGTCTGGAGGC TCAAAATTACATTTGATTGTTTCAAGTTACGGTGTCTGTATGAAAAGGATTTTATAAATGTTGTATAAGGATTAATAACTAAAACCAGCACAATTAATCA AGACATTTATTAACCTCTTATTACTAGTGGTAATACCTATTTTGAGTCATCAATCCAACCTAATGTCTCCTTGTCTCTTCAAAATCTTTTGCTTGTTCCC ACCATAGCTATGAACCTTATGTGTGTGTCTTAATTTGCCAAAGATAACTAATGTTATTTTGAATTTAATCCCAACTTTTGTCTTGTAAAATCACAGAGTT CTACTAAAGTTTTGTTGCAAGGATCTCTCACCTCAGAGGGCCTTTATGCATTTCCCAACTTGATTTATAAGCTTGCATCAAGTCTGCCTACTTCTAATAT TTCTGCATCTTTTGTTTCAGTTTATACTTCCACTGTTTCTAAGCCTAGTCTTACATCTTATTTTCTATGGCATTGTAGACTAGACCATGCTCATGAGGTA ATAGTCAATAATGTTCTCAATGAATGTAACATACATCTTACTAATATAACTGCCCTAGATATTTGTTCAACATGTTGTTGTGCAAAAGCTCACAAGCTTC ACTCTTCTGCATCTTCTAACGTGTATGAAAATGCTTTTGATCTTCTCCATTTGGATCTTTGGGGACCTGCTCCTTATTCTAAATCTGGATTCAGAGCCTT GATGAGATTATAGACAAGTCACTGCGTAGAAAAGATGGTTCAAGTACATGTGAAGACTTTGTTAGTTTGGTCCAAACGTGGCTGAGCAAAATTCAGTGGT CAAACTCACTACGTGGCATTTTTGGTGAAACCAATCAAAGTGAGCTGGCAGCATTCACCTCATATGCATTGGCATTCCCCAATAACTTTCTTGCCCTTGT AGATACATATGATGTCATGAGAAGTGGAGTTCCTAACTTCTGTGCTGTTGCATTAGCTCTCAATGATTTAGGGTACAAAGCAGGTGGCATTAGATTGGAC TCTGGTGACCTGGCCTATTTGTCTTGTGAGGCCAGGAAGTTCTTTTCCTCCATTGAGAAGGAATTTGGAGTATCTGATTTTGGAAAGATGAGTATCACTG CTAGTAATGACCTCAATGAGGAAACTTTAGATGCTTTAAACAAGCAGGGTCACCAGGTTGATGCCTTTGGAATTGGAACATACTTGGTTACATGCTATGC TCAAGCTGCTTTAGGTGTTGTTTTCAAGTTGGTTGAGATAAATAATCAGCCTCGAATCAAGCTTTCTGAAGATGTGTCAAAGGTCTCTATTCCATGTAAG AAGAGATGCTATAGGCTGTATGGGAAAGAAGGTTATCCCCTGGTCGACATAATGACTGGGGAAAATGAGCCCTCTCCAAAGGTGGGAGAAAGAATCCTGT GCCGTCATCCCTTCCAAGAATCCAAGAGAGCATATGTGGTGCCACAACGTGTTGAGGAGCTTCTAAGGTGTTACTGGCCCGGGATTTCAGATAAAACTAG AGAAACTCTACCACCTCTAAAGGCTATTAGAGAGCGATGCATCAAGCAACTTGAGCAAATGCGACCTGACCACATGAGGAGACTTAACCCAACTCCATAT AAGGTTAGTGTAAGTGCTAAATTATATGATTTCATTCATTTCTTGTGGCTCAATGAGGCACCTGTTGGAGAGCTGCAGTAAAATCATAAGGCAAATAAAT GACATGCCTTGAAAAAGGTGATTATGGAAAAGAATAGGATTTTCCTTCTTATAGTATTATATGATTCTATATATTTGAGTTGGAGGAGCCATTACTCTTT CAAGGATTGTGTAATAAATTCATCTTTGCTACTTTGCCTTTGGAAACATTGCTATGCAAGTGAGAATTTGTTGAAGTCTCATGTTGGTTAATAATGTGTA ATTTAAAGACCTTATAAGTATTTGGATGATGCCACAGGTGTATATATGATTATTCAATGTGTTTTGACTGTTTTCAAATTATATCATTCTGTATATCGTT GGAGGAGCCACTATTCTTTCAAGGATTATTGGGATTTAATCCATCTTTGCTTTTGGAGTCATTGCATAGTTGTTTTTGTCCTACCAAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_48938; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_20000
| Blastp | Nicotinate phosphoribosyltransferase 2 from Arabidopsis with 86.22% of identity |
|---|---|
| Blastx | Nicotinate phosphoribosyltransferase 2 from Arabidopsis with 84.76% of identity |
| Eggnog | Nicotinate phosphoribosyltransferase(COG1488) |
| Kegg | Link to kegg annotations (AT2G23420) |
| CantataDB | Link to cantataDB annotations (CNT0002382) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446790.1) |
| Pfam | Nicotinate phosphoribosyltransferase (NAPRTase) family (PF04095.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |