| Id Trinity | FTRINITY_DN55154_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_22300 |
| Sequence | TACAACTCAACGCAGAATCTGTTAAACATTAATACAGAGTTTCAGTATCTTGAGAGTTTGAGATCTTGGAAACACTGCAAGCTCTAGTAATCATTTTTTT TAGTATTTTTTCAATAACCAAAAAAGATTCTATGCTTATCAGTTATCAACTTTTCCAATTTTTTCTTCTCTTTGTTAAATCATAAGTCATTCTAAATATT TCTCTATGTGTTGTTCATATTGGTGGCTGTTATGTACTTATGTCACATGTGCATGCCTTGAAATGGAAATGATTTTTTGTAGAATTTTTTTAATCTGAAA TGGGTTCCACATAGTTGGTAATGTTTCTACTTCATTCTGTCATTTTGATTATTTTTATTAACCTAAGTTTTATGGGTTCAAACTTTGACTTTAAGTAGTG GCAAGTTTTCATTTTCTTTTATTTGTTTGTTCTTTTTTGGTGTGGCTGTGACAAAATGAAACATGTTCATATGCACACCGTTCTTATCTCCTTTCTTCCC TGGATCTGCCGCTAATATATTCAAACACCTCTTAGAAACTTTTTACATGAAAACACAAACAAGAATCTCATGCATTTTTATTTTCATGAACTTGACTTCA TGTGATGGTCGTGAACAAATCTAACTTTGGAACCACTTTGAAAGCACACGTTGGTGTTTCTCAATCTGCTTTGTTTTTTGTTGCTTCACGTGCAAAGTTT CATATTTGATTACTCATTTGGTGAATGAATATATTAAACAACAATTGGATCCCACTACTTCTTTTTTCATTGAAACTAGAATAATGTTAAGTTTCAAGCT CAAAATTTCAACCTGATCTTGATTCTATAACAAAATAGTAATCTTTATTTACTTTGTAATCCTTGGCATGGTTGCTAACTTTGCTTAATGTTGAATTGTT GATTGTTTTTCATAGGTGGAACAAAGAAGACACTGAACTAATATGGCTTCAGAGAATGGCCTTGATGAGGCCACAACAACAAATAATCCTCCTCCTGCAG ACACAAATAGTGAAAAGAGCAAACAAAAAGAGAAAGTTGAGACTGTTCCATTTCACAAGCTATTTTCTTTTGCAGACTCAACTGATATTCTTTTGATAAC AATTGGAACCATTGGTGCCATTGGAAATGGTTTAGGTTTGCCTCTCATGACATTATTGTTCGGTCAAATGATCGATACCTTCGGAAGTAACCAGACAACA GAAAATGTAGTAGAACAGGTTTCCAAGGTCTCTCTGAAATTTGTGTACTTGGCAGTAGGATGTGGTTTGGCAGCATTCCTCCAGGTGTCTTGTTGGATGG TCACCGGAGAAAGACAAGCTGCAAGAATAAGGGGATTGTATTTGAAAACTATACTAAGACAAGATGTTGCTTTCTTTGATAAGGAAACAAACACTGGAGA GGTGATAGGAAGAATGTCTGGTGACACTGTTCTCATCCAAGATGCAATGGGAGAGAAGGTTGGCAAATTTCTGCAGTTAATTGCAACATTCATTGGAGGC TTTGTGATTGCATTTGTCAAAGGGTGGCTTCTTACTCTGGTTATGATGTCAACTCTGCCACTTCTTGTTGTCTCCGGCGCAACCATGGCCGTGATCATAG GAAGGATGGCTTCTAGAGGTCAAACTGCGTATGCAAAAGCCGCACATGTAGTTGAACAGACAATTGGCTCAATAAGAACTGTTGCATCTTTTACTGGTGA AAAACAAGCAGTATCTAGTTATAGCAAATTTCTAGTGGATGCTTACAAATCAGGAGTTCATGAAGGATCCATTGCTGGAGCAGGACTAGGCACAGTTATG TTTGTTATTTTCTGTGGTTATGCTTTAGCTGTATGGTTTGGTGCAAAGATGATAATGGAAAAAGGATATAATGGAGGCACAGTGATCAATGTGATCATTG CTGTGTTAACAGCATCAATGTCTCTAGGCCAGGCATCACCTAGCATGAGTGCTTTCGCTGCGGGTCAGGCTGCAGCTTTCAAAATGTTTCAAACAATTGA GAGGAAACCAGAGATAGATGCTTATGACCCAAATGGAAAAACACTAGAGGATATTCAGGGTGAAATAGAATTGAGGGAAGTTTATTTCCGTTATCCAGCG AGACCCGATGAGCTGATATTCAATGGATTCTCTCTTCATATACCTAGCGGCACAACTGCAGCTTTAGTTGGACAAAGTGGAAGTGGAAAATCTACAGTTA TTAGCTTAGTTGAAAGATTCTATGATCCACAGCAAGGTGAAGTTCTTATTGATGGCATTAACCTGAAAGAATTTCAGCTTAGGTGGATCAGAGGAAAAAT TGGCCTTGTCAGCCAAGAGCCGGTGTTGTTTGCATCTAGCATTAAGGATAATATTGCATATGGAAAGCAAGGAGCAAAAATTGAAGAGATAAGAATAGCA ACTGAACTTGCAAATGCTGCTAATTTCATTGATAAATTACCACAGGGATTGGATACAATGGTTGGCGAGCATGGAACTCAGCTATCTGGTGGACAGAAAC AGCGCATTGCCATTGCAAGAGCGATCCTTAAAAATCCAAGGATTCTACTTCTAGATGAAGCTACAAGTGCACTTGATGCGGAGTCTGAAAGGGTGGTGCA AGAGGCGCTAGACAGGATCATGGTTAACCGTACCACTATTGTTGTGGCTCATCGCTTAAGCACGGTGAGAAATGCTGACATGATTGCTGTAATTCATAGA GGGAAGATGGTTGAGAAAGGCACACACTCAGAATTACTCGGGAATCCAGAGGGAGCTTACTCTCAACTTATACGTTTACAAGAAGTAAACAAGGAAACAG AAGAAACTGCAGATCATCGAAACAAGAGTGAACTTTCTGCAGAATCCTTTAGACAATCGAGTCAAAGGAGGTCACTTGGAAGATCCATTAGCCAAGGATC ATCTGTAGGGAATAGCAGCCACCACTCATTTTCAGTTTCATTTGGTTTACCTACAGGAGTTAATGTCGCTGATACAGAACCCGAAAGCTCACAAGTCGAA GAAAAATCACAAGAGGTTCCACTCTCGCGCCTTGCTTCACTCAACAAGCCAGAGATTCCGGTGCTTCTGTTGGGATGTGCAGCTGCAGTAGCAAATGGTG TTATTCTTCCAATATTTGGCTTGTTGATTTCCAGTGTCATCAAAACATTTTATGAACCATTTGATGAGTTGAAAAGGGACTCTAAATTTTGGTCAATAAT GTTTATGATTCTTGGTCTTGCATCCTTCCTGATAATTCCAGCACGAGCTTACTTTTTCTCTGTGGCTGGATGCAAGTTGATCCAACGTATCAGGCATATA TGTTTTGAAAAGGTGGTGAACATGGAGGTTGGTTGGTTCGATGAGTCTGAGAACTCGAGTGGCGCAATTGGTGCAAGACTTTCAGCAGATGCTGCATCTG TGCGCGCCCTTGTTGGCGATGCCCTGGGACTATTAATTGGAAATCTAGCAACTGCTTTAGCCGGTTTGATTATTGCTTTCACTGCAAGCTGGGAACTGGC ATTAATTATCCTTGTCTTGATTCCCCTAATTGGACTCAATGGATATGTTCAAATGAAATTCATGAAAGGATTCAGTGCTGATGCAAAGATGATGTATGAG GAAGCAAGCCAAGTTGCTAATGATGCTGTCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49011; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_22300
| Blastp | ABC transporter B family member 4 from Arabidopsis with 72.15% of identity |
|---|---|
| Blastx | ABC transporter B family member 21 from Arabidopsis with 70.26% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT2G47000) |
| CantataDB | Link to cantataDB annotations (CNT0001001) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441256.1) |
| Pfam | ABC transporter transmembrane region (PF00664.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |