Ll_transcript_20780

• Id Trinity: FTRINITY_DN55167_c6_g1_i4
• Name Transcript: Ll_transcript_20780
• Sequence: CAAAAAGATATTTATATCAATTTCGCGGCTGTAATTGAAAGTCTTCAATACTATACACCTTTGAATAATGCAACATTTCCCTCCTCCACTCAATTTTCTA GTGGACTATACTAGATATTTTCATTCCAATGCTTATTATATTACGTTTAATGCTTAATAAAGGATGGGTTGGTTTCATTTTGCTACTTCAAACTTCATTC ATTTTTTCCTTCTATGCTCACTTCTTTGTGAAGAAATAATAAAAGGGGTATAGTTAGAGTTTAATGTGGGTATTGTTATTTGTATTACATAATAGTAAGG TTTATGAGAATGGGTGAAGAAGGGATTTTGCCAAAGATGATGCTTAATGTTTTGCTTGTTGAAGCTGATGATTCTACTCGTCAAATTATCTCTGCACTTC TTCGAAAATGCAACTACAGAGTTGCTGCAGTTTCTGATGGCTTAAAGGCATGGGAGACATTGAAGAACAAACCACTTGACATAGATCTCATATTAACAGA AGTGGAGTTGCCATCAGTATCTGGATTTTCATTTTTATCTTTGATCATGGACCATCATATTTGCAAAAACATTCCAGTCATAATGATGTCTTCTCAAGAT TCAGTTAGCATGGTGTTCCAATGCATGTTAAAAGGCGCTGCCGATTTTCTTATAAAACCTATTCGGAGGAATGAGCTGAAGAACTTGTGGCAGCATGTAT GGAGAAGGAGTGCTATTAGAAAGTCTCCTCAAAGTTTAACATCACCAGAGAATAAAGTTGAAGCTTCTGCAGGAAACAATGCTGCACATTGTAATTCTAC TGGTTCCGTCGCTTCTAAACAGAGAAACAAAGAATGCAGCCAGAAAACAAGTGATGCTCAAGATAAGTCCCAGCCGAAGAGTTCTTCTAATTCGAGCAAT ATCGACACTGACACAATGAAACACAAAGAGTCTAACAAATTTGAAAGGGAATCAGCGAAGCATGACGATGAAGCTGGAGAGAAATCTGCTATATTTGCAT CAGAAGCTTCAAGGTGCAACACTACTCTTAAATCGATAGGTTTAAGGCTAGATCAGTGCTATGATTGTGGGGAACAAGAAAACCAAGATGATGTTTTAAG AAGAGAGTTAAGTAGAGGTGATGTTCATGATAATACAGTTATTCATGGAAGGGGTGATGAATTCAAAGAACCTTGTAGAGAAGCTATTGACTTGATTGCT ACATTTGAGAATTTTCAAACGAGCCGTCGTGAAAATTGTAGCTTCAATGATGTTAACACAGCCAAGTTTGAGTTTGATACACAATTGGAACTTTGTTCAA GAAGAGACTCTCCTGGCAGCACATGTAATCCTGCAATTGAGGATAGGCAAACATTGAACCACTCTAATGCTTCAGCCTTTTCTCGGTATAGCAGTAGTAA GTTATTGCAGCCCCTTTTTCCAACATCATCAATCACTTCTGCTAAATCAACAAGCGCAGACTTGAATTCTCACGAATACCAAAATTTATCCGAAAATGCA AATACTTCTCATCAGTATGGTGGCAAAAATGAAAATCAGGAGAATATAACCACTCTAGTCATTGGTCAGTCTGAACAAATTGAACCAAAATTACAAAACA GTGAACATGTATTCTTCCCTATTGCTGAGGTTACTCTTGATCACAAGTCTAAAGGACATGGCAATTCTTTCACTTCCATGTTCTACACCCAATCAAGCAT CCATCCGATAATGACCCCGGAACAAGTGTACCGAAAAGAGAGTTCTCCATTTCCCACAAGTACTTCACCCCGGTCCAATTCTGAAAGTCACAACATAGAA TGTCATAACTCTTTGGATAGAGCTAGTAATACTTCTGATCAAAATGTAAATCATCAAAGCAAGTTGGATTGCACGGCGAATGACTCTCCTACCGCTAGCC AGAGTGCTGGCACTGGTTTTAACCATAATGCTGCAAATCATAATAGTAGTGGTGCATACGGAAGCAGCGTAGGTAGCGGAAGTGACCGAAATGATACTTC GTCTGTTGTGATAGTCAAGAACAACCCTCAAAGTTTTGATGATAGCTGTCATCAGAGTTATGATGGATTCAAGGAGATTGATTATCATCGAACCAGCCAA AGAGAAGTGGCTCTAGCAAAGTTTCGATTGAAGCGGAAAGATAGATGCTTTGATAAAAAGGTACGATATCAAAGCCGTAAAAGACTCGCAGAGCAGCGCC CTCGTGTGAAAGGACAATTCGTCCGCCAAGTAAACAATGAAAATCGGATAGCAGAATCTTGTGGTGGCACCTGAAATTTGTTAGTTACAAGTACATTAGT TGAATTATAGACTGACTTCCAACACTGATTAGCCTCAACAAGGATTAACTGTGTAGTTGTCTAGTGGAATTTGTTTGATCTTAGCATTCTTAGTGTTTTC TTCTAGCTTGTTATATCAAGTTATCAACTATTTGGAATTTGGGATTGTTATTATTTAGTGTGTTTGATCAAAGGTTTTTTATTTTACCTTGTTTATGTTT TATTGCTTGAATACATACAAGGCTGAAGTTAACTAGTCATATAGTTATAGGCCTTTAAGCAAATGTATTGGTACTTCAAAAATTTGGGAAGACCATAATA TTGAACTTTCTAGTGTAAACCAATCATTTCCACAAACTTGTGTTGGACCAAATCACAACCCAGGAGACTTCAACTATCGAAGAATTCTATTGTTAATAAG GCATGAAAAAAGTGGAG
• Tissue: flowers
• Gene name: LI_gene_49124;
• Additional information: details;

Expression of Ll_transcript_20780

FPKM

• FPAB: 11
• FPNAB: 5.8
• LF1: 2.7
• LF2: 2.8
• LF3: 5.8
• LF4: 6.3
• UF1: 0.9
• UF2: 1.9
• UF3: 7.1
• UF4: 8.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_20780

• Blastp: Two-component response regulator-like PRR95 from Oryza sativa with 36.3% of identity
• Blastx: Two-component response regulator-like APRR5 from Arabidopsis with 67.09% of identity
• Eggnog: Transcription factor(COG5641)
• Kegg: Link to kegg annotations (4347674)
• CantataDB: Link to cantataDB annotations (CNT0000119)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432881.1)
• Pfam: Response regulator receiver domain (PF00072.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;