| Id Trinity | FTRINITY_DN55174_c6_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_20428 |
| Sequence | CTTTCTCGGGGACTGGTATGCTTCAGCTTTTCTAATTGCAACTGCCAGTCTTGAGACTTATCTCTGTCTTCTAAAGTGTGATATGCTCTGCATCTTTTTT ATTTCCCTACTTCCCTTTTTTTTGTTTTTGTCAAAGTTTGCGAATGAACATGCTTGTTTGAATGTCTTTTTGCCTGAATGTTAAATTTTCACCACATGTT TTGCACCATAAAGGAAGAATGTTGAGATGACTTGGTTAACTGGATTAGTGGATCTGATTGTGTTTCTACTTTTTAATTGTTCCTATAGGGGTATTGACAC AAATAGAAGTATATTTCCATTTTAAGAATGAATAGCTGTACACAGATCAGTTGTAATAGTATTCACTCTATAAATAGACCAAGTTAATCTCAGGTAAATG AATAAATTAGTTAACAGTTTCCTTTCTCTCTCTCATCTTAGCTTTCTATGTTTTCTTATAACAGTTCAATGAACTTAAAGGCAAAAACAGTTTGCATTTC ATCCTTTCCTGCTTTTTGGTTATCAATATTATTCCTCTCTTTCTGTAGGCTTTAAGTCATGACTTATCTGGTTCCAATTAATAATTTCACCAAGCAATTA AACTATTCAGTCTACAAGGATTCATCTAAGGACTTGGTTCAAACTGACAGGGATGATCCCAGCCTACCTCTGGTTACCGCTCCATTTGGGCATGCCTCCC AGGAAATTGTAAACCTTCTGCTCTGTGGGCAGGCTGTGCCTAATGTGTTTGATGGGAAGATGGATTTAGGAGAGGAAATGTTTCTAAAAGGTATATCTCA ACATGTAGAAGTTGGATTTCTCACACTGCTAGAATCCCTGAATTTCTGCAAGGTTGGTCAGTATTTGAAATGCCCAAAGTGGCCTATATGGGTTGTTGGG AGTGAATCCCACTACACAGTACTGTTTGCTCTTGAGACCAGTGTTCAAAACGAGAATGAACTGGAGGAAAGGGAATCACAGATTCGCAAAGCTTTTGATG CACAAGATCAGAGCGGAGGCGGTGGTTTCATTAGTGTGGAAGGGTTCTATCAAGTGCTCAGAGAAACGGATATTAAACTTCCACAAGAGAAGCTTGAGCA CCTTTGCAGCACAGGCTTCATTGTATGGAGTGAGTTCTGGCAAGTCATTTTAGATTTAGACAAGAGCTTGGGAGGTTTAAAGGATTCATCGGGACTGATG GGTAAGAAGGTTTTCGACCTCTACCATTTTAATGGAATTGCTAAATCAGATCTTACTGGCAGTCATGTAAATGCTAGGGGTGAAGCTCCACTACAAAGAC CCAGACTCACAAAATTGAGTGTTTCTGTTCCTCCAAGGTGGACGCCGGAGAAATTTATGGCAGACACGGCAGTTTCTTCTGCTACTAGTGCAAACGATTC TTCTTTGAAGGACACTGAAGTATCTAAACCCGAGCCTTCTCAGCATGCACCTCTGGTAGACTGCATAAGAACGCGCTGGCCTCGTGCCGTCTGCAGCTGG TCAGGGGATCCTCCAAGTATAGTTTAAGGGGTTTACATGGAGTCATTTGTCGCGGTTTTGTTGGTGTAACATAAAAATAATTGGTTGGTTTAGCAATGCA ATAAGGAAGAAGAGATGAAGTTTTACTTTGATGTTGGAATTCAAGGCACAAACAGGGGTGAAGTATCCTTACTTTCTCAACTATGTGCTTAGCCATATTT ATAATGTGGAGTGATGTATCTTAAACATTGTTTGTGATGTCATTCAAAAGGTTACAAGGAAGAGGGATGTTATATTTGTTGTGAAGTCAACTTGTAAAAT CTATTTAAATGTACTATAGTCATGATTAGAAAAGATTTACTTCTTGGGAGATTATTAATAAACAAGAAGATCTTGCATTTAAAAATGTTGTAATACTAAA TTATTTAGTGCTTGGCTTCTGAATAAGGTAAGTTGAATATTTATTATATTTACAATAATATGATAAATTGTGAGTTTGGCGCTTTAGTTAGGTTGTTGGG TAGTGAGTCGATTTAAGTGGGAGACTCATGTATGAGCCGATTTGTTTTTCTTTATGATTGTGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49185; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_20428
| Blastp | Ubiquitin carboxyl-terminal hydrolase MINDY-3 from Bos with 33.08% of identity |
|---|---|
| Blastx | Ubiquitin carboxyl-terminal hydrolase MINDY-3 from Silurana with 29.65% of identity |
| Eggnog | family with sequence similarity 188, member(ENOG410XSGV) |
| Kegg | Link to kegg annotations (538509) |
| CantataDB | Link to cantataDB annotations (CNT0001500) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413527.1) |
| Pfam | Domain of unknown function (DUF4205) (PF13898.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |