| Id Trinity | FTRINITY_DN55180_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_20100 |
| Sequence | TACCTGAAAATATTTAACAAGGACTACAATGCTGTGTACTTTTTGATGAAGTGCTGTTTTTCGTTATCATTGATTTGCTCATTTCTTTGTTTAAATGTAT ATTTTTGCTTCCATTTGCCCATATGATAGCTAGTTGCATGATTTTAATATTATTAAAAAAGCACGCATTAGAAGAAATAAGGATTGAATATCTCTTGATT GTAAGCTTTGCTATCTCGACTTTGTTTGAACTAGTTTGTGTTTTTTTGGGGGGGATGAGAAACTGAGTTATAATTTTAAACACTAGAAAAACATGGAAGT CTCCTTTCAAGTTATGACACTAGAAAAACATGACCAAGTGTGAATTATTTGAACTGATATTTGTTTCATTTTTCTTGGGTTTGGTGTACTAGTTTGTTGG ATTTTTAATTTTAGACTTTGTCCTTGAACCAGTTGTCTAGGCCTTCGGCACATCTTGATATTCTGTTGTTTATTGTTTGTAAATTCATGTTTCTGGTCAA TATTTTTATGGCAGGGATAATTTTTGCAAATGAAATCAAGGCAACAAGGCTTAAGTCACTGACTGCAAATTTGCATCGCTTGGGTGTATCAAACACCGTG GTCTGTAACTACGACGGAAAAGAGCTTCCGAAGGTTTTAGGTCAAAATGCTGTTGATAGAGTATTGTTGGATGCCCCTTGCAGTGGAACTGGGGTTATAT CAAAAGACGAGTCTGTTAAAACCTCGAAAGATTTGGAAGATATACAGAAATGTGCACAACTCCAGAAGGAACTTATTCTTGCTGCAATTGACATGGTTGA TGCCAATTCAAAATCTGGCGGGTACATTGTTTATTCCACATGCTCAATCATGGTCGCTGAGAATGAAGCAGTTATTGACTATGCACTCAAAAAGAGGGAT GTAAAATTGGTTCCATGTGGACTTGATTTTGGGCGTCCAGGGTTTACAAAGTTTAGGGAACTACGCTTTCACCCTTCTTTAGAAAAGACAAGGCGTTTCT ATCCCCACGTACACAATATGGATGGCTTTTTTGTTGCAAAGTTGAAAAAAATGAGCAGCTCAAAGCCAAATTCAAAATTATCAGAACCATCCGAGAATGA GGAAGAAGAGACTGAGCTTGTGGAGGAAGAAGAGACTGGGCTTGTGGAGGAAGAGGAGAAGCCAAGTAACGACCTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49230; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_20100
| Blastp | Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase from Homo with 68.62% of identity |
|---|---|
| Blastx | Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase from Homo with 62.04% of identity |
| Eggnog | nOP2 Sun(COG0144) |
| Kegg | Link to kegg annotations (4839) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447055.1) |
| Pfam | 16S rRNA methyltransferase RsmB/F (PF01189.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |