Ll_transcript_20088

Id TrinityFTRINITY_DN55180_c1_g1_i4
Name TranscriptLl_transcript_20088
SequenceTACCTGAAAATATTTAACAAGGACTACAATGCTGTGTACTTTTTGATGAAGTGCTGTTTTTCGTTATCATTGATTTGCTCATTTCTTTGTTTAAATGTAT ATTTTTGCTTCCATTTGCCCATATGATAGCTAGTTGCATGATTTTAATATTATTAAAAAAGCACGCATTAGAAGAAATAAGGATTGAATATCTCTTGATT GTAAGCTTTGCTATCTCGACTTTGTTTGAACTAGTTTGTGTTTTTTTGGGGGGGATGAGAAACTGAGTTATAATTTTAAACACTAGAAAAACATGGAAGT CTCCTTTCAAGTTATGACACTAGAAAAACATGACCAAGTGTGAATTATTTGAACTGATATTTGTTTCATTTTTCTTGGGTTTGGTGTACTAGTTTGTTGG ATTTTTAATTTTAGACTTTGTCCTTGAACCAGTTGTCTAGGCCTTCGGCACATCTTGATATTCTGTTGTTTATTGTTTGTAAATTCATGTTTCTGGTCAA TATTTTTATGGCAGGGATAATTTTTGCAAATGAAATCAAGGCAACAAGGCTTAAGTCACTGACTGCAAATTTGCATCGCTTGGGTGTATCAAACACCGTG GTCTGTAACTACGACGGAAAAGAGCTTCCGAAGGTTTTAGGTCAAAATGCTGTTGATAGAGTATTGTTGGATGCCCCTTGCAGTGGAACTGGGGTTATAT CAAAAGACGAGTCTGTTAAAACCTCGAAAGATTTGGAAGATATACAGAAATGTGCACAACTCCAGAAGGAACTTATTCTTGCTGCAATTGACATGGTTGA TGCCAATTCAAAATCTGGCGGGTACATTGTTTATTCCACATGCTCAATCATGGTCGCTGAGAATGAAGCAGTTATTGACTATGCACTCAAAAAGAGGGAT GTAAAATTGGTTCCATGTGGACTTGATTTTGGGCGTCCAGGGTAATTATTCCATTCCTGTGTACCTCACAAGTGGCAACTTTAGTTTTGATTATTAGTAA TTGCTTATGTTGTGACATTTTCATTGGCAGGTTTACAAAGTTTAGGGAACTA BLAST
Tissueflowers
Gene nameLI_gene_49230; 
Additional informationdetails; 

Expression of Ll_transcript_20088

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_20088

BlastpProbable 28S rRNA (cytosine-C(5))-methyltransferase from Mus with 67.83% of identity
BlastxProbable 28S rRNA (cytosine-C(5))-methyltransferase from Mus with 59.65% of identity
EggnognOP2 Sun(COG0144)
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019447055.1)
Pfam16S rRNA methyltransferase RsmB/F (PF01189.16)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;