| Id Trinity | FTRINITY_DN55181_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_21712 |
| Sequence | ATTCTTCGTAGCGCAGTGCAAGTAGCGACACTTATGCCGCCTCCAAATTTCGTATAAGGTCTCACTTTTTTTGCTCTTCACCAAAACCTTACGAAACCCT AAGCTCCAAGTTAACGAAGTTTCAGGCTTATACAGAAAGATGGTGCATTATAACTTTAAGAAGATTACTGTGGTTCCAAATGGGAAGGACTTCGTTGATA TCATCCTTTCTCGCACCCAACGTCAGACACCAACAGTTGTACACAAGGGGTATGCAATTACCCGTCTCCGTCAGTTTTATATGCGTAAAGTGAAGTATAC CCAACAGAACTTTCATGAAAAGCTCTCCACCATCGTCGATGAGTTCCCTCGGCTTGACGATATTCATCCTTTCTATGGCGATCTCCTCCATGTACTCTAC AACAAAGACCATTACAAGCTTGCGCTCGGACAAATCAATACTGCCAGGAATCTTATTGGTAAGATTGCCAAGGACTACGTGAGATTACTGAAATATGGTG ACTCACTATACCGGTGCAAGTGTCTGAAGGTTGCTGCTCTTGGCCGCATGTGCACTGTGCTGAAAAGGATTGGCCCAAGTTTAGCTTACCTAGAGCAGAT TAGACAACACATGGCTAGGCTTCCATCAATTGATCCAAATACCAGGACTGTCTTGATTTGTGGATATCCTAATGTTGGCAAGAGCTCATTCATTAACAAA ATTACGAGAGCTGATGTGGATGTTCAGCCTTATGCTTTCACTACAAAGTCACTCTTTGTAGGTCATACAGACTATAAGTACCTCAGGTACCAAGTAATTG ATACCCCAGGGATTTTGGACAGGCCTTTTGAAGACCGTAACATTATTGAGATGTGCAGTATCACTGCCCTAGCTCATCTGAGAGCCGCAATATTGTTTTT CTTGGACATCTCTGGGTCTTGTGGTTACACTATTGCACAGCAAGCAGCACTTTTTCACAGCATCAAGTCTCTGTTCTTGAACAAACCATTAATTATTGTC TGCAACAAGACTGACTTGCAGCCCCTTGATGGGTTATCCGAGGAAGACATGAAATTGGTCATGGAGATGAAATCTGAAGCCTTGAAAACTGTAATTTGTG AAGGAGGTGAAGCTTCAAATGATGAGGGCGTATTGTTGACAATGAGCACTTTGACTGAAGATGGGGTAATTGCGGTGAAAAATGCAGCATGTGAGAGGTT ATTGAATCAGAGGGTGGAGATAAAGATGAAGTCCAAGAAAATTAATGACTGCTTGAATAGGTTTCATGTCGCATTGCCAAAACCCCGTGACCAGAAAGAA AGGCCAGCATCTATTCCTCCAGCAGTTATAGAAGCTAGGGCTAAGCAAGCAGCTGAGAATGAAAAGAGGAAAACTGAAAAGGAGCTGGAGAATGAGAATG GTGGGGCAGGTGTATACTCAATGAACTTGAGAAAGCATTACATTTTAGCTAATGATGAATGGAAAGAAGATATACTCCCAGAAATTTTGGATGGTCACAA TGTGTATGATTTCATTGACCCTGATATTCTGCATAGGGTTGAAGAGTTGGAAAGAGAAGATGGGTTGAGACAGGAAGAAGAGGAAGATGATTTTGAGATC GATGGAACTGAATTGACTCCAGAACAGCAGGCAGCTTTAGCTGAGATTAGGAAAAAGAAAAGCCTGCTCATTCAACAGCATAGGATCAAAAAGAGCACTG CAGAGAGCCGGCCAACTGTTCCAAGGAAATTCGACAAGGACAAGCAGTTCACCACAGAAAGACTGGGAAGGCAGCTTTCGTCTTTGGGGCTTGATCCCAG CTTGGCAATTAACAGGATGCGCAGCAGATCTGTATCTAGGAAAGGTCGAAAAAGGGACAGATCAACTGAAAGTGCTCATGGTGGAGACGGGATGGATATT GATGGTGACACACCTAGCAAGAAGCAGCGTCTCAGTAGGTCACGGTCACGGTCCAGGTCTGTGGCGCGCCCTACAAATGAAGTTGTGCCTGGAGAGGGCT TCAGGGATTCTGCTCAAAAGAGCAAGGCAGTTAAACTTGCAAAGAATTCTAATAAAAAGAGAAACAAGGATGCTCGTCGTGGAGAAGCTGATAGAGTTAT ACCTAATCTGAAGCCCAAGCACTTGTATTCTGGGAAGCGCTCCAGTGGAAAAACTGATAGACGTTAAAATAGGTAATGTATTTTGCAATTATTTTCTACA GGCAATTCTATTTACACCTGCAAAAAATCTAAACAGCCTGACATTATTTAAGAGAGTGGGTGTGAGAGTTGAGGAAGATAGCATGGATCTATTAACTTGT TTTTTATGGATATTTAAATGCTGATTATGAAATTTTCAGTGGAATTTTTTTTGTATTCAATATCTTTATGGGGTAAAGGTAAATGCGAGTTTCTTTAAAG AAAATTTGTACCTAGTCTTTTCCATGATGTGAATAGAGTTGTCCTTTTTTACTCGTGCACCCTTTCTTACAATACATGCTTGTGTAATAATTGCCAACTC AACTGCATTCCCCAGTAGTTTATTTTCCTTCTCATACCTTTAAAGCATACCCATATAGATATACTTGTTTGATATAATAAATTGGCTTTAAAATTACTAA TTAGTTAAAAGTTTTCTTTTCTCTACAGGGGAGGCTGATTCATGCTTTTCAGAGCCATCTTTTGGCGTGGTTTGCAGCTTTCAAGAATTTTGTTCTTTCT TAAGTTTTGTTTTGTTGGAGTTTCGAACTTATTATGGTCATGACAACAAAGCTTTCTTATATACCCTGTCTTAATTTTCATTATTATCATGTTGTCCTTC TGTCTGTTGCAATGTTATTGCTCACTTTGTTAGTCTTTATTTATTCAGTTCAATTTTGAGGACCTGCTGTTTAAATTTTAAAATTTGTTTCATTGGTTGA TGTTTATGTACTCAGACCAAATAAAGAAGCATATGTTATACATGTTGCAGATGGTTTTTTAAGTTAAGTTCAATTCCCCCGACTGATTAATTTGAGAGTG ATTTTGTTCTTTTCACTTGAAAATCTTGTGTTGCACAAAAATAGAACCTAAGTGTAAGAGCTTTGATAATGTAACCCCGAGTTCTGATTCCGTTATAGAA AAGGATGCATTATTGTTTATATATGCTGCACCTGGTCAATAAGCATAATCATTTAATCAATTACTTTGGCGGTTCAAGTTTTAGTTTGTCAAATTAACTG TCTTTTGAAAGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49238; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21712
| Blastp | Nucleolar GTP-binding protein 1 from Arabidopsis with 75.62% of identity |
|---|---|
| Blastx | Nucleolar GTP-binding protein 1 from Arabidopsis with 74.3% of identity |
| Eggnog | Involved in the biogenesis of the 60S ribosomal subunit (By similarity)(COG1084) |
| Kegg | Link to kegg annotations (AT1G50920) |
| CantataDB | Link to cantataDB annotations (CNT0001219) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448598.1) |
| Pfam | Ferrous iron transport protein B (PF02421.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |