| Id Trinity | FTRINITY_DN55187_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_22324 |
| Sequence | GTTCCATTAGAAAAAGACAAAAGAAGTAATAAGAAGAAAAAAAATCCAAAAAAGAATGGTATAAGATCGCCACTGTCACATCACATTTGTGATTGGTCGC TCTCTTTTTTTTGGTCTTTCTTCTCGCTGTGTCCTTCACTTCCTTCTTCTCCTTCTTCATAGAATGACAGTTTGTTCATCACCTTCATCATCGTTTGAAT CTTCCAATAACGGAAAAACATGGATCATCCATGGAATTGTAGCAGGAGTAGCAGTTACAGCAGCTGTGGTTGCACACGCTTATCTTAACCGATTCAACAA ATTCCGGACCCGGGTCGTAGGCATCATACCCGCCCGATTCGCTTCTTCTCGCTTCCCGGGAAAGCCTCTCGTTCAAATCCTTGGCAAGCCCATGATCCAG AGGACATGGGAAAGGGCAACGTTGGCAGCTACATTGGATCATGTTGGTAGGTTTATCTACAAGATCTTCCTACAATCTGGCATGAATATCTTTGATATAT TACAGTCCTAGATTATTCTCTGAAATCGTTATGAAACACACGCCTCTAGTCTAAGTGAAACTAAGATTAACATATAATTTGTTGCCCTTAGCCACAGAAT ACCTAAGTGAAACTAAGATTAACATATAATTTGTTGCCCTTAGCCACAGAATACCTAAGTGAAACTAAGATTCACATATGTAGATTTTTGCTTTGAGGGT GAACTGAAGTTTTTATTTCTCTTTCATATGCATGCCCAATATGTTTTGCTGCTACAAGGCATTGAACAGAGACATAACTTATGCTGTTGCACAAATACAT CCTTAAACTGTATGGGTAAATTATTTGCATTGTATTTCTGCATTGCAGCTTACACTGACATACTGTTTTTTCACCAATTCATGCATGCCAAACCTCTTTC CGGGCTTTTAAAGGAAATAAATTATCAATGTTTCCAAGAGACCAAGATCGAACAGCTTTGCATTGCATTCCTTTCTGACTGTATTGGAACTAATTTAAAG AGAGATTTGGTTGGGGTTGTGGTATACCGTATACACAGATTTAAGTGCATTTCATACTGTATGTCATCAGTGCATGTGCATCATATACAAGAACAAGATA ACCACTTATACAATTTGGTAGTCTTTACATGCATCTGTGCACATCTGGCTTGCTTCTTTGAAGTCAATTTGGTAACTGTCTCTTGCTATAGTTGTGGCAA CTGATGATGAAAAGATTGCTGACTGTTGTCGACAATTTGGAGCTGATGTGATAATGACATCAGAATCTTGCCAAAATGGTACTGAGCGCTGCAATGAAGC CCTACAGAAGCTTGGGAAAAAATATGATGTTGTTGTCAACATTCAGGGTGACGAGCCTCTCATCGAACCTGAAATAATAGATGGTGTTGTCAAAGCTTTG CAGGCAGATCCAGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAACCCTGAAGATGCTCATGATCCAAATAGAGTGAAATGTGTGGTAGACAATCGTG GTTATGCCATCTATTTTTCACGGGGATTAATCCCATTCAACAAGTCAGGGAAGATTAATCAACAGTTCCCATATTTGCTTCATCTTGGGATTCAGAGCTA TGATGCAAAGTTTCTAAAGATATACCCGTATCTTCAGCCTACTCCGTTACAACTTGAGGAGGATTTGGAGCAGCTTAAGGTCCTTGAAAATGGCTATAAG ATGAAGGTAGTCAAAGTTGACCATGAGGCCCATGGTGTTGACACTCCTGAAGATGTTCAAAAGATAGAATCTCTTATGCTTGAGAGGAACTTGGCTTGAA CTCTACTTCAATGAAATCAAGTGTAAGCTAAGCATTAGTAACAATGCATCATAGATAAAGATGGTGTGTAACCCTCTATTTATTTTTTGCTTGTTGCTTT CAACAACTTAGCACAAGTGTCTTGATTTATGATGAAATATTTTAGTATAGGTAATAGGAAATCCCTCCCATTTAGTGAGAATGCAAACTTTTGGTTTAAG ACTTTGAGATAGTGGGACTCCTCTCCATTAACTGGTGTGTAAAAGTAAAGAAAAAATAGCACATAAAAACATTTATATCCTTTTTATTTAAAATGATATT ACATTTTTACCCTTAAAATACAAAGAAAAAACTCACTTGTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49299; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_22324
| Blastp | 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 86.19% of identity |
|---|---|
| Blastx | 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 86.21% of identity |
| Eggnog | Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (By similarity)(COG1212) |
| Kegg | Link to kegg annotations (AT1G53000) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413598.1) |
| Pfam | Cytidylyltransferase (PF02348.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |