| Id Trinity | FTRINITY_DN55191_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_21242 |
| Sequence | GTGAATAGTAGTTTTTCATCGTCGGATTTCAATCCGCGAGTTCTTCTTCACTATGGTGTTCCATCAAATGCGTCTATTCTTGCCTTTGATCGCATCCAAC GTCTATTGGCAGTGGGAACACTTGATGGCAGGATAAAGGTGTTTGGTGGTGACAATATTGAAGGGATTCTTTTCTCTCCGAAGCAAACATCCTTCAAGAA TTTGGAGTTCTTGGAAAATCGAGGTTTTCTTGCTAGCATCTCAAGTGATAATGAAGTACAGGTTTGGGATTTGGAAAGCAGACAAATTGCTTCTGCTTTG AAGTGGGAATCCGCTATAACTGCTTTCTCTGTTATTTATGGCACCAGTTACATGTATATTGGAAGTGAACATGGGATGGTATATGTGTTGAAGTTCGATT CTGAAGACAGAAAAATTGAAATATTGCCTTATTATGTTCCGACAGATGTTATATCTGAAGCAGTTGGAATGTCACTTGATAATGTTTCTGTTGTCAAAGT TCTTCATCAACCTTGTTCCAATGGAAACAGACTTTTGATTGCGTATGAGAATGGTGTGATTGTACTATGGGATGCATCTGAAGATCGAATTGTTCTCATC AGAGGCTACAAAGACACTGAATTAAAGAGAATACACGTGGCTAGTTTTCCAAATGACCCTAAAAACGAACTTTCTGATGATCAATTAGACCATGAAGAAG AGGACAAGGAGATATGCTCTGTTTCTTGGGCATCGAGTGATGGATCAGTTGTTGTTGTTGGATATGTAGATGGTGATATAATGTTTTGGGATTTATCAAC TGCCGACTCTCCCTCAGGTCAAGCCCAAAAAGTGTCAAAGATTGTTATCAAGCTTCAATTATCTTCAGCAGATAAAAGACTCCCTGTTATTGTTCTACAT TGGTGCCCTACTAAATCTTTAGACAGTAGTGGGGGCCAGCTTTTTGCCTATGGTGGTGATGAAATTGGATCTGAAGAAGTTCTGACAGTTTTGAGTCTTG ATTGGTCTTCTGGGATAGAAAATCTTAAGTGCACCGGCCGCATTGATGTCATGCTTAGTGGTTCTTTTGCTGATATGATTTTGTTGTCAAGTGATTTCCA GACAGAGGGAGCTTGTAATATGCTATTTGTTTTGTCAAATCCTGGACAACTGGATCTTTATGACAAAGATTGTTTGTCTTCTTTGATGTCTCATCAAGAA AAGAAGACTTCTGCTCCCGCAATGCAATATCCCATGGCCATACCCACTCTTGAACCATACATGACAACAGCAAGGCTTGGCGTGGTATACCAAGATGTGA AGTCATTTAAGGCCTTATCAGAGATTCTTGTAGCTGCAAAGCAGCATTCAGTACAAAATCAGACAAGTATGGGTATAAAGTGGCCTCTGACTGGTGGTGT TCCAGGTCAGATTTTCAAGGAATACCATCACATCATTCAAATATATATAGCAGGTTACCGAGATGGTTCTATTCGGATATGGGATGCCACATATCCTGCT TTGTCACTTGTTTACAACATAAAATCTGAGGTGAGTGATATTAAAGTTGGTATTGCAAGTGCACCAGTGTCAGCATTGGATTTTTGCCCTGATACTCTAC ACCTGGCTGTTGGCGATGAAAGTGGTGTTGTTTGTCTATATGGGCTAATTCGGAGTTCAGCTGACACAACTTTGCGCTTTGTTACAAAAAACGGAACTGA AGATCTTAAAAAGCATCAAGGGGACAGACCTCATTGCACAGCAGTTTTTTCCCTTCAAAGTTCTGCTGTATGCACCCTACAATTTGCAAGCCTTGGAGGG AAGCTTGCTGTTGGATATGAACATGGGCAGGTGGCTTTGCTTGATATCAGCTCATCATCAGTTTTGTTTCTTACAAACACTGAATCAAACACATCCTCAG CACTCGTTTCTCTAAATGCAAAATTTTCAGACGTTTGTAGCTTAAATATTCCACAGGAGTCTGTGTCTGATATTTCAGATAGTTCTGGAAAGGGACCAGT CTTTATTATGACAAGGGATGCAAACCTTGTTGTGATAGATACTGCAAAAGGGGACGTGGTTTGCAGTAGAACGATGAACCCAAAAGTAAAGTCCAATGCA ATTTCAATGCACATTCTAGATGGTACTTCAGAACTATCCACTGAAAAAATGTCATCCAACTCTCCTCAGAAAAATGACTCTGGAATCCAAGCTATCATTC CATCTGAAAATGCACAAGTTGAAACTTCTACTCCACTAGAAAATTCATATCTGGGGCTGATAGCATTGAACTCACTCATTTTACTTTGTTATGAGACTGA ATTGAGCTTACACTCTTTAAAATTTGTGATTGAGGTACCACTCTTCCTGTCCATCATTATGTTATACTTCAAATTTCAATTTATTCTTTTCTACTGGTTA GTGAATTACATAATAACAGGGTAGCAGTAAGTACATACGGAAGGTGAACCTTGTACAACGATGCTGCTGGACAACAACCTTTAAGAAAGATGAGAATGAA TGTGCTCTGGTTGTACTGTATCAAACTGGAGACATTGAATTAAGGTCCTTACCAACTCTGGAAGTGTTTGGAGAAATATCTTTGATGTCAATCTTAAGAT GGAGCATGAGGAGCGAAATGGAGAAGAGAATATGTTCTTCCTCAAATGGACAAATTATTCTGGTCAATGGGAATGAAACTGCTGTCCTATCACTGTTGAC CCGTGAAAATGAGTTCTGGATTCCAGAGTCCTTTCCTTCTCTTCATGATAATGTTCTCGCAGCAGCAGTAGATGTTAATACTAGCTTATCTCCAAACCAG AATGAAAGACAGGGAGCACCTGGTATCTTCATTAATTTTGTTAAGAACTTTAAAGCGGGGAAAGCAGATCAGAATGCAATTCAAGCAAATCATGCTAATA GTTTGGAATGGATATTCTCTTATCCTCCTTTCTTAAAGCCTTCCTTAGACACAGCAGATACACACGATGCTTTTGAGCTTGACATAGATGAAATTCATAT TGATGAACCTTTAGTAGTTATATATCCTCAGAAAAGTGATACTGACAAGAGAGGGAAAGGAACCGACCGAGAGAAATTACTGGAAGGTGCAAGCACTGAT TCAAAACCAAGAGCTAGAACAGCTGAAGAAATTAAGGCTAAATACAAAAAGACGGGGGATGCCTCAGCAGCAGCTGCACTTGCAAGGGATAAGCTTGTAG AACGGCAAGAAAAACTCCGGGTAGATTATTATTTCCATTCATTATTTGTATCTCATCCCAACAGGTTCAAACCCCATTTTCTCATTCTCAAAGAAAATAA AAGCCCGAATTACTCATAAATTATATGGAAAAAACTTAATTTTAACGAAAGTTTCCATATATCAATGGAAGTTTCTAGTCTGAGGCTGGTGAGTGACAGA TTTGGGTCTAATCTTAGTTATGGTTAAGGTCCCAGTGAAGTCTACTAACATGTCTAGCTGCATGACATAATACACATTACATATTCCTAATAAATTCCAC TTTAGCTCCTTATGAATTTTAACAATATAACTTCTGTTCTGTTCTGTTCTTAATTACATCTCACAATGATGAAAACAACTTTGTCTTTAAATAAGTAGTT CTCACAAAAATTACCACTTCGAGAACTCGAAGTACTTTTGTATTCTTAATTGAAACTTAGCTGAAACTCTCCAAAATATGTTCATTATTAAATCACATCC CCGGGCCACATTTACTTGGTAATTTTTCCTTGCCGTTTATACTAGATGCTCAACCAACGCACTGAAGAGTTGCAAAATGGTGCACAAGACTTTGCATCCA TGGCAGCTGAACTCGCTAAGAGGATGGAAAATCGTAAATGGTGGCAGTTATGAGTCGTTGCGTGATTTATCCACTAGCAGTTGAAGTTCTGGACTAGTGA ACTGAACTGACTTCTTTCCGAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_49322; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_21242
| Blastp | Syntaxin-binding protein 5-like from Homo with 22.6% of identity |
|---|---|
| Blastx | Syntaxin-binding protein 5-like from Homo with 23.1% of identity |
| Eggnog | syntaxin binding protein(ENOG410XTER) |
| Kegg | Link to kegg annotations (9515) |
| CantataDB | Link to cantataDB annotations (CNT0001782) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433667.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |