| Id Trinity | FTRINITY_DN55199_c1_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_20392 |
| Sequence | GTCATTTCACATTTCACTTCTTTTTTTTTCATTTATTTTAATTCAAATTTCTTCTTTCTCTTTTCAATTCAATTCTCTTCATTTTCAATTCTTTCTCTCT TCTCTTTCGGTATGCAACGTTTCTCTCAAAACGACTTCGTTTCATTCCATCATTCTCACATTACAATCCAAACCCTAGCTCTATATTCCATTCCATTGCT TCATTATAACTAAATTAAAGCAATTTTTCCTTCAATTGAAAGCAGAATCATAATTGGGTTTCATTTTTTTGTATTGGTTTAATTTGAGTATCTAAAAGTA TGTTTTTTTGGGTTTCATAATTTTGGGATTTTTTTTCCCATCTTATAATCCATATAATGTGTTATAGATCCTTTGTTTCTGAATAGTATAACTGTTTTTA TTCTCATCTGTTTGATATTACTATATTTGAAGAATGGAATGTTTTTTTATGAGTGTGATTATTTTGGGGATTTATTTTGCTATCTTATCATTCACACCAC AAATCAGACTATGTGTGCTTGATGCTATACATAACTCGGATAAAGTGTGAAGGTTGTGTTAGACAATCAACATCGACATAAAATTTGCCGAATCTATATG ATATGGATCACTCATACCATGTGTTATATATGTTTTGTTTCTGTATAATATAATTGCTATTGTTCTCATTGGTTGTGAATTACAAATTTTAGTTGTTGTA TATTGAATTGGTTTATTTGCTTCCTTATTTAGATTCTAAGGTCAATAATCTATGGATATCGATAAAATTTTGGGTACTACCAAACCTGCAAGTTTTCCAA GGAAGAGTGCTATTTATGTGTGGGGATACAATCAATCTGGTCAGACAGGGAGAAAGGGGAAACAGGATCAGCTGAGGATTCCGAAGCAGCTGCCTCCTGA GCTGTTTGGATGTCCAGCTGGTTTTAATGCACGGTGGTTGGATGTTGCTTGTGGTCGTGAGCATACCGCAGCAATTGCTTCCGATGGCTCACTTTTTACA TGGGGGGCTAATGACTATGGTCAATTGGGTGATGGAACTGAGGAGCGAAGGAAACATCCGAAGAAAGTAAAACAACTAGGGTCGGAGTTTGTAAAATCTG TGTCCTGTGGAGCACATTGTTCTGCTTGCATTGCAGAACCTCGTGACAATGATGGTACTGTATCTACTGGGAGGCTCTGGGTTTGGGGACAAAATCAGGG ATCAAATTTTCCTAGATTGTTCTGGGGGGCCTTCGAACCTAACACGGTTATTCATCAAGTGTCATGTGGAGCTGCCCATGTGGTTGCTTTGTCTGAGGCG GGCCTTCTACAAGCTTGGGGATACAATGAGTGTGGCCAACTTGGCCGAGGTGTTACTTGTGAAGGACTTCAGGGGGCTCGTATTTTAAGTTCTTATGCTA AGTTCCTTGATGAAGCCCCCGAGCTTGTGAAGATTACCAAAGTGTCATGTGGGGAATACCACACAGCAGCCATTTCTGATAAGGGCGAGGTTTACACATG GGGGCTCGGAAATATGGGTCAACTTGGCCATTCTTCACTCCAGTATGGGGATAAGGAGCTTCTCCCGAGGAGGGTGGTTTCCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49399; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_20392
| Blastp | Probable E3 ubiquitin-protein ligase HERC3 from Homo with 33.21% of identity |
|---|---|
| Blastx | Probable E3 ubiquitin-protein ligase HERC3 from Homo with 33.21% of identity |
| Eggnog | ubiquitin protein ligase(COG5021) |
| Kegg | Link to kegg annotations (8916) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456545.1) |
| Pfam | Regulator of chromosome condensation (RCC1) repeat (PF00415.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |