| Id Trinity | FTRINITY_DN55207_c1_g5_i4 |
|---|---|
| Name Transcript | Ll_transcript_137571 |
| Sequence | CTGTATATAAAATAAAATAATAATTGGGATTTGGGAGGTGTGTTTCCCGCCCAATCCCGCCAAAAAGGAAGAGTAGAAAAGCCATTGTTTGAGTGAAAGA AGAGAGAAAGGAGAGAGAATGGAAGGAAAAGGAACAGCAACAGCAACGGGTTGTTACAAGTGCGGTAAACCAGGTCATTGGTCCCGTGATTGCCCCTTCT CTCCTAACCCTAACCCTAACAATCCTAACCCTATTTCGAACAATCCTAACCCTATTTCGAACAATCCTTCTTCTTCTTCTCTTCCTTCTTCCGAGAAGCC GAAGAAGCTTCCCAGAACTAGGCCCAAACTTACCCCCGATCTTCTCCTCTCCGACGATGGTTTCGGTTACGTTCTTCGCCATTTCCCTTCCCACTTCAAA TATCGCGGTCGTGGCCACGAGGTTTCCGATCTCGGTAATCTCCTTCACTTATACTCTGATTGGCACTCTCGCCTCCTCCCTTATTACTCTTTCCCTCAAT TCGTTTCTAAACTCCAGAAAGTTGCCGCCACTAGGCGCATCAAGACTTGCCTTAGAGAATTGAGAGAAAGAGTTGCGGATGGTGGAGATCCAACGAAAAT GCGTGAACCACCGCTCTTCGATGACATTCTACCGGATCAACAAGGAGATGTGGAAGCAGGTCAACAAGGGGGCGATGTGTTTTCAGAATTCCAAAATGTT GATGACGTTCAAGACATTCAAGAAGACATGCTTAATGATATATATGATACAGCTACTGAAGTAAGTAATGTCTTTAAAACTGAGTTTCTTTATTATTGTG TAATATCTTCTATGTACTTATGATAACACATTTGAAAGGAACTCTGTCCATATTTATCTGAAGCTATCATGGTGAAACAGATATAAAATTATCATTCAAG GATACTGGTTATCTGAAAATTTTGTGAAGATTGTGTATAATCTGATTTTTTGGAAAGAGTTTATCTCAGGTTTAGTTAACCTTATCCAATAACACACTGA AAATGGGAGAATAGTGATACATGAGTGCTTGTCTGCTAGAGTATACAACTTCATGCTCTTGAATGGTTTCATTTTTCATAGACTACTATACTACATGTGG TTTATATTCTTAGACAATTTTCGTTTAATGATAACTGTTTTGAAATCTCTAGTTATGTTCCTCGAGGGTGAGAACTTATCAGTGGCCCATGCTTCGTGTC TTCCTTCAATAGATCAGCTGCATACTAAATTTTGTGCGAACGCTAAGTGCCAATTTTTGGAAGGTGCTGAACCCATTGATATAGTTGCATGCTTGCTCTT AGAAGGGATAGAAAGTTGTTGGCTGTTGAAAGGAGATTCAGAGTTTGGGTTTGTTTATATTTTTATTCTATGCAACACTTTATTTGCAAATGATTTACAA GTGCTTTGAATCTCTTTGTTTTTGGTTAAGTTATTGAACTCAGTTTTATTCTTTGCTCGCCATCTCGGCTTAGTTCAAAATAAATTCCAACGCTGGTTTA ATGGTTTCAAGAATAGTCCAGTTTGCAAACTTAACTGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49451; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_137571
| Blastp | TIMELESS-interacting protein from Gallus with 33.33% of identity |
|---|---|
| Blastx | TIMELESS-interacting protein from Gallus with 33.78% of identity |
| Eggnog | Forms a fork protection complex (FPC) with tof1 and which is required for chromosome segregation during meiosis and DNA damage repair. FPC coordinates leading and lagging strand synthesis and moves with the replication fork. FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity)(ENOG4111VXN) |
| Kegg | Link to kegg annotations (415548) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451182.1) |
| Pfam | Zinc knuckle (PF13917.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |