| Id Trinity | FTRINITY_DN55210_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_138164 |
| Sequence | AATCGGGATAGGGCAAAACTTAAAACTAAAACTCTCTTTCTTCCCCAATCAATCTTAAAAGGGTTGAGAGGGTTGAATCTTGTACCCTTGTTTCTACCCA AACGGTGCAATTCTTATTAACAACCATGGCTTCGTGGAAAGACGCAGACCCTTCCCTAGGGTACCTTACCCGTAAGGACACGGAGGTGAAGCTTCCACGA GCAACTAGGGTTAAAAACAAAACCCCCGCTCCTGTTCAAATCACCGCCGAGCAGATTCTTCGTGAGGCACGTGAGCGTCAAGAATCTGAGATTCGCCCTC CCAAACAGAAGATCACCGATCCCACCGAACTCGGCGAGTATCGTCTCCGAAAGCGGAAGGAATTCGAAGACTTAATTCGCCGAGTTCGATGGAACATAGG GGTTTGGATCAAGTACGCTCAGTGGGAAGAGTCGCAGAAGGATTTCAAACGCGCTCGATCCATTTGGGAACGAGCGTTGGAAGTTGATTATAAGAATCAT ACGTTATGGCTCAAGTATGCTGAGGTGGAGATGAAGAATAAGTTTGTTAATCATGCTAGGAATGTGTGGGACCGAGCGGTTACGCTATTGCCCAGGGTTG ATCAGTTATGGTATAAGTACATTCATATGGAGGAGATGTTGGGAAATGTGGCCGGTGCGAGGCAAGTTTTCGAGAGATGGATGAAGTGGATGCCTGATCA GCAGGGTTGGTTGTCTTATATTAAGTTTGAACTTAGGTACAATGAGGTCGAGCGCGGAAGAGGAATTTTTGAGAGATTTGTACAATGCCATCCCCGTGTT GGTGCTTGGATTCGGTATGCTAAGTTTGAGATGAAGAATGGTGAGGTTGTGAAGGCACGGAATGTTTATGAGAAAGCATTGGAGAAGCTCGCAGATGACG AGGAAGCAGAGCTGTTATTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACGGAGCGTGCAAGAGCTATATATAAATTTGCACTTGATCATAT TCCCAAGGGACGGGCCGAAGATTTGTATCGCAAGTTTGTAGCCTTTGAGAAGCAGTATGGGGACAGGGAAGGGATCGAGGATGCTATTGTTGGGAAGAGA AGGTTTCAGTATGAGGATGAAGTGGGAAAAAGTCCAACGAATTATGATTCATGGTTTGACTATATAAGATTGGAAGAGAGTGTGGGGAATAAAGAAAGGG TAAGGGAGGTTTATGAGAGAGCTATAGCCAATGTTCCTCCGGCTCAGGAGAAGCGGTTATGGCAGCGCTATATCTATTTGTGGATTAACTATGCACTCTA TGAAGAGCTTGATGCTGGAGATATGGAGCGAACTAGAGATGTATACAGGGAGTGTCTCAATCTGATACCTCACCAGAAGTTCTCATTTGCGAAAATATGG CTACTAGCAGCCCAGTTTGAAATACGCCAGCTGAATCTCAAGGCTGCCCGTCAAATATTAGGAAATGCCATTGGGAAGGCTCCTAAAGATAAGATTTTTA AGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATCGATGTAGAAAACTGTATGAAAAGCATCTTGAGTGGTCGCCTGAAAATTGCTATGCTTG GAGCAAGTATGCAGAATTAGAGAGATCTTTAGCTGAGACGGGTCGAGCTAGAGCAATATTTGAAGTTGCAATCGCCCAACCAGCATTGGACATGCCTGAG CTATTGTGGAAGGCATACATTGACTTTGAGACTGGTGAGGGTGAATTTGATAAAGCAAGAGCACTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGA AGGTATGGATGAGCTTTGCAGAGTTTGAGGCAACGGCTATTAATAAGGACGATTTAGACGTAACAGAAGAAGCACTTGAACAAAAGAAGCAATGCATTCA GCGTGCCAGAAGGGTGTTTGAGGAAGCTCTCAAATACTTTAGATCGTCAGCTTCAGATTTGAAAGAGGAAAGAGCAATGTTATTGGAGAAATGGCTCAAC ATGGAGGCAGCTGAGTTTGGGGAGCTGGGTGATGTTAGCTTAGTACAGTCTAAGTTGCCGAAGAAGCTCAAGAAGAGAAGGCATGTTACTACCGAAGATG GATCTACCAGAATTGAAGAATACATCGACTATTTATTCCCCGATGAAACTCAGACAACAAATCTAAAGATCTTGGAAGCTGCATACAAATGGAAGAAGCA AAAATTGTCTTCTGGTGATGATTAGCTGTAGCTCCCATGCTTCTAGCATTTATACATGTGCAACATTTGTTGTTTCTTCTTTAACTAGCAAAAATTGGAG CTCCATCGGGTAAGTTGTTTCTGGGCCTTCAACATTTGCTGTAGAGAACCTCACGGAGTAACTTCTACTTTCTTAAAAATTGTAATTCAAAAAGGAGAAA GTCATCTCTTTTGAGTTATGTTAGTTAGTTAGTTAGTTAGTTTTGTTTTAGGGTAATGGAAGGAAAAGGAAAAGGAAATGATACTCTCATCAAAAGCCAA TTGTTGGGTGCATATATTACGAGTTTATAACTACTGCATTACAATGTTGCATGCTTAGAAACGTAAGTTAATTTACCTTTTGGCCAATATACGTTACTTA ATATAAAATGCATTTATCCATTCTTTTCTTTTCACTTGCCATGTTATTATACCAAAAAATGTTGACCCGTCCCTTAAATATCTCTATTTGCCCAGTACTT AACTATCAACAATATGAACAGCACATATGGTGTTAATGGTCAAGATATGCTTGACGTGAACAATATTATAAAGAGTATCCTTTATTAACTAATGTGGTTG ATCTTCACCAACCATCACAGAAAAGTCAGCACACGTCGCCCTCTCTCTCTTTCCACCTATTAAGTTTTACGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49478; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_138164
| Blastp | Crooked neck-like protein 1 from Homo with 60.44% of identity |
|---|---|
| Blastx | Crooked neck-like protein 1 from Homo with 60.44% of identity |
| Eggnog | crooked neck pre-mRNA splicing factor-like 1 (Drosophila)(ENOG410XQJF) |
| Kegg | Link to kegg annotations (51340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420965.1) |
| Pfam | HAT (Half-A-TPR) repeat (PF02184.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |