| Id Trinity | FTRINITY_DN55210_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_138165 |
| Sequence | GTGCACAGGTTTTAAACTGTTTAATTTATTCAATTTTCATCACCTTTTCCTTGTTCCTGAAATCTTATTAGGGTTTGGGTTAGGATAAAGAATCGCAAGG TTAACCATGTCTTCTTCGTTGAAAGACGCAGACCCCAACCTGGGTTACCTTACCCGCAAGGACACGGAGGTGAAACTTCCCCGTCCGACGAGGGTCAAAA ACAAAACCCCCGCACCTGTTCAAATCACGGCGGAGCAGATTCTCCGGGAAGCTCGTGAGCGTCAAGAGGCTGAGATTCGCCCTCCGAAGCAGAAGATCAC TGACCCCACCGAGCTCGGCGAGTATCGCCTCCGTAAGCGTAAGGAGTTTGAAGACTTAATCCGCCGCGTTCGATGGAACGTTGGTGTTTGGATCAAGTAT GCACAGTGGGAAGAGTCACAGAAGGATTTCAAACGCGCTCGCTCCATTTGGGAACGAGCTCTGGAGGTTGATTACAAGAACCATACCTTGTGGCTCAAGT ATGCTGAGGTTGAGATGAAGAACAAGTTCATTAATCATGCTAGGAATGTGTGGGACCGAGCGGTTACCCTTTTGCCTCGGGTTGATCAGTTATGGTATAA GTACATTCACATGGAGGAGATGCTCGGCAATGTGGCCGGTGCGCGGCAAGTTTTCGAGAGATGGATGAAGTGGATGCCTGATCAGCAGGGGTGGTTGTCT TATATCAAGTTTGAACTTAGGTATAATGAGGTTGAGCGTGCTAGAGGGATATTCGAGCGATTTGTGCAGTGCCATCCTCGTGTTGGAGCTTGGATTCGTT ATGCTAAGTTTGAGATGAAGAATGGTGAGGTTGTTAAGGCGAGGAATGTTTATGAGAAAGCGTTGGAGAAGCTCGCTGATGATGAGGAAGCAGAGCAATT ATTTGTTGCCTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACGGAGCGTGCAAGGGCTATATACAAATTTGCCCTTGATCATATTCCCAAGGGGAGGGCA GAAGATTTGTATCGTAAATTTGTGGCGTTTGAGAAGCAATATGGAGACAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAGG ATGAAGTGGGAAAAAGTCCAACGAATTATGATTCATGGTTTGACTATATAAGATTGGAAGAGAGCGTGGGAAATAAAGAAAGAGTAAGGGAGGTTTATGA GAGAGCTATAGCCAATGTTCCTCCGGCTCAGGAGAAGCGGTTATGGCAACGCTATATTTATTTGTGGATTAATTATGCACTATATGAAGAGCTTGATGCT GGAGACATGGAGCGAACAAGAGATGTATACAGGGAGTGTCTGAGTCTGATACCTCACCAGAAGTTTTCATTTGCAAAAATATGGTTACTTGCAGCCCAAT TTGAAATACGCCAGCTGAATCTCAAGGCTGCCCGTCAAATATTAGGAAATGCCATTGGGAAGGCTCCTAAAGATAAGATTTTTAAGAAGTATATAGAGAT AGAACTGCAGCTTGGTAATATAGATCGATGTAGAAAACTGTATGAAAAGCATCTTGAGTGGTCGCCTGAAAATTGCTATGCTTGGAGCAAGTATGCAGAA TTAGAGAGATCTTTAGCTGAGACGGGTCGAGCTAGAGCAATATTTGAAGTTGCAATCGCCCAACCAGCATTGGACATGCCTGAGCTATTGTGGAAGGCAT ACATTGACTTTGAGACTGGTGAGGGTGAATTTGATAAAGCAAGAGCACTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGATGAGCTT TGCAGAGTTTGAGGCAACGGCTATTAATAAGGACGATTTAGACGTAACAGAAGAAGCACTTGAACAAAAGAAGCAATGCATTCAGCGTGCCAGAAGTACG TGATCCCGATGTTATGCTTGGATTTTATTTATGATTGTTCAGTTTTAGTTTGGACTGAAATGGAATAAAAAAAATTATTCCCGATGTTATGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49478; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_138165
| Blastp | Crooked neck-like protein 1 from Homo with 63.41% of identity |
|---|---|
| Blastx | Crooked neck-like protein 1 from Rattus with 62.72% of identity |
| Eggnog | crooked neck pre-mRNA splicing factor-like 1 (Drosophila)(ENOG410XQJF) |
| Kegg | Link to kegg annotations (51340) |
| CantataDB | - |
| Mirbase | ath-MIR5641 (MI0019214) |
| Ncbi protein | Link to NCBI protein (XP_019420965.1) |
| Pfam | HAT (Half-A-TPR) repeat (PF02184.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |