| Id Trinity | FTRINITY_DN55217_c4_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_139494 |
| Sequence | GCTGGTGCATGGTAGTGTGCTGTGTAGGGTTTTGTAGCATCCACCTTTCACTGACACACCTCTTTACTGCACCACTCTGAAACAAAACTCTCTTTTCTTC TCTACTCTATGATCACACATTAAGTTCTTCATAATTATGGCGGAGAATGTAATGATCCAAACGGAAACACTGAATTCCTCGAATCACTCATCCATTTCCG TTTCCCTCAACCAGAGAATCGACTTTCTTTCTGCTAAGATTCCTTCTAAGCAATTTTCTAATGATTTTTATCTCGAAACCCTAAATCCTACCACTAACTC TGTTCACTCGGTTCCTGCTTCTTCCGGTAAGAAGCACAATGCTTCTGAGGTATCGGAGTATGGTTTGGATCCTGAGCTTAGCTTTGGTATAACTGTTCCA AAAATTGCTCAGTTAACGGGGCACTATTCTTATTTCAGGGAGCTGGATTGCGAAATCTTGGAAACACTTGTTTTCTCAACTCAGTAATACAGTGTTTGAC ATATACGGAGCCTCTAGCTGCATATTTGCAAAGTGGCAAGCATAAAACTTCATGCCGCGTTGCTGGATTTTGTGCTCTGTGTGCAATACAGAATCACGTG AGCCGTGCACTGCAATCAACTGGGAGAATTTTATCCCCAGAGCATCTGGTTGGGAATCTGCGGTGCATTTCACGAAATTTCCGAAATGCGAGGCAGGAGG ATGCTCATGAGTATATGGTGAACTTACTCGAGTCTATGCATAAATGTTGCCTGCCTTCTGGAATACCAAGTGAATCGAATGGTGCTTATGAGAAAAGTTT GGTTCATAAGATTTTTGGTGGCCGTCTCCGCAGTCAGGTGAAATGCCAGCAATGTAATTATTCCTCCAACAAGTTTGATCCATTCTTAGATTTAAGCCTT GAAATATTCAAGGCTGATTCATTGCAAAAAGCACTTGCAAATTTCACTGCCGCAGAGTTGTTGGATGGAGGGGAGAGGCAATACCAGTGTCAAAAATGCA AGCAGAAAGTTAGGGCTCTCAAACAGCTTACAATTCATAAGGCACCTTATGTGCTCATGATTCATCTAAAGCGGTTCTTTGCACACGATCCTGGACTAAA GATTAAAAAGAAGGTTCATTTTGGATGCACATTAGACTTGAAGCCATATGTCAGTGGGTCATATGATGGAGATGTGAAGTACTCACTCTACGGGGTTCTG GTTCATTCTGGTTCTAGTACTCATTCTGGCCACTATTACTGCTATGTGCGCACTTCAAATAACATGTGGTATACCTTGGATGACAATCGGGTAAGTCATG TCAGTGAGCGGGAAGTTCTGAATCAGCAAGCATACATGTTGTTTTATGTACGTGATAGAAAAGGTACTGTTCCAAGGAAGCCTATTGACATTGCAAAGCA AGAGAATATGAAGTTGAATGTGAATGCAAATAGAGATTCTTCAACTTCAAACCAAGTATTGAAGGAAGTTACAAATGGTCCAAGGGAAAATAAATCTTGT GAATCATGTTTGATTACTGAGCCTAAAAATATGTCACATGCTGGATCAAGCAGGGTTCCCTTTATGAAGAATGCTATAGTTCAGCAAAAAAATAACCTCA TATTACCAGAAAGCTTGGTGCAAAGTGAAAAACTTGTATCTGGACTGTCGTCCCAGCTACAGCCACAGAAGGGCTCACAAGAAGGGTCCCCTCTTTCCAC AGTGCCGGCCAATAATCCCCAGACCTCCACAGATAAACAGATTACTGATGGAGCATCTCAACCTCAGAAGAATGATTTTGTCACCAAAGCTGATATGGCT GCACCTCAAGCATTGAAGCACAAATATGTCAGATGACAGTGGCCTTGTGACTTCACTAATCAACAAAACAACATCGTCGTTCAATTTTTTACACTATCCC AATCGTGTGCTGAGCTTACCTTTGTTTTAAGCCTAACTGTTTTGACTTATTGGCTTTACCTTTTTATTTTTAGGTTGGAGCTTCTGCAACTGGTTCAGCA TGTGATGAAGCAGGTAGTAAGGTGTGTGATAGTGCTGTTGGTTGCCAAACACTGGTTCTTCACAAGTCTAATCTTAGTGAAAAGCACCTGAAAAAATCAA GAAAGAAGTTTATGAAGTATAATGTCTCAAGCATATACTTCCGCTCAACTTACCTTTTCCTGGCATACTTGGGTTCACGAAAGAAGAATCACAAAAGAAG TAAACACCAGTGGCTGGGTGTGAAGAATCCAAATAAAGAGAAGCTGGATAAACATGCTCTCTCATCAGATGGACCATGTACATCTGGAAAAGCTGCTATA TTCCCCTCCGCGTCATGTTTTGATAGTAGGACAACCAAGGCTGGTGATAGACCTGATGCTAAACTTAAATTGAATGACAAATCTCTCATAGAAAATACCG CTGAAGAAGGATTTAGGAAGAGAATTGATATGAACTGTACTGTGCTTGCAACAGCTATGCAAGTAGAAAATATATCTGGGCGTGGTTCAGGAGTAAACCA ATTTGAAACTAGACAATCTGATAGTCTCAAAGATGGTAAAAGAGACCAAATGCATAATAATTTAACGAGTATGATTACCCGAGGTCTGGAAGAGACAGTT GTTGCAAGTTGGGATGATATAGAATTGCCTCAACGTCATTTCTTAGAGTCTAGCAATGACAAGATTGCCAGCATTGGATATGTGGGGGATGAATGGGATG AGGATTATGACAAGGGGAAGAGGAAGAAGTTGAGGGGCGACAAGGAAAGCTTCGGTGGGCCAAATCGTTTCCAAGAAATTGCTACCGAGAAATGTAGGTC TAAAAGGGCTAAGTTGGACCGATCTAACTCAGGGAACACTCCTTTTAGGATATGAAGTCCAAATCTTTGTTCCCTTCAAAGTCTGGGGGCTTCTTGAAGC ATCATCTATTTGGCCTCAGAGTACCTACATTATTCCTTTTTGCTGTATAAAATTTTGTTTGCAGGATTAAATTATTGTCTTTAGGGGCAGAGCAGCAGAG GGTTGGGTTTCTATGTATGTGTTCCTGTAGTAGTAAGCTGCATGTCATAGCCTATAAATTTTGTTCCTCATATTTATAAATATTCGGTACATAATGTTGC AAAACGTCTCTATCTTTGTTGTACTGGAGTTGGATTACGTATTTGGTGTGTTAGGTTAGCCATGAAAAAAGATTCTTAAGAATAATGTGTATAATTTGTT CATGTTCTGTTTGGTTCTTATGAATAGATTTGGTGTTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49544; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_139494
| Blastp | Ubiquitin carboxyl-terminal hydrolase 23 from Arabidopsis with 60.95% of identity |
|---|---|
| Blastx | Ubiquitin carboxyl-terminal hydrolase 23 from Arabidopsis with 65.03% of identity |
| Eggnog | ubiquitin carboxyl-terminal hydrolase(ENOG410XQ92) |
| Kegg | Link to kegg annotations (AT5G57990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441462.1) |
| Pfam | Ubiquitin carboxyl-terminal hydrolase (PF13423.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |