| Id Trinity | FTRINITY_DN55219_c0_g3_i14 |
|---|---|
| Name Transcript | Ll_transcript_138135 |
| Sequence | ATTTTTCTGAGATGGCCAAGGTTCAAAGATTCTGTTCTTTCTCACAACTGAACTATGTGCTATTTATCTGCATGCTTTGCTTGATGTGAAGTGAAGAACA AATCAAATCTAATGAGCTGAACCCATTTCCCACACTCTCTTCCATTTTCCACTTCTCATTTTATTTCTCTCATTCAACCAAGTCCCTTCACAGAAAGTTT GAAACTCCAAAACCCTTTTATGCAAACCAAATCTTAAGTGCCCAGATAGATTCACCACCACCCTTTTCTAAAGCCAAGTTCTTTCTCAGATAACTTGATT TAACTGTTGAAATATGTCAGTTATTCCGATTTCGCTGAGCCATCTATCAGTACAGCTGTGAAAGTTAAAAGAAAAGGTGAATCACCTATTGGTTATTCTG ATGCATTACCTAATGTTGTATGGGCTCCTGCATCAGCAGTCAAGAGATTTTAGTTTACCACTTATTGCTATTCCTATCTTTTGTCCACTCAAATAAGCAT TTCTAATCTGTCCTGTTTGACATGATTTCTCTACTTGTAGCTCAGTTGTAATTAAAATAACACACTCTCTCATCAAGACACTCTATCCCACCCTTGGTGG GAAGACGCGTGCAACTATGTACAACACAAATTTCAGCTCAACGATATATGCGGTTAGGTGTAAAGAGACATTTACTTTATCTTCCAATGGCTACACAAAT TTCTCGTATGAAAGATTTGATAGAAACCCATCACATTGTTCATCATGTTGTGGTTGTTGTGATTGCTGTTCATTCTCCACTTACAAAGTGCCTGTAAAGT CCAGTCTTCTGAATGGGCTGAAGCAATCTACTCTCCTTCAACTTTCAGCTTCTAGAAGGTTGATTTTGGGTGGTGGAGACCTGTACTTTTCCCGACTACC ATCTTTTGATCTCCATAGAGGTTGTTCTGAGCTTAACTATTCTGTTCACGAGATAACTGTTTGCAATAGAAGTACAAGGAGAACAAAGGGAAGATGTTTG TGTACGGCTCCACGAAAAGGAAGGGAAATATGCCACACAATTGATTCTGATGATGTTGAATCAGTTCTCAGCTTATTGAGTGAAGAAGCAGATAAGGATT CTAGCAGTATCAAATTGAAGAGCGTGTCTTCACCCAAAATAATGGAAGCAGAGAAGAAAAGAAAAAATGTGATCAAAGAGAGAAATTTGAGTTTAAGTAA GAAAGTAGAAGCAAAGAAGAAAGGAAATTTGAAGCTACATGAGACATCCACTATAGACTTGAGAAGCGAGAATGAAAAACCCTGCAAAGAAAGGGAAACC TTCAATAAAAGTGAGAACCATAGGAAGCGAAGAGATGTTTCTAGTTGCTCATCTTATTACTCACTTTCATCAGGAGATCTTGCAAGTGACCTGGAAGTTC AATATAAGCATGATTTGGAAGAATTATCAGTAGTATATGAGAAAGATTGTGCAAATCACGAGGGACAAGTAAAGGATGAACTGAACAGGCAAAGAAATTA CTCACAGAAGCTGCATTATGTTCCAAATCAGGAAAGGACTGCATTTAGTGCTAATAATATTGATTGGAACCTAAGGAAGAAGTCTGAAAAGAAACCGACT GACATGACTATGCAAGAAACATTATCCACAAAAGAACACAAAGATAAGCATTCAAGAGCATTTCGAACTCATGAATCTAGTTATGGAAATACATCTATTT CACGCAAGCAAGTCGAATGTGAGGAAGATAATTTATCTTTTGTCAAGGATTTGGATAAGAAAATGGAAAAGGCATATATTAAAGCAAGGGGGAAAAGAAA TCACCAATCTACAGATACACAAGAGTCTGGTTATGATGAAGTTGAAACAACTTTGGCTTCAAAGAAGACATTCAGTGGCAGGGAAGGGAACCATGAGATA TCAGAAACATTGTTACGTGAAAGAAGTGATGAACATAAAAAGTTTGTTGGATCTAATTCTACCACAGGAAAGGAAACTTCAGAATCAAAGAGGACATTCA GTGGCAGGGAAGAGAATCCTGAGATATCTGAAACACTTTTACACGAAACATGCGAGGAACGTAAAAAAATTGTTGGTACTACTTCTACCATTGGAAATAA TGTAATAAATAGGAATTCCCAGAAATATATGGGAAAAACAAAAGTTGAGGACACTGATAGAAACTTAAATACTCGAATGAAGAATTTGGCAGAGGAAAAA GTTACAATTTTGAGTTCTGTTCAGGGAGTAAAGGAGCAACAACACCAAAAAGGAGAAAAGATCGTTGCACAGGCTAAAGAGAGCAGAAAGCCTCAGCGAT TTTCTGAAGTATCACAAGTTCATGAGAGTAATGTAGACGATACATCCATTGTGACATCCAGAACTAGAATAAATGACTGGGGAGGGAATTCAAACTCAAG CACAGCTGCCAGGGGTACATGGCACCAAATAGATGATAGGACAAATCAGAGTATTCAACACGGGAAAGGGTTTGAACATGTCAGCACCTTATCAGAAGGG TATGCCAGTGATGAAAAGCAAGTTTCCAGTTCTCAAAGAATTTCTGGGAAGGTGAGGTTCATCCCAAAAAGTAAATCAATGTCAGTTGTTAAAACCAGAG AGAGCTATTGCCAAACTGATGAAAGGATTACAAATTTTGACTTGTACAGTGAGGGCCAAAGACCAATGATCCTAGCAGTTTCTGATGAAACTGTCTCAAG AGAGGAAGCCAACTTCCATGGATCGTTGAATTTGGTTTCCGAGGCTGGAAAACGTGTTAGATTGGCATCAGGGGACGAACAGAGTTCAGAAGGAATGCTG ACCCCTTCCTCATCCAGATTGATGGGTCGAAGCTCAGTACATGTTGAACTCAATGCTGAAATTGAAAATCCTGGGATCATCATTGAAAGTTCAGATAGTG GCTCATCTGCTATGTATGACAGTGCCAGAAGAAATCCCATTTTTCTTTCTGGATCATACTCTACAGATGGAATTCATCAGGCCTATAGTGAACCTTCTAA CATCATAGATCTGGAAGGTGGTGCCCTTGGTTCAGCTGATCGTTTAGAGAAATCATCCAAACAGTTTGTTGATGAGTTTGTTGAGAGAGTCCGGCATGAA GTCACCACTTCAGAAACACGAGAGCCAGATGTTACTGGAAAAAGGTTGACCATTGAAGATGAAGGAAATCAGATCTTTAGTTCAAGGCAAGAAGGCACTC AAAATGAGTCACAGTTGAAGGAGCGTGGTTCTAGCCATTCCTCTGGGTTTCCTGGGACCAAAGGACCTTCTGATGAAATGTGGGATGTAAATGAACCATA TGTTGAGCAAAGTCTTATAGCTGAAGAACCAGAGATCGGCAAGGAAACTGAGAAAACAATTCTCAGTAGAACTGGGAGGTCCATGTGGAGTATGATTGCA GATGTTGTTCGATTACGTTGGGGCTCACGTACTGGTTCCTCCACTTCAGTTGGAAGATCAGGTGAGAGAAACTCGCCAAACAAGTCTGATACTGAGACAT GGTTTTCAGGGCAGGAGCATGAGGAAACTAGTAAGAGTAATGTAATAAAGGAAACAAGTGTACTACCACAGACCATGACTTCATCAAAGCCAATTACATC TTATACCCAAAGTGACGGAGACGTGTCTGACACTAAAAGACTGAAGGACAATGGAAAAAATCTTGAAGTTAGATCATCTTCTCCAAATGCATTGGAAAGT GGATCAACATCATTAGGTGCCTCATATGCTTCTGGTGAGGAACATGCTAACTGGAGTGAAGATGGAAAAGATTTGAAAGTCAGTACTTCAGACATAAAAA ATGTGGAATTCCCAATTCCGTTGCCTGCCAGAGGGCCTCCTTTTGTTGGGAAAATTGTAAATGTTGGTGGATCTGACATATCTGGAAGTGAGCCGATTGT GCCAATCAAAGAACCTGTTGCTGCAGTGCAATTTGAATCGTCTGGCTTAGGGGAAAAGGATGGAGAGTTGAAGCAAAGGAAGTTTCAACGGAACACTCAA GTATTGAGAGATAGGTTTGATGATTGGGAAGAAGCCTACAATGCTGAATTTGAGCAGCGGAGAGTGGATGAAATGTTCATGAAGGAGGCACTTTCGGAAG CTATGAAAGCTGCTGATACATGGGAGGTCCCTGTTGGTGCAGTTCTTGTGCAGAATGGAAAAGTTATTGCACGGGGATGCAACTTAGTAGAAGAGTTACG GGACTCCACTGCTCATGCAGAGATGATTTGTATCCGAGAAGCTTCAGGTCTTCTTCGAACATGGAGACTATCAGACACTACACTATACGTCACGCTTGAG CCCTGTCCTATGTGTGCCGGAGCCATTCTTCAGGCAAGAATAGATACTGTTGTGTGGGGAGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTA GGCTTTTCCCTGATGGAGGAGAAAGTTCATCTGAACCAAGAAATATACCACCTGCCCCAGTTCATCCATTCCATCCAAAGATAAAGATAAGAAGAGGAGT CTTGGCCTCGGAATGCGCAGACGCAATGCAGCAATTCTTTCAGCTGAGAAGGAAAAAGAAGAAAGAAGAATCGTCAAATGACCAATCTTCCCTTCCTATT ACTCACCACCACCCCTCCAAGTTTCTTAACAAGATTCATGACATCTTTCATGTAATGTTTTGTTTGTAAAATAAAATTACAGACACACATTTTCCTCATG TTTTAAATGAGCAACTGAATGAAACTTTCAAACATGATGTATGGTCTTAGTGAAAGGCACAATGTTCAATTTCTAACGTTATATTCATTCAGCAAAGTTG TACTGAACAATAACTTAGACGTTTCTATACCAACCATTGTTGTCAACTTTAACTTCACGTTACAGCTTTGAAAGTTTCTTTAGTAGGTATTGTAGGAATA ACATTATTTGTACTATTATCTATATCAATTCTCTATGTCACTCCTTTTATTTTATTTTTACTTTGTTACAGGTGAAACCAAACAGCAGAAACAAGAAACA AAATAAGCAAAAGCTGCATAACGAGGATGCAATATGATAATCTGCACAGACATTTGCTTCACCAAGAACATAATGGACGTGCACATTCCAGTTTCTCTAT GACATTCCTTTGATTGGTTAAATAAAAATAAAATTATGCGATGTATATAATCTTTAAATTTTACTTTTTTGACTAATTAAACATTCCTTAAATTTTATTT GCTTGACTAATTAGGAGTTGCATAAAAGTGTTACTTGGTGAAGTTACATTGGAATGATGATAGACCATAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49557; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_138135
| Blastp | tRNA(adenine(34)) deaminase, chloroplastic from Arabidopsis with 35.71% of identity |
|---|---|
| Blastx | tRNA(adenine(34)) deaminase, chloroplastic from Arabidopsis with 35.02% of identity |
| Eggnog | deaminase(COG0590) |
| Kegg | Link to kegg annotations (AT1G68720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460745.1) |
| Pfam | Cytidine and deoxycytidylate deaminase zinc-binding region (PF00383.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |