Ll_transcript_138113

• Id Trinity: FTRINITY_DN55219_c0_g3_i2
• Name Transcript: Ll_transcript_138113
• Sequence: ATTTTTCTGAGATGGCCAAGGTTCAAAGATTCTGTTCTTTCTCACAACTGAACTATGTGCTATTTATCTGCATGCTTTGCTTGATGTGAAGTGAAGAACA AATCAAATCTAATGAGCTGAACCCATTTCCCACACTCTCTTCCATTTTCCACTTCTCATTTTATTTCTCTCATTCAACCAAGTCCCTTCACAGAAAGTTT GAAACTCCAAAACCCTTTTATGCAAACCAAATCTTAAGTGCCCAGATAGATTCACCACCACCCTTTTCTAAAGCCAAGTTCTTTCTCAGTTATTCCGATT TCGCTGAGCCATCTATCAGTACAGCTGTGAAAGTTAAAAGAAAAGCTCAGTTGTAATTAAAATAACACACTCTCTCATCAAGACACTCTATCCCACCCTT GGTGGGAAGACGCGTGCAACTATGTACAACACAAATTTCAGCTCAACGATATATGCGGTTAGGTGTAAAGAGACATTTACTTTATCTTCCAATGGCTACA CAAATTTCTCGTATGAAAGATTTGATAGAAACCCATCACATTGTTCATCATGTTGTGGTTGTTGTGATTGCTGTTCATTCTCCACTTACAAAGTGCCTGT AAAGTCCAGTCTTCTGAATGGGCTGAAGCAATCTACTCTCCTTCAACTTTCAGCTTCTAGAAGGTTGATTTTGGGTGGTGGAGACCTGTACTTTTCCCGA CTACCATCTTTTGATCTCCATAGAGGTTGTTCTGAGCTTAACTATTCTGTTCACGAGATAACTGTTTGCAATAGAAGTACAAGGAGAACAAAGGGAAGAT GTTTGTGTACGGCTCCACGAAAAGGAAGGGAAATATGCCACACAATTGATTCTGATGATGTTGAATCAGTTCTCAGCTTATTGAGTGAAGAAGCAGATAA GGATTCTAGCAGTATCAAATTGAAGAGCGTGTCTTCACCCAAAATAATGGAAGCAGAGAAGAAAAGAAAAAATGTGATCAAAGAGAGAAATTTGAGTTTA AGTAAGAAAGTAGAAGCAAAGAAGAAAGGAAATTTGAAGCTACATGAGACATCCACTATAGACTTGAGAAGCGAGAATGAAAAACCCTGCAAAGAAAGGG AAACCTTCAATAAAAGTGAGAACCATAGGAAGCGAAGAGATGTTTCTAGTTGCTCATCTTATTACTCACTTTCATCAGGAGATCTTGCAAGTGACCTGGA AGTTCAATATAAGCATGATTTGGAAGAATTATCAGTAGTATATGAGAAAGATTGTGCAAATCACGAGGGACAAGTAAAGGATGAACTGAACAGGCAAAGA AATTACTCACAGAAGCTGCATTATGTTCCAAATCAGGAAAGGACTGCATTTAGTGCTAATAATATTGATTGGAACCTAAGGAAGAAGTCTGAAAAGAAAC CGACTGACATGACTATGCAAGAAACATTATCCACAAAAGAACACAAAGATAAGCATTCAAGAGCATTTCGAACTCATGAATCTAGTTATGGAAATACATC TATTTCACGCAAGCAAGTCGAATGTGAGGAAGATAATTTATCTTTTGTCAAGGATTTGGATAAGAAAATGGAAAAGGCATATATTAAAGCAAGGGGGAAA AGAAATCACCAATCTACAGATACACAAGAGTCTGGTTATGATGAAGTTGAAACAACTTTGGCTTCAAAGAAGACATTCAGTGGCAGGGAAGGGAACCATG AGATATCAGAAACATTGTTACGTGAAAGAAGTGATGAACATAAAAAGTTTGTTGGATCTAATTCTACCACAGGAAAGGAAACTTCAGAATCAAAGAGGAC ATTCAGTGGCAGGGAAGAGAATCCTGAGATATCTGAAACACTTTTACACGAAACATGCGAGGAACGTAAAAAAATTGTTGGTACTACTTCTACCATTGGA AATAATGTAATAAATAGGAATTCCCAGAAATATATGGGAAAAACAAAAGTTGAGGACACTGATAGAAACTTAAATACTCGAATGAAGAATTTGGCAGAGG AAAAAGTTACAATTTTGAGTTCTGTTCAGGGAGTAAAGGAGCAACAACACCAAAAAGGAGAAAAGATCGTTGCACAGGCTAAAGAGAGCAGAAAGCCTCA GCGATTTTCTGAAGTATCACAAGTTCATGAGAGTAATGTAGACGATACATCCATTGTGACATCCAGAACTAGAATAAATGACTGGGGAGGGAATTCAAAC TCAAGCACAGCTGCCAGGGGTACATGGCACCAAATAGATGATAGGACAAATCAGAGTATTCAACACGGGAAAGGGTTTGAACATGTCAGCACCTTATCAG AAGGGTATGCCAGTGATGAAAAGCAAGTTTCCAGTTCTCAAAGAATTTCTGGGAAGGTGAGGTTCATCCCAAAAAGTAAATCAATGTCAGTTGTTAAAAC CAGAGAGAGCTATTGCCAAACTGATGAAAGGATTACAAATTTTGACTTGTACAGTGAGGGCCAAAGACCAATGATCCTAGCAGTTTCTGATGAAACTGTC TCAAGAGAGGAAGCCAACTTCCATGGATCGTTGAATTTGGTTTCCGAGGCTGGAAAACGTGTTAGATTGGCATCAGGGGACGAACAGAGTTCAGAAGGAA TGCTGACCCCTTCCTCATCCAGATTGATGGGTCGAAGCTCAGTACATGTTGAACTCAATGCTGAAATTGAAAATCCTGGGATCATCATTGAAAGTTCAGA TAGTGGCTCATCTGCTATGTATGACAGTGCCAGAAGAAATCCCATTTTTCTTTCTGGATCATACTCTACAGATGGAATTCATCAGGCCTATAGTGAACCT TCTAACATCATAGATCTGGAAGGTGGTGCCCTTGGTTCAGCTGATCGTTTAGAGAAATCATCCAAACAGTTTGTTGATGAGTTTGTTGAGAGAGTCCGGC ATGAAGTCACCACTTCAGAAACACGAGAGCCAGATGTTACTGGAAAAAGGTTGACCATTGAAGATGAAGGAAATCAGATCTTTAGTTCAAGGCAAGAAGG CACTCAAAATGAGTCACAGTTGAAGGAGCGTGGTTCTAGCCATTCCTCTGGGTTTCCTGGGACCAAAGGACCTTCTGATGAAATGTGGGATGTAAATGAA CCATATGTTGAGCAAAGTCTTATAGCTGAAGAACCAGAGATCGGCAAGGAAACTGAGAAAACAATTCTCAGTAGAACTGGGAGGTCCATGTGGAGTATGA TTGCAGATGTTGTTCGATTACGTTGGGGCTCACGTACTGGTTCCTCCACTTCAGTTGGAAGATCAGGTGAGAGAAACTCGCCAAACAAGTCTGATACTGA GACATGGTTTTCAGGGCAGGAGCATGAGGAAACTAGTAAGAGTAATGTAATAAAGGAAACAAGTGTACTACCACAGACCATGACTTCATCAAAGCCAATT ACATCTTATACCCAAAGTGACGGAGACGTGTCTGACACTAAAAGACTGAAGGACAATGGAAAAAATCTTGAAGTTAGATCATCTTCTCCAAATGCATTGG AAAGTGGATCAACATCATTAGGTGCCTCATATGCTTCTGGTGAGGAACATGCTAACTGGAGTGAAGATGGAAAAGATTTGAAAGTCAGTACTTCAGACAT AAAAAATGTGGAATTCCCAATTCCGTTGCCTGCCAGAGGGCCTCCTTTTGTTGGGAAAATTGTAAATGTTGGTGGATCTGACATATCTGGAAGTGAGCCG ATTGTGCCAATCAAAGAACCTGTTGCTGCAGTGCAATTTGAATCGTCTGGCTTAGGGGAAAAGGATGGAGAGTTGAAGCAAAGGAAGTTTCAACGGAACA CTCAAGTATTGAGAGATAGGTTTGATGATTGGGAAGAAGCCTACAATGCTGAATTTGAGCAGCGGAGAGTGGATGAAATGTTCATGAAGGAGGCACTTTC GGAAGCTATGAAAGCTGCTGATACATGGGAGGTCCCTGTTGGTGCAGTTCTTGTGCAGAATGGAAAAGTTATTGCACGGGGATGCAACTTAGTAGAAGAG TTACGGGACTCCACTGCTCATGCAGAGATGATTTGTATCCGAGAAGCTTCAGGTCTTCTTCGAACATGGAGACTATCAGACACTACACTATACGTCACGC TTGAGCCCTGTCCTATGTGTGCCGGAGCCATTCTTCAGGCAAGAATAGATACTGTTGTGTGGGGAGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTG GATTAGGCTTTTCCCTGATGGAGGAGAAAGTTCATCTGAACCAAGAAATATACCACCTGCCCCAGTTCATCCATTCCATCCAAAGATAAAGATAAGAAGA GGAGTCTTGGCCTCGGAATGCGCAGACGCAATGCAGCAATTCTTTCAGCTGAGAAGGAAAAAGAAGAAAGAAGAATCGTCAAATGACCAATCTTCCCTTC CTATTACTCACCACCACCCCTCCAAGTTTCTTAACAAGATTCATGACATCTTTCATGTAATGTTTTGTTTGTAAAATAAAATTACAGACACACATTTTCC TCATGTTTTAAATGAGCAACTGAATGAAACTTTCAAACATGATGTATGGTCTTAGTGAAAGGCACAATGTTCAATTTCTAACGTTATATTCATTCAGCAA AGTTGTACTGAACAATAACTTAGACGTTTCTATACCAACCATTGTTGTCAACTTTAACTTCACGTTACAGCTTTGAAAGTTTCTTTAGTAGGTATTGTAG GAATAACATTATTTGTACTATTATCTATATCAATTCTCTATGTCACTCCTTTTATTTTATTTTTACTTTGTTACAGGTGAAACCAAACAGCAGAAACAAG AAACAAAATAAGCAAAAGCTGCATAACGAGGATGCAATATGATAATCTGCACAGACATTTGCTTCACCAAGAACATAATGGACGTGCACATTCCAGTTTC TCTATGACATTCCTTTGATTGGTTAAATAAAAATAAAATTATGCGATGTATATAATCTTTAAATTTTACTTTTTTGACTAATTAAACATTCCTTAAATTT TATTTGCTTGACTAATTAGGAGTTGCATAAAAGTGTTACTTGGTGAAGTTACATTGGAATGATGATAGACCATAG
• Tissue: flowers
• Gene name: LI_gene_49557;
• Additional information: details;

Expression of Ll_transcript_138113

FPKM

• FPAB: 0.4
• FPNAB: 1.4
• LF1: 0.2
• LF2: 0.3
• LF3: 0.4
• LF4: 0.2
• UF1: 0
• UF2: 0.2
• UF3: 0
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_138113

• Blastp: tRNA(adenine(34)) deaminase, chloroplastic from Arabidopsis with 35.71% of identity
• Blastx: tRNA(adenine(34)) deaminase, chloroplastic from Arabidopsis with 35.02% of identity
• Eggnog: deaminase(COG0590)
• Kegg: Link to kegg annotations (AT1G68720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460745.1)
• Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region (PF00383.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;