Ll_transcript_138640

• Id Trinity: FTRINITY_DN55240_c0_g1_i6
• Name Transcript: Ll_transcript_138640
• Sequence: GGAGAAACAGCACGTGCAAGTTTGTTATAATAATATAATCACAAACAAAAAAACATTTATTCAAATCCTAGTACTTTCTTTGTCTTGCTTCATTACAAGG CCTACATTGTGTTATTAGGTTGATCTGCTGGTTTTGAACCAGATTTCAGTAATGATTCTTTCTGCTCTTTTAACTTCGGTTGCAATTAATCTTGGCCTGT GTTTTTTATTTTTCACCCTATATTCGATCTTGAGAAAGCAGCCCGGTAACATCACTGTATACGCGTCGCGCTTAGTTGTCGAAGGAAAAGTTAAAGAAGG TGGTGAGTTTAACTTGGAACGGTTGTTACCTACTGCTGGCTGGGTGAGAAAGGCGTGGGAGCCTTCGGAGGAAGAATTTTTGTCGAATTCAGGCTTAGAT GCTTTTGTCTTCATGCGCATATTTATCTTTAGTTTAAAAGCATTTGCTTTTGGTGGAATCATTGGGATGTTCGTTCTACTTCCGATCAATTATTCGGGGA GTCAGCTCGAAGATTATTCGGATTTTCAACACAAGTCTTTGGACTTGTTCACTATTGCTAATGTTAACAATGGTTCGAAAAGGTTATGGATCCATTTTTG TGCTGCATATGCTTTCACCGGAGTTGTCTGCTATCTTCTTTATTACGAGTATGGGTACATTTCATCAAAGAGAATTGCTTGCTTATATTCATCCAAGCCT CAGCTTCATCAGTTTACAATATTAGTTCGTGGTATACCCGTTCCACGTGGAAGGACATGTAACGATGTTGTTGAGCGCTTTTTCCAAGAGTATCACCCTT CCACATATCTTTCACATTCGGTGGTTCGTCGAAGCAGCAAACTTCAAAATTTTATTGTAAGCATTTTCTGTATCGCTGGAAGAGTATATCTCCTGAATAC GTACATATTATCTGTCAATTTTCGATTAAATAGAAGCTTTTTGTCCTGTTAAAGAAGTCATTAATAGTGAAGAAGTATAACAATGGAGGATGTAAAAGAA ACCAGAGAAAAAGGAAAGTAACTCGCGAGAGCAAACCAGTCTTACACAAAGAAACTCATGAGAGCTCTTATGAGCTCAATCGCCGTGTCCAACAAAACTA GCCTATCCCGTATGCTCTGGTCTTCTGCTCCGACGAATGCATCTCACCCACAATTTCAAAGCACCAAATTCATCTTGCTACTTCCAAGTTAGGAAAGCAT ATCCAATGTTCTTATTGCCTGAAAAACACAAATTACAATAAGTTATTCCATACATACGTAATTAGTTTCCTTCCCCATATAATGTAGGAAATTTTTATTT TACTCCCATGCCAATGATAGCATGGCATTATATAAGTATGTATCATGTTAGAATAAATACTGTTATGTCATGAATCTACAGTCTAACAAGTAACTTCAGT GTGGCATATTTTCGTACTGAATATTGAGAATCGTGTCTTGGAGATTGAAACCAATTCTATACGCATTAGGCAACAACTTAAGCTTTAAGGTCGACAACAT GTGCCCTATTTTTATAATACTTGAGTTGCTGTTGAGACCAGAATGGGTTGTTTTTAAGTGGGTTTATTAGATATGAATCATGTTTCCTCAGATAAACTGT AAAGTTTAAGGTTCATCGATGTTTTGTTAGGCTTTCCCAAAATAGTGTTCGTTTTCTTGCTTTGTTCTTTGTAGAATGATGCAGATAAACTGTACAAAAG ACTTGCCAATCTAAAAAGTAAAAAGGATGTTCCTCAAGGGCACATACGCGATGGCTTTTTGGGAGTTTTCGGGCCTAAAGTTGATATTTTAGATCACTAT GAAAGGAGATTGAGAAACATAGAAGATAATGTGAGAATAGAACAGTCTTATGTGGCAGCAAAGGATGTTCCTGCCGCCTTTGTCTCGTTTAAGACACGAT TTGGTGCTGCGATAGCTCTAAACATTCAAGAAAGTATCAATCCCACAGAATGGACTTGTGAGCAAGCTCCTGAGCCTCATGATGTTTATTGGCCTTTGTT TACCGTTTCATTCATTAGAAGATGGATCAGCAAGCTGGTGGTTTTTGTTGCTTGTGTTTATCTTACAGTTCTGTTTCTAATACCGGTCGCAATAGTACAA GGTCTTACCCATCTTGATCAATTGATAACCTGGTTCCCTTTTCTGAAAGGCATACTAAGACTGTCATTTGTGAGCCTAGTAGTAACAGGATACCTTCCGA GTTTGATTCTTCAGATGTTTCTGTCCTTTATTCCACCTGTTATGGTTATGCTTTCATCTCTGCAAGGATCCATTTCATGGAGTCTGATACAAAAAAGTGC ATGTACCAAAGTATTATTATTTTCCATATGGAACATTTTCTTCGCAAATGTACTATCGGGTTCAGCTCTTTATCGAGTGAACGTTTTTCTTGAGCCGAAA GATATTCCCAGAGTATTAGCTGAAGCTGTGCCATCACAGGCGTCATTCTTCATCGCGTATGTTGTGACAACTGGATGGACCACTATAGCATCAGAGCTCT TTCAATTGCCTAAACTTATTTTCAATTTCATAAATAGAATTTTCAGAAGAAAAATTGGTGACGGTTTTGAGCCCCCATCAATTCCTTACCATAGTGAAAT TCCGAGGATTCGTCTATTTGCTCTTCTCGGTGTAACATATTTCATCCTTGCTCCACTGATGCTGCCATTTCTCCTGGTCTACTTTTGTTTGGGATACATC ATTTACCGCAATCAGCTGCTAAAAGTATATGTGCCAAAGTATGAGACTGGAGGAGGGTATTGGCCTACAGTACACAACTCTACAATTTATTCATTGGTAC TTATGCATGTAATAGCCATCGGCATTTTCGGGTTGAAGAAGCTTCCTCTTGCATCTGCATTGACTGTTCCTCTTCCAGTTCTCACACTTCTATTCAACGA GTACTGCCAGAAACGGTTCTTACCCTTATTCAAGGACTATCCTGCCGAGTGTTTGATTAAGAAAGACAGAACAGATCAAAATGAGCAGAATATGCCAGAA TTCTATGATAAGTTAGCCAATGCCTATAATGATCCTGCTCTGTTGCCAACAAAATATTCTGAAAGTTCTGATAGTCATACCTCTCCACTACTTCATGGTT CTGCAACTTAAGTTCATAAACCGTATATTCCGATGGTGCCGCGTCGGTTGCAACTGTATAGCTGCACTCACTTTGTAACTTCCTTTCAGGTTTGATTTGG TGGTCCTTGGTGTAACATGTCTGTTGTATTGTAAATTATTTGGATTAAGAATGTAAGGTTGTAACAAGTATGGAGAAATTCAATTCTGGTATGGGTAATT AGTAATTACCATACATTTTTGGTTAGCATCATAGTGAAAAGAAAGACTATAGCTAGTTATAATTGTAACAGAGATTGGTTGGAGAAAAAAGGAGTTGTCT TTGTTAGTGCATGCATGCGGCTTGTGAGTTCCTCGAGTTCATCAAACAAATTGAGTACAAAGTAATGGATCAACTGAATAAAACTCCGGCAATGATATCT CTATTGTCCTTACTAAAATGAGCTATGAGGCTCATAGGAATGTGTTATTGAAAGTGTTGAATCAAGCCCATATCAAATTAGAAATCCAGCCAAAACTATA CAGCAATAATATG
• Tissue: flowers
• Gene name: LI_gene_49755;
• Additional information: details;

Expression of Ll_transcript_138640

FPKM

• FPAB: 0.7
• FPNAB: 0.5
• LF1: 0.6
• LF2: 0.2
• LF3: 1
• LF4: 0.7
• UF1: 0.4
• UF2: 0.1
• UF3: 0.9
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_138640

• Blastp: CSC1-like protein HYP1 from Arabidopsis with 64.58% of identity
• Blastx: CSC1-like protein HYP1 from Arabidopsis with 62.61% of identity
• Eggnog: transmembrane protein 63C(COG5594)
• Kegg: Link to kegg annotations (AT3G01100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452941.1)
• Pfam: Calcium-dependent channel, 7TM region, putative phosphate (PF02714.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;