Id Trinity | FTRINITY_DN55240_c0_g1_i8 |
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Name Transcript | Ll_transcript_138642 |
Sequence | AAAATATTATTCCATGAATTGTAGGATACGAAGTTCACTTTTCGGTATTTTATATTTGGTGCAGGCATCATTCTTCATAGCTTATGTTGTGACAACTGGA TGGACCACGATAGCATCCGAGCTCTTCCAATTGACTAAACTTGCATTCAATTTTATGAAGAGAATTTTCAGAAGAAATGGTGACGATTTTGATCCCCCGT CAATTCCTTACCACAGTGAAATTCCCAGGATTCGTCTCTTTGCTCTTTTCGGTGTAACATACTTCATCCTTGCTCCACTGATATTGCCATTTCTCCTGGT CTACTTTTGTTTGGGATACATCATTTACCGTAACCAGCTGTTAAAAGTATATGTGCCGAAGTACGAGACCGGAGGAGGGTATTGGCCTACAGTGCACAAC TCCACAATTCTGTCGTTGGTACTTATGCATGTAATAGCCATTGGGATTTTTGGGTTGAAGAAGCTTCCTCTAGCATCGGCATTGACTGTTCCTCTTCCTA TTCTCACACTCCTATTCAACGAGTATTGCCAGAAACGGTTCTTCCCCTTATTCAAGAACTATCCCGCCGAGTGTTTGATTAAGAAGGACAGAGCAGATGA TGAACACAATATGCCTGAATTTTATGATAAGTTAGCCAATGCATATATCGATCCAGCTCTGACGCCAATCAACTATTCCGAAAGGACTGATAGTCGCACC TTGCCGCTACTTCACGGTTCTGAAGCTTAAGTTCATAGAGCATATTCCTATGGGATTGTGTCAGTTGCAACTGCATAGCTTCAAAATAACAAATTAACAA TGTAATGTGCCCTCAATTTGGAACTTCCTTTAAGGTTTGATTTGTTGGTCCTTGTTGTAACATATTTGTTGTTTGATGTAGAATATTAGGATTGAGAATT TATGGTTGGAAAGAGTATGGAAAATTTTAGTACCTGTATGATTTGAAAAGCCTACTATTTTTCAAGATATTCATACCCCAAAAGAAGATCCAAACAGAAC ATGTTTCTTGATTTGACAAGCCTCAAGTGGATATCATAAAATGGTAACTAAATTGGACTTTGCTTTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_49755; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_138642
Blastp | CSC1-like protein HYP1 from Arabidopsis with 60.19% of identity |
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Blastx | CSC1-like protein HYP1 from Arabidopsis with 60.19% of identity |
Eggnog | transmembrane protein 63C(COG5594) |
Kegg | Link to kegg annotations (AT3G01100) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428753.1) |
Pfam | Calcium-dependent channel, 7TM region, putative phosphate (PF02714.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |