| Id Trinity | FTRINITY_DN55247_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_139727 |
| Sequence | CTTCTGAACGTTTCTTCTCTCTTTTCTGAAACCCGTTGGTTGAAAGTTGTTAGTGAATAATGGATTTTGATGCAGATGATTTTTTCAGAGACGATGACGA TGATCTTCATAATCAATTCTCTCTCGAAAAAGAAACAAGCAAAGAATTCGTGGTTTACCTAGTTGATGCTTCACCCAAAATGTTCACCACTACTTCTCCT TCGGAAGAAGAAGGAAAAGATGAAACTCATTTCCACATTGCTACCAGTTGTATTTCTCACTCATTGAAGTCTCAGATCATTAACAGATCCTATGATGAAA TTGCCATTTGCTTCTATAACACAAGGGAGAAGAAGAATATACAAGACTTAAATGGTGTTGTTGTATTTAATGTTGCCGAAAGAGAGTTTTTGGACAGGCC AAATGCCAGGCTCATTAAAGAATTTGACTCTATTGAGGAAACTTTTTCTAAAAACATTGGAAGCAAGCAAGGCATCGTGTCTGCGACTCGAGAAAATTCC CTCTATAATGCTATCTGGGTAGCACAAGCACTTCTTCGTAAAGGGTCAGCAAAGACAGTAGATAAGCGCATGCTTTTGTTCACAAATGAAGATGATCCTT TTGGGAGTATGAATGGGGCTATAAAATCAGACATGACAAGAACGACACTGCAGAGAGCTAAAGATGCACAGGATCTTGGCATCTCTATTGAACTTCTTCC CTTGAGTTGCCCTGACGAAGTATTCAATGTTTCTCAATTCTATGCTGATTTGATTGGGCTGGAAGGAGATCATCTTGTTGACTTTATGCCATCAGCAGGA AACAAATTGGAGGATATGAAAGATCAGCTAAGAAAACGCATGTTTACAAAGCGCATAGTCAAAAGGATTAAATTTATGATAGCGAATGGGATATCTATAG ATCTGAATTCATATGCCTTAATTCGTCCCACTGTGCCGGGAGCAATCACATGGCTTGATTCTGTTACGAATCGTCCTTTGAAGAGTGAAAGAACTTTCAT TTGTGCTGATACTGGTGCCCTGGTGGAAGAATCTTCTAGACGATTTCATCCATATAAAAAGTATGCAGTTGATTTGATGCTTATATCTTTATCTTATTTA CCATTTTGAGTGTTTTGCACTATTTTCTCAGGTATTCGTTTTTCTAAGAAGATTGGACTTCGCTAATTATAGCAACCCTACTAAGTAGGCCATCACTTTG CTCTGACAATAGGAGTTTCTTGGATGTTGATTACATTGGGTTCTATGTTGTGGGAAAATGTTCTCTATAAAAAGCAGGAAGTGAAATGACTTTATTAATT AGGAAATTCCTTTGAGTGATAATTCTTAGTCCGTTTCATTTTGGCATTATGTTCTTGATAAGGTCTCTAAGAATTTGGATAATTGGAAGGGTGTTTTTTC TGGTTGGTCTACGGTCATATTATTATATTCTGTCCTGCTTGTTTAGTGACACCTTTTATTTCTTTTCCTCAGATAGTACTTGGAGAGAATCATAGGTTGG ACAATTATTCTGGGTTTTCTGTGGTCATGGGTGAGGGTAACAATAGTGTCTTGTTATGGATAGATCTAGTTAGAATTTAGAAAATGTTTTTTTTTATTCT TACAAAAAGAAGCTAATGCTCTTTGGAATGGTTTGTTTGCATTTGTTGATGAAGTAGACTGACTACTCATAGGCAAGATTGGGGTATCAGGCTACAAATC AAACTTATGAGTTTGTTGAAGCCGAGTGCTTTATTGGACACTCACATAAATTTGCTTGCTAACTACATCTGCCTGGGGGAATACCTCGAATGCCCTTATT CTAATTTTTGAAGTTGTGTTGTTTCCTTTTGTTTTTAGTTATGATGTAACATTTATTTGTGTATATTTTTCAGCCAGAATATTACATTTTCAATGAAGGA ACTGATTGAAATTAAAAGAGTTTCTACTGGACATCTACATCTTTTAGGGTTCAAGCCACTAAATTGTTTGAGAGATTATCACAACCTGAGGCCATCAACT TTCCTTTACCCAAGTGATGAGGTTATTGTTCTTCTAGTCATCAATCAAACCATTGATTGCATTTTTAGTCATCAACAATTTTTGGTTTTAATTGCAGTTT GCCTACCTGGCACTGCTTTCTTATCCCATTCTTTTAATAGTTTAATTTTGGTAACAAATCATAATTATACCACTTTAAGCTTCCTTCAAGTTATCGTTCC ATGTTAAAGCATATGATATATCCAAATCATCAAATGAGTGCTTATACTGTCCTAGTGTCCTATTGGACAATGAAAGTTACAAAGCTCATCAATAAAAATA TCAGAAAATAATATGTCTTTTTAGGGTGAGACGCAACGCATCAGTAAGGTTGTTTCCTTGTAACTTGGAGGTTACAAGTTCAAATCCAGAAAGGCAGAGA CACCTTTGCTAGTTTGCTTGCGAGGTGAGTTTGCATAAATTTCCCTGTCCAGACCTCACCATGTGAGAGCCTAATGCACTGGGCTTCCTTTGTCCATACT GTATCAGACATTCTAAACTGTGAGCACTTAATCCTTATGACAGTTTACTTCAATACAGTTTTCTGTTGGTCTCATTAGTACAAAGGATTTTATAGTGATA ATTCTTTTGTGTTCTTACTCTGATATTCTTTCAACTTTTTGTCCTTTGCTCATGTTCTTCTTTCACCAGTTCCTCTGCCCTCAGTTTAAAACTAACATAG ATCCTTTTAATTTAGACATTTTAGAAACTTGTCTTGATTTATGGTCGAACCAAAAAACTAGTTGAAGGTGTTGATCATGTCTATCTTCCAATTTATGGTA GACAACATGAAGTGATATTCTTATATACTGACCTGTCTGTATTATGCAAAAAAATTGTGCAGTTAGTAATTGTTCCCAAGTGTATCTTATATGCTTCTCT TTTTTGTATTATTCTCTATTTATTATGTCCTTGTAATGTCTCATTTTGTTTTGCAGGGTATGGATGGTAGCATGTGTATCTTCGTTGCCCTCCATAGGTC CATGATACAGCTCAATCGGTATATTTGAAACTAAGGCTTTACATATCTGTTGAAATTGTATATGTCTAGGATCGTAAAACAGCATTTACGGACACTAGAC ACTTATTGGAAGTTAAACGAAAAGGACTCCCCCTAATAGGGAACCATAAGACAAACACATCTGAAAGAGATAACGGAAAAAATGAACCATCATATCTGTC CCAAAACCAACGAAGGAATTCCCCTCCCCAAAACCATATTTAACAAAACTTTCTGATCAAGCTTCCCAGATATCTGCATTCTCTTTTCTTTTCTCTATGA GGGGGATTTGTATAAAGCTGTAATCCATATCAAGTTAGGCAGTGTATATTTACCAGACATAAAAAGATATCAAGGTCTTCTTACTAATTTAAATAACACA TGTAGTATTGTAGGTTTTTTAATTTTAACATTGCTTATTGTTAAATAGCTTTCTGATCAAAGTAATGCATGGTGTGTCTCAGTTTTGCGCTTGCATTTTA TGGTAGTTCCTCTAGACCTCAAGTGGTTGCCCTTATTGCACAGGATGAGGTTATCCAATCAGGTGGTCAGATTGAGCCGCCTGGAATTCACATGATTTAT CTTCCATATTCTGATGACATCAGACTTATTGAAGAGGTAGGGGGCTGCAATTGTTGGACTAATGTTTAAACTTAAAATGTTATAGTATAGAATAAGCATA CA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49787; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_139727
| Blastp | ATP-dependent DNA helicase 2 subunit KU70 from Arabidopsis with 68.99% of identity |
|---|---|
| Blastx | ATP-dependent DNA helicase 2 subunit KU70 from Arabidopsis with 69.6% of identity |
| Eggnog | X-ray repair complementing defective repair in Chinese hamster cells 6(ENOG410XNXU) |
| Kegg | Link to kegg annotations (AT1G16970) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441578.1) |
| Pfam | Ku70/Ku80 N-terminal alpha/beta domain (PF03731.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |